FFCP PHASE1:Mm9::chr12:50484072..50484092,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15228|HGNC=|MCL_coexpression_id=2566|UniProt=Q60987,Q3V1Q8|association_with_transcript=78bp_to_ENSMUST00000021333,NM_008241,uc007nmf.2_5end|description=CAGE_peak_4_at_Foxg1_5end|id=chr12:50484072..50484092,+|ontology_enrichment_celltype=CL:0002609!7.02e-08!6;CL:0000055!1.07e-07!50;CL:0000221!4.63e-07!44;CL:0000133!4.63e-07!44|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-14,6;CL:0000192,1.07e-09,3;CL:0000359,1.07e-09,3;CL:0002539,1.07e-09,3;CL:0000514,1.07e-09,3;CL:0002608,4.31e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!4.26e-26!29;UBERON:0003528!4.26e-26!29;UBERON:0001893!4.26e-26!29;UBERON:0000956!3.20e-25!21;UBERON:0001869!3.20e-25!21;UBERON:0000203!3.20e-25!21;UBERON:0002020!6.98e-21!34;UBERON:0002619!1.28e-20!17;UBERON:0002780!3.24e-20!39;UBERON:0001890!3.24e-20!39;UBERON:0006240!3.24e-20!39;UBERON:0003080!1.82e-19!40;UBERON:0000955!7.23e-19!50;UBERON:0006238!7.23e-19!50;UBERON:0002616!5.91e-18!49;UBERON:0001017!2.29e-16!73;UBERON:0005743!2.29e-16!73;UBERON:0000073!1.34e-15!75;UBERON:0001016!1.34e-15!75;UBERON:0003056!3.72e-15!49;UBERON:0000033!1.43e-14!63;UBERON:0001049!6.00e-14!52;UBERON:0005068!6.00e-14!52;UBERON:0006241!6.00e-14!52;UBERON:0007135!6.00e-14!52;UBERON:0007811!2.19e-13!86;UBERON:0002021!6.05e-13!10;UBERON:0000411!6.05e-13!10;UBERON:0001950!6.05e-13!10;UBERON:0000153!3.29e-11!94;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0001954!4.65e-09!7;UBERON:0003022!4.65e-09!7;UBERON:0002421!4.65e-09!7;UBERON:0000349!4.65e-09!7;UBERON:0002600!4.65e-09!7;UBERON:0002346!1.92e-08!71;UBERON:0003075!1.92e-08!71;UBERON:0007284!1.92e-08!71;UBERON:0000064!8.26e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.57e-42,21;UBERON:0001869,2.57e-42,21;UBERON:0000203,2.57e-42,21;UBERON:0003528,4.90e-40,29;UBERON:0002791,4.90e-40,29;UBERON:0001893,4.90e-40,29;UBERON:0002020,2.08e-33,34;UBERON:0002619,7.43e-33,17;UBERON:0002780,2.98e-31,39;UBERON:0001890,2.98e-31,39;UBERON:0006240,2.98e-31,39;UBERON:0003080,2.43e-30,40;UBERON:0000955,2.03e-27,47;UBERON:0006238,2.03e-27,47;UBERON:0002616,1.05e-25,46;UBERON:0003056,8.24e-24,49;UBERON:0001049,3.90e-22,52;UBERON:0005068,3.90e-22,52;UBERON:0006241,3.90e-22,52;UBERON:0007135,3.90e-22,52;UBERON:0000073,4.01e-21,54;UBERON:0002021,6.00e-21,10;UBERON:0000411,6.00e-21,10;UBERON:0001950,6.00e-21,10;UBERON:0001017,7.74e-19,73;UBERON:0001016,3.49e-18,75;UBERON:0002346,5.23e-17,64;UBERON:0003075,5.23e-17,64;UBERON:0007284,5.23e-17,64;UBERON:0010371,2.86e-14,73;UBERON:0001954,3.59e-13,7;UBERON:0003022,3.59e-13,7;UBERON:0002421,3.59e-13,7;UBERON:0000349,3.59e-13,7;UBERON:0002600,3.59e-13,7;UBERON:0004121,3.73e-13,95;UBERON:0000924,3.73e-13,95;UBERON:0006601,3.73e-13,95;UBERON:0000025,1.80e-10,114;UBERON:0010314,2.94e-10,92;UBERON:0001135,1.07e-09,3;UBERON:0004237,1.07e-09,3;UBERON:0004695,1.07e-09,3;UBERON:0002111,1.07e-09,3;UBERON:0004178,1.07e-09,3;UBERON:0004111,2.09e-09,122;UBERON:0000947,2.40e-07,4;UBERON:0001637,2.40e-07,4;UBERON:0004573,2.40e-07,4;UBERON:0003509,2.40e-07,4;UBERON:0004571,2.40e-07,4;UBERON:0010191,2.40e-07,4;UBERON:0004572,2.