FFCP PHASE1:Mm9::chr9:43915755..43915801,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=286|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:43915755..43915801,+|id=chr9:43915755..43915801,+|ontology_enrichment_celltype=CL:0002453!2.45e-08!8|ontology_enrichment_celltype_v019_2=CL:0002453,9.38e-29,8;CL:0000333,9.15e-23,10;CL:0000095,9.15e-23,10;CL:0000243,9.15e-23,10;CL:0000123,9.15e-23,10;CL:0000125,9.15e-23,10;CL:0000030,9.15e-23,10;CL:0000339,9.15e-23,10;CL:0000128,7.24e-22,6;CL:0000126,7.24e-22,6;CL:0000127,7.24e-22,6;CL:0000680,5.99e-14,6;CL:0000187,5.99e-14,6;CL:0000056,5.99e-14,6;CL:0000222,6.26e-12,7;CL:0000192,8.39e-11,3;CL:0000359,8.39e-11,3;CL:0002539,8.39e-11,3;CL:0000514,8.39e-11,3;CL:0000355,3.13e-09,9;CL:0000219,8.90e-09,54;CL:0002605,1.07e-08,2;CL:0002604,1.07e-08,2;CL:0002603,1.07e-08,2;CL:0000878,1.77e-08,2;CL:0000129,1.77e-08,2;CL:0002321,1.78e-08,70;CL:0000708,4.00e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.39e-11,3;UBERON:0004237,8.39e-11,3;UBERON:0004695,8.39e-11,3;UBERON:0002111,8.39e-11,3;UBERON:0004178,8.39e-11,3;UBERON:0001134,3.13e-09,9;UBERON:0002036,3.13e-09,9;UBERON:0002385,3.13e-09,9;UBERON:0000486,3.13e-09,9;UBERON:0007503,3.13e-09,9;UBERON:0001015,3.13e-09,9;UBERON:0002329,3.13e-09,9;UBERON:0003082,3.13e-09,9;UBERON:0003059,3.13e-09,9;UBERON:0007282,3.13e-09,9;UBERON:0004290,3.13e-09,9;UBERON:0009618,3.13e-09,9;UBERON:0000383,2.77e-08,10;UBERON:0000947,3.24e-08,4;UBERON:0001637,3.24e-08,4;UBERON:0004573,3.24e-08,4;UBERON:0003509,3.24e-08,4;UBERON:0004571,3.24e-08,4;UBERON:0010191,3.24e-08,4;UBERON:0004572,3.24e-08,4;UBERON:0003210,4.00e-08,2;UBERON:0007524,1.65e-07,11;UBERON:0003077,1.65e-07,11;UBERON:0007285,1.65e-07,11|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.02753862439029,1.65192076945513,54.7673941043627,8.28495594245697,18.2339531669612,18.2764105129826,5.17949760013841,1.43752564364972,0,0,0,0.771778308107841,2.29226751951005,1.54701627683233,0.202316460859598,0,0,2.37191172448392,5.33576877666684,0,0,0.7104801149461,6.5912024314049,6.14749288514487,0,0,0,0.571301968807607,0.220868540951614,0,0,0,2.20231761998777,0.383062014255563,0.153606533256243,0,0,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,2.38602451609281,1.55871602761721,1.06001872353102,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.117588707135705,0.502666365318702,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.305518091550949,0.995255764880744,0,0,0,0,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0.258703370739016,0,0,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.35163505977661,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,1.87737366450968,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.596861720015682,0.984845398470368,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0,0,0,0.129159823477731,0,0,0,0.104859344425711,2.65742532908607,1.44015003128933,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,4.69206188627955,0,0,0,0,0,1.14579102687879,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.64183841918363,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0.818462086339379,0,0.385813221962283,0.499621155875892,0.701794825336225,0.429742108096597,0,0.441182838239031,0.927471342481686|short_description=p@chr9:43915755..43915801,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:43915755..43915801,+ | |||
|description=CAGE_peak_at_chr9:43915755..43915801,+ | |||
|id=chr9:43915755..43915801,+ | |||
|ontology_enrichment_celltype=CL:0002453!2.45e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.38e-29,8;CL:0000333,9.15e-23,10;CL:0000095,9.15e-23,10;CL:0000243,9.15e-23,10;CL:0000123,9.15e-23,10;CL:0000125,9.15e-23,10;CL:0000030,9.15e-23,10;CL:0000339,9.15e-23,10;CL:0000128,7.24e-22,6;CL:0000126,7.24e-22,6;CL:0000127,7.24e-22,6;CL:0000680,5.99e-14,6;CL:0000187,5.99e-14,6;CL:0000056,5.99e-14,6;CL:0000222,6.26e-12,7;CL:0000192,8.39e-11,3;CL:0000359,8.39e-11,3;CL:0002539,8.39e-11,3;CL:0000514,8.39e-11,3;CL:0000355,3.13e-09,9;CL:0000219,8.90e-09,54;CL:0002605,1.07e-08,2;CL:0002604,1.07e-08,2;CL:0002603,1.07e-08,2;CL:0000878,1.77e-08,2;CL:0000129,1.77e-08,2;CL:0002321,1.78e-08,70;CL:0000708,4.00e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.39e-11,3;UBERON:0004237,8.39e-11,3;UBERON:0004695,8.39e-11,3;UBERON:0002111,8.39e-11,3;UBERON:0004178,8.39e-11,3;UBERON:0001134,3.13e-09,9;UBERON:0002036,3.13e-09,9;UBERON:0002385,3.13e-09,9;UBERON:0000486,3.13e-09,9;UBERON:0007503,3.13e-09,9;UBERON:0001015,3