Personal tools

FFCP PHASE1:Mm9::chr11:102211495..102211513,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:102211495..102211513,-|id=chr11:102211495..102211513,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.48e-08,3;CL:0002006,1.48e-08,3;CL:0002024,1.48e-08,3;CL:0000050,8.29e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.99e-08!49;UBERON:0005173!4.99e-08!49;UBERON:0002417!4.99e-08!49;UBERON:0000916!4.99e-08!49;UBERON:0002106!4.68e-07!6;UBERON:0004457!4.68e-07!6;UBERON:0000042!4.68e-07!6;UBERON:0004854!4.68e-07!6;UBERON:0009034!4.68e-07!6;UBERON:0002095!4.68e-07!6;UBERON:0004782!4.68e-07!6;UBERON:0003281!4.68e-07!6;UBERON:0009664!4.68e-07!6;UBERON:0002296!4.68e-07!6;UBERON:0005602!4.68e-07!6;UBERON:0001179!4.68e-07!6;UBERON:0006293!4.68e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.11e-15,6;UBERON:0004457,8.11e-15,6;UBERON:0000042,8.11e-15,6;UBERON:0004854,8.11e-15,6;UBERON:0009034,8.11e-15,6;UBERON:0002095,8.11e-15,6;UBERON:0004782,8.11e-15,6;UBERON:0003281,8.11e-15,6;UBERON:0009664,8.11e-15,6;UBERON:0002296,8.11e-15,6;UBERON:0005602,8.11e-15,6;UBERON:0001179,8.11e-15,6;UBERON:0006293,8.11e-15,6;UBERON:0005172,1.91e-12,49;UBERON:0005173,1.91e-12,49;UBERON:0002417,1.91e-12,49;UBERON:0000916,1.91e-12,49;UBERON:0002107,1.12e-11,22;UBERON:0007499,1.12e-11,22;UBERON:0006925,1.12e-11,22;UBERON:0009497,1.12e-11,22;UBERON:0000015,1.12e-11,22;UBERON:0002423,1.12e-11,22;UBERON:0006235,1.12e-11,22;UBERON:0008835,1.12e-11,22;UBERON:0003894,1.12e-11,22;UBERON:0004161,1.12e-11,22;UBERON:0008836,1.12e-11,22;UBERON:0003887,2.00e-11,10;UBERON:0009854,4.58e-11,23;UBERON:0009856,4.58e-11,23;UBERON:0002365,5.47e-10,25;UBERON:0002330,5.47e-10,25;UBERON:0009569,3.84e-08,66|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,6.99530499812892,10.5287139042709,18.1886088313318,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,3.81018404075779,3.07532393792285,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,0.352766121407114,0,0,0,5.30766331169925,0.485300549842228,2.65009822152472,3.39412677194655,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,2.98576729464223,0,0,0,0,0,0.30140963567143,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0,0,0.462801338662135,0.232533944750408,0,0,0,0,0.243206428637567,0.584799949701329,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.627994911365499,0,0,4.83850806576673,3.93117990226406,11.4679677316275,8.11440485554012,10.8529721888588,18.3330613282622,7.76779571117189,5.67473293712624,8.23684239564244,8.62609239164127,1.11642284300551,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,8.37267315909478,2.06386867963222,2.22233432843654,20.9088987275207,7.79157098009843,14.1842467388044,0,0,0,0,0.316335993581135,0,0,0,0.436725127492355,0.404593039154462,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.19513524027894,2.18796045361465,1.46729213839588,0,1.55572709461131,0.824140228955577,0.64183841918363,1.26348605881899,1.52087579934144,0.565879024158229,0.842773567228942,0.832326981263301,0.516919220600519,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.735994600671987,1.71434626192708,0.887379030796687,0.715308569841963,0.436039249896986,0.564656282491984,0.676916863133412,1.28049581010941,0.526139422875686,1.35804113845862,0,0.711810108745045,0.788035859004508,1.22769312950907,0.464810523557898,0.771626443924566,0,0.467863216890817,0,0.191288332068843,1.98532277207564,0.695603506861264|short_description=p@chr11:102211495..102211513,-}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr11:102211495..102211513,-
|description=CAGE_peak_at_chr11:102211495..102211513,-