40e-07,4;UBERON:0000119,9.32e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66535680890098,8.41428529121971,7.70896359079063,0,0.65407546914134,1.5378032791413,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0,0,0,1.0165335962074,0,0,0,0,1.19840044207362,0.384218305321555,2.28117147078651,2.8351247049655,1.26194976810829,0,0,1.95985278743926,1.72521847832825,1.83843757322004,0,0.638436690425939,0.307213066512487,0.263772575460388,0,0,0,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0,1.02258193546835,0.779358013808606,0.70667914902068,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74500361691176,3.39266750704734,3.82413504423008,2.81287003063364,0.41557608911912,1.29793010454206,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,5.86556290561921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0,0,2.29508923527346,0,0,0,0,0,0.222798674082394,0,1.21443210502468,0.876767573733936,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0.443068581523732,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,5.64751842617067,5.06357760157895,4.01026859407578,1.71853182343688,2.05524755931193,3.0215755895588,0.675022500231806,3.15224842256954,4.53142408984205,3.62432218226274,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p4@Foxg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15228 | |||
|HGNC= | |||
|MCL_coexpression_id=2566 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q60987,uniprot:Q3V1Q8 | |||
|association_with_transcript=78bp_to_ENSMUST00000021333,NM_008241,uc007nmf.2_5end | |||
|cluster_id=chr12:50484072..50484092,+ | |||
|description=CAGE_peak_4_at_Foxg1_5end | |||
|id=chr12:50484072..50484092,+ | |||
|ontology_enrichment_celltype=CL:0002609!7.02e-08!6;CL:0000055!1.07e-07!50;CL:0000221!4.63e-07!44;CL:0000133!4.63e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-14,6;CL:0000192,1.07e-09,3;CL:0000359,1.07e-09,3;CL:0002539,1.07e-09,3;CL:0000514,1.07e-09,3;CL:0002608,4.31e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!4.26e-26!29;UBERON:0003528!4.26e-26!29;UBERON:0001893!4.26e-26!29;UBERON:0000956!3.20e-25!21;UBERON:0001869!3.20e-25!21;UBERON:0000203!3.20e-25!21;UBERON:0002020!6.98e-21!34;UBERON:0002619!1.28e-20!17;UBERON:0002780!3.24e-20!39;UBERON:0001890!3.24e-20!39;UBERON:0006240!3.24e-20!39;UBERON:0003080!1.82e-19!40;UBERON:0000955!7.23e-19!50;UBERON:0006238!7.23e-19!50;UBERON:0002616!5.91e-18!49;UBERON:0001017!2.29e-16!73;UBERON:0005743!2.29e-16!73;UBERON:0000073!1.34e-15!75;UBERON:0001016!1.34e-15!75;UBERON:0003056!3.72e-15!49;UBERON:0000033!1.43e-14!63;UBERON:0001049!6.00e-14!52;UBERON:0005068!6.00e-14!52;UBERON:0006241!6.00e-14!52;UBERON:0007135!6.00e-14!52;UBERON:0007811!2.19e-13!86;UBERON:0002021!6.05e-13!10;UBERON:0000411!6.05e-13!10;UBERON:0001950!6.05e-13!10;UBERON:0000153!3.29e-11!94;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0001954!4.65e-09!7;UBERON:0003022!4.65e-09!7;UBERON:0002421!4.65e-09!7;UBERON:0000349!4.65e-09!7;UBERON:0002600!4.65e-09!7;UBERON:0002346!1.92e-08!71;UBERON:0003075!1.92e-08!71;UBERON:0007284!1.92e-08!71;UBERON:0000064!8.26e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.57e-42,21;UBERON:0001869