FFCP PHASE1:Mm9::chr11:103032041..103032054,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=57778|HGNC=|MCL_coexpression_id=7|UniProt=Q9JL26|association_with_transcript=-366bp_to_ENSMUST00000042286_5end|description=CAGE_peak_8_at_Fmnl1_5end|id=chr11:103032041..103032054,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.53e-12!23;UBERON:0000974!2.53e-12!23;UBERON:0004807!2.53e-12!23;UBERON:0005058!2.53e-12!23;UBERON:0003351!2.53e-12!23;UBERON:0009113!2.53e-12!23;UBERON:0003295!2.53e-12!23;UBERON:0009722!2.53e-12!23;UBERON:0005562!2.53e-12!23;UBERON:0007690!2.53e-12!23;UBERON:0006562!1.40e-11!24;UBERON:0003408!1.40e-11!24;UBERON:0001557!1.40e-11!24;UBERON:0001042!1.40e-11!24;UBERON:0008814!1.40e-11!24;UBERON:0009145!1.40e-11!24;UBERON:0007811!1.79e-10!86;UBERON:0004177!1.06e-09!29;UBERON:0000072!1.07e-09!27;UBERON:0000153!1.20e-08!94;UBERON:0002240!1.36e-07!6;UBERON:0005174!1.36e-07!6;UBERON:0001137!1.36e-07!6;UBERON:0000063!2.55e-07!35;UBERON:0001948!5.58e-07!5;UBERON:0002315!5.58e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.37e-15,23;UBERON:0000974,2.37e-15,23;UBERON:0004807,2.37e-15,23;UBERON:0005058,2.37e-15,23;UBERON:0003351,2.37e-15,23;UBERON:0009113,2.37e-15,23;UBERON:0003295,2.37e-15,23;UBERON:0009722,2.37e-15,23;UBERON:0005562,2.37e-15,23;UBERON:0007690,2.37e-15,23;UBERON:0006562,1.03e-14,24;UBERON:0003408,1.03e-14,24;UBERON:0001557,1.03e-14,24;UBERON:0001042,1.03e-14,24;UBERON:0008814,1.03e-14,24;UBERON:0009145,1.03e-14,24;UBERON:0000072,4.43e-13,27;UBERON:0004177,3.54e-12,29;UBERON:0005057,3.54e-12,29;UBERON:0000077,4.39e-10,35;UBERON:0007811,8.40e-10,36;UBERON:0000065,1.35e-08,41;UBERON:0001004,2.17e-08,42;UBERON:0000153,3.42e-08,43;UBERON:0002390,8.00e-08,45;UBERON:0003061,8.00e-08,45;UBERON:0002193,2.51e-07,48;UBERON:0002405,2.51e-07,48|phase1_expression=0,0,0,0,0,0,0,0,10.2775767170717,16.6185813688615,0.171217968225505,0.319088635981346,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0,0,0,0.15279824777681,0.589257170947335,0.711858403995515,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.359445373517761,0,0.127070227073065,0,0,0.753926112677186,0.521472960576829,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,1.18984900995699,0.279902904647316,0.829199842826543,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,1.07416017400489,0.596044064343795,0.240390899039938,1.62458479892035,1.00966449948148,1.752756553065,0.504130925684203,0.974578807397524,0.384847366561318,0.818138315270983,0,0,0,0.167884616364078,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.441596760403192,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0|short_description=p8@Fmnl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57778 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JL26 | |||
|association_with_transcript=-366bp_to_ENSMUST00000042286_5end | |||
|cluster_id=chr11:103032041..103032054,+ | |||
|description=CAGE_peak_8_at_Fmnl1_5end | |||
|id=chr11:103032041..103032054,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.53e-12!23;UBERON:0000974!2.53e-12!23;UBERON:0004807!2.53e-12!23;UBERON:0005058!2.53e-12!23;UBERON:0003351!2.53e-12!23;UBERON:0009113!2.53e-12!23;UBERON:0003295!2.53e-12!23;UBERON:0009722!2.53e-12!23;UBERON:0005562!2.53e-12!23;UBERON:0007690!2.53e-12!23;UBERON:0006562!1.40e-11!24;UBERON:0003408!1.40e-11!24;UBERON:0001557!1.40e-11!24;UBERON:0001042!1.40e-11!24;UBERON:0008814!1.40e-11!24;UBERON:0009145!1.40e-11!24;UBERON:0007811!1.79e-10!86;UBERON:0004177!1.06e-09!29;UBERON:0000072!1.07e-09!27;UBERON:0000153!1.20e-08!94;UBERON:0002240!1.36e-07!6;UBERON:0005174!1.36e-07!6;UBERON:0001137!1.36e-07!6;UBERON:0000063!2.55e-07!35;UBERON:0001948!5.58e-07!5;UBERON:0002315!5.58e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.37e-15,23;UBERON:0000974,2.37e-15,23;UBERON:0004807,2.37e-15,23;UBERON:0005058,2.37e-15,23;UBERON:0003351,2.37e-15,23;UBERON:0009113,2.37e-15,23;UBERON:0003295,2.37e-15,23;UBERON:0009722,2.37e-15,23;UBERON:0005562,2.37e-15,23;UBERON:0007690,2.37e-15,23;UBERON:0006562,1.03e-14,24;UBERON:0003408,1.03e-14,24;UBERON:0001557,1.03e-14,24;UBERON:0001042,1.03e-14,24;UBERON:0008814,1.03e-14,24;UBERON:0009145,1.03e-14,24;UBERON:0000072,4.43e-13,27;UBERON:0004177,3.54e-12,29;UBERON:0005057,3.54e-12,29;UBERON:0000077,4.39e-10,35;UBERON:0007811,8.40e-10,36;UBERON:0000065,1.35e-08,41;UBERON:0001004,2.17e-08,42;UBERON:0000153,3.42e-08,43;UBERON:0002390,8.00e-08,45;UBERON:0003061,8.00e-08,45;UBERON:0002193,2.51e-07,48;UBERON:0002405,2.51e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,10.2775767170717,16.6185813688615,0.171217968225505,0.319088635981346,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0,0,0,0.15279824777681,0.589257170947335,0.711858403995515,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.359445373517761,0,0.127070227073065,0,0,0.753926112677186,0.521472960576829,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,1.18984900995699,0.279902904647316,0.829199842826543,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,1.07416017400489,0.596044064343795,0.240390899039938,1.62458479892035,1.00966449948148,1.752756553065,0.504130925684203,0.974578807397524,0.384847366561318,0.818138315270983,0,0,0,0.167884616364078,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.441596760403192,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p8@Fmnl1 | |||
}} |
Revision as of 06:09, 5 August 2015
Short description: | p8@Fmnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Fmnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -366bp_to_ENSMUST00000042286_5end |
EntrezGene: | 57778 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.12e-07 | 6 |
double negative thymocyte | 1.12e-07 | 6 |
naive T cell | 1.12e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.12e-07 | 6 |
DN4 thymocyte | 1.12e-07 | 6 |
DN1 thymic pro-T cell | 