.13e-09,9;UBERON:0002329,3.13e-09,9;UBERON:0003082,3.13e-09,9;UBERON:0003059,3.13e-09,9;UBERON:0007282,3.13e-09,9;UBERON:0004290,3.13e-09,9;UBERON:0009618,3.13e-09,9;UBERON:0000383,2.77e-08,10;UBERON:0000947,3.24e-08,4;UBERON:0001637,3.24e-08,4;UBERON:0004573,3.24e-08,4;UBERON:0003509,3.24e-08,4;UBERON:0004571,3.24e-08,4;UBERON:0010191,3.24e-08,4;UBERON:0004572,3.24e-08,4;UBERON:0003210,4.00e-08,2;UBERON:0007524,1.65e-07,11;UBERON:0003077,1.65e-07,11;UBERON:0007285,1.65e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.02753862439029,1.65192076945513,54.7673941043627,8.28495594245697,18.2339531669612,18.2764105129826,5.17949760013841,1.43752564364972,0,0,0,0.771778308107841,2.29226751951005,1.54701627683233,0.202316460859598,0,0,2.37191172448392,5.33576877666684,0,0,0.7104801149461,6.5912024314049,6.14749288514487,0,0,0,0.571301968807607,0.220868540951614,0,0,0,2.20231761998777,0.383062014255563,0.153606533256243,0,0,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,2.38602451609281,1.55871602761721,1.06001872353102,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.117588707135705,0.502666365318702,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.305518091550949,0.995255764880744,0,0,0,0,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0.258703370739016,0,0,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.35163505977661,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,1.87737366450968,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.596861720015682,0.984845398470368,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0,0,0,0.129159823477731,0,0,0,0.104859344425711,2.65742532908607,1.44015003128933,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,4.69206188627955,0,0,0,0,0,1.14579102687879,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.64183841918363,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0.818462086339379,0,0.385813221962283,0.499621155875892,0.701794825336225,0.429742108096597,0,0.441182838239031,0.927471342481686 | |||
|short_description=p@chr9:43915755..43915801,+ | |||
}} |
Latest revision as of 03:39, 5 August 2015
Short description: | p@chr9:43915755..43915801, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:43915755..43915801, + |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.38e-29 | 8 |
migratory neural crest cell | 9.15e-23 | 10 |
neuron associated cell | 9.15e-23 | 10 |
glial cell (sensu Vertebrata) | 9.15e-23 | 10 |
neuron associated cell (sensu Vertebrata) | 9.15e-23 | 10 |
glial cell | 9.15e-23 | 10 |
glioblast | 9.15e-23 | 10 |
glioblast (sensu Vertebrata) | 9.15e-23 | 10 |
oligodendrocyte | 7.24e-22 | 6 |
macroglial cell | 7.24e-22 | 6 |
astrocyte | 7.24e-22 | 6 |
muscle precursor cell | 5.99e-14 | 6 |
muscle cell | 5.99e-14 | 6 |
myoblast | 5.99e-14 | 6 |
mesodermal cell | 6.26e-12 | 7 |
smooth muscle cell | 8.39e-11 | 3 |
vascular associated smooth muscle cell | 8.39e-11 | 3 |
aortic smooth muscle cell | 8.39e-11 | 3 |
smooth muscle myoblast | 8.39e-11 | 3 |
multi-potent skeletal muscle stem cell | 3.13e-09 | 9 |
motile cell | 8.90e-09 | 54 |
astrocyte of the cerebral cortex | 1.07e-08 | 2 |
astrocyte of the hippocampus | 1.07e-08 | 2 |
astrocyte of the cerebellum | 1.07e-08 | 2 |
central nervous system macrophage | 1.77e-08 | 2 |
microglial cell | 1.77e-08 | 2 |
embryonic cell | 1.78e-08 | 70 |
leptomeningeal cell | 4.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 8.39e-11 | 3 |
blood vessel smooth muscle | 8.39e-11 | 3 |
arterial system smooth muscle | 8.39e-11 | 3 |
artery smooth muscle tissue | 8.39e-11 | 3 |
aorta smooth muscle tissue | 8.39e-11 | 3 |
skeletal muscle tissue | 3.13e-09 | 9 |
striated muscle tissue | 3.13e-09 | 9 |
muscle tissue | 3.13e-09 | 9 |
multilaminar epithelium | 3.13e-09 | 9 |
epithelial vesicle | 3.13e-09 | 9 |
musculature | 3.13e-09 | 9 |
somite | 3.13e-09 | 9 |
myotome | 3.13e-09 | 9 |
presomitic mesoderm | 3.13e-09 | 9 |
presumptive segmental plate | 3.13e-09 | 9 |
dermomyotome | 3.13e-09 | 9 |
trunk paraxial mesoderm | 3.13e-09 | 9 |
musculature of body | 2.77e-08 | 10 |
aorta | 3.24e-08 | 4 |
artery | 3.24e-08 | 4 |
systemic artery | 3.24e-08 | 4 |
arterial blood vessel | 3.24e-08 | 4 |
systemic arterial system | 3.24e-08 | 4 |
aortic system | 3.24e-08 | 4 |
arterial system | 3.24e-08 | 4 |
blood-cerebrospinal fluid barrier | 4.00e-08 | 2 |
dense mesenchyme tissue | 1.65e-07 | 11 |
paraxial mesoderm | 1.65e-07 | 11 |
presumptive paraxial mesoderm | 1.65e-07 | 11 |