,2.57e-42,21;UBERON:0000203,2.57e-42,21;UBERON:0003528,4.90e-40,29;UBERON:0002791,4.90e-40,29;UBERON:0001893,4.90e-40,29;UBERON:0002020,2.08e-33,34;UBERON:0002619,7.43e-33,17;UBERON:0002780,2.98e-31,39;UBERON:0001890,2.98e-31,39;UBERON:0006240,2.98e-31,39;UBERON:0003080,2.43e-30,40;UBERON:0000955,2.03e-27,47;UBERON:0006238,2.03e-27,47;UBERON:0002616,1.05e-25,46;UBERON:0003056,8.24e-24,49;UBERON:0001049,3.90e-22,52;UBERON:0005068,3.90e-22,52;UBERON:0006241,3.90e-22,52;UBERON:0007135,3.90e-22,52;UBERON:0000073,4.01e-21,54;UBERON:0002021,6.00e-21,10;UBERON:0000411,6.00e-21,10;UBERON:0001950,6.00e-21,10;UBERON:0001017,7.74e-19,73;UBERON:0001016,3.49e-18,75;UBERON:0002346,5.23e-17,64;UBERON:0003075,5.23e-17,64;UBERON:0007284,5.23e-17,64;UBERON:0010371,2.86e-14,73;UBERON:0001954,3.59e-13,7;UBERON:0003022,3.59e-13,7;UBERON:0002421,3.59e-13,7;UBERON:0000349,3.59e-13,7;UBERON:0002600,3.59e-13,7;UBERON:0004121,3.73e-13,95;UBERON:0000924,3.73e-13,95;UBERON:0006601,3.73e-13,95;UBERON:0000025,1.80e-10,114;UBERON:0010314,2.94e-10,92;UBERON:0001135,1.07e-09,3;UBERON:0004237,1.07e-09,3;UBERON:0004695,1.07e-09,3;UBERON:0002111,1.07e-09,3;UBERON:0004178,1.07e-09,3;UBERON:0004111,2.09e-09,122;UBERON:0000947,2.40e-07,4;UBERON:0001637,2.40e-07,4;UBERON:0004573,2.40e-07,4;UBERON:0003509,2.40e-07,4;UBERON:0004571,2.40e-07,4;UBERON:0010191,2.40e-07,4;UBERON:0004572,2.40e-07,4;UBERON:0000119,9.32e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66535680890098,8.41428529121971,7.70896359079063,0,0.65407546914134,1.5378032791413,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0,0,0,1.0165335962074,0,0,0,0,1.19840044207362,0.384218305321555,2.28117147078651,2.8351247049655,1.26194976810829,0,0,1.95985278743926,1.72521847832825,1.83843757322004,0,0.638436690425939,0.307213066512487,0.263772575460388,0,0,0,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0,1.02258193546835,0.779358013808606,0.70667914902068,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74500361691176,3.39266750704734,3.82413504423008,2.81287003063364,0.41557608911912,1.29793010454206,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,5.86556290561921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0,0,2.29508923527346,0,0,0,0,0,0.222798674082394,0,1.21443210502468,0.876767573733936,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0.443068581523732,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,5.64751842617067,5.06357760157895,4.01026859407578,1.71853182343688,2.05524755931193,3.0215755895588,0.675022500231806,3.15224842256954,4.53142408984205,3.62432218226274,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Foxg1 | |||
}} |
Revision as of 01:59, 5 August 2015
Short description: | p4@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2566 |
Association with transcript: | 78bp_to_ENSMUST00000021333, NM_008241, uc007nmf.2_5end |
EntrezGene: | 15228 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.14e-14 | 6 |
smooth muscle cell | 1.07e-09 | 3 |
vascular associated smooth muscle cell | 1.07e-09 | 3 |
aortic smooth muscle cell | 1.07e-09 | 3 |
smooth muscle myoblast | 1.07e-09 | 3 |
hippocampal neuron | 4.31e-08 | 3 |