|id=chr11:102211495..102211513,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,1.48e-08,3;CL:0002006,1.48e-08,3;CL:0002024,1.48e-08,3;CL:0000050,8.29e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!4.99e-08!49;UBERON:0005173!4.99e-08!49;UBERON:0002417!4.99e-08!49;UBERON:0000916!4.99e-08!49;UBERON:0002106!4.68e-07!6;UBERON:0004457!4.68e-07!6;UBERON:0000042!4.68e-07!6;UBERON:0004854!4.68e-07!6;UBERON:0009034!4.68e-07!6;UBERON:0002095!4.68e-07!6;UBERON:0004782!4.68e-07!6;UBERON:0003281!4.68e-07!6;UBERON:0009664!4.68e-07!6;UBERON:0002296!4.68e-07!6;UBERON:0005602!4.68e-07!6;UBERON:0001179!4.68e-07!6;UBERON:0006293!4.68e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.11e-15,6;UBERON:0004457,8.11e-15,6;UBERON:0000042,8.11e-15,6;UBERON:0004854,8.11e-15,6;UBERON:0009034,8.11e-15,6;UBERON:0002095,8.11e-15,6;UBERON:0004782,8.11e-15,6;UBERON:0003281,8.11e-15,6;UBERON:0009664,8.11e-15,6;UBERON:0002296,8.11e-15,6;UBERON:0005602,8.11e-15,6;UBERON:0001179,8.11e-15,6;UBERON:0006293,8.11e-15,6;UBERON:0005172,1.91e-12,49;UBERON:0005173,1.91e-12,49;UBERON:0002417,1.91e-12,49;UBERON:0000916,1.91e-12,49;UBERON:0002107,1.12e-11,22;UBERON:0007499,1.12e-11,22;UBERON:0006925,1.12e-11,22;UBERON:0009497,1.12e-11,22;UBERON:0000015,1.12e-11,22;UBERON:0002423,1.12e-11,22;UBERON:0006235,1.12e-11,22;UBERON:0008835,1.12e-11,22;UBERON:0003894,1.12e-11,22;UBERON:0004161,1.12e-11,22;UBERON:0008836,1.12e-11,22;UBERON:0003887,2.00e-11,10;UBERON:0009854,4.58e-11,23;UBERON:0009856,4.58e-11,23;UBERON:0002365,5.47e-10,25;UBERON:0002330,5.47e-10,25;UBERON:0009569,3.84e-08,66
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,6.99530499812892,10.5287139042709,18.1886088313318,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,3.81018404075779,3.07532393792285,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,0.352766121407114,0,0,0,5.30766331169925,0.485300549842228,2.65009822152472,3.39412677194655,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,2.98576729464223,0,0,0,0,0,0.30140963567143,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0,0,0.462801338662135,0.232533944750408,0,0,0,0,0.243206428637567,0.584799949701329,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.627994911365499,0,0,4.83850806576673,3.93117990226406,11.4679677316275,8.11440485554012,10.8529721888588,18.3330613282622,7.76779571117189,5.67473293712624,8.23684239564244,8.62609239164127,1.11642284300551,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,8.37267315909478,2.06386867963222,2.22233432843654,20.9088987275207,7.79157098009843,14.1842467388044,0,0,0,0,0.316335993581135,0,0,0,0.436725127492355,0.404593039154462,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.19513524027894,2.18796045361465,1.46729213839588,0,1.55572709461131,0.824140228955577,0.64183841918363,1.26348605881899,1.52087579934144,0.565879024158229,0.842773567228942,0.832326981263301,0.516919220600519,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.735994600671987,1.71434626192708,0.887379030796687,0.715308569841963,0.436039249896986,0.564656282491984,0.676916863133412,1.28049581010941,0.526139422875686,1.35804113845862,0,0.711810108745045,0.788035859004508,1.22769312950907,0.464810523557898,0.771626443924566,0,0.467863216890817,0,0.191288332068843,1.98532277207564,0.695603506861264
|short_description=p@chr11:102211495..102211513,-
}}

Latest revision as of 05:18, 5 August 2015

Short description:p@chr11:102211495..102211513, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:102211495..102211513, -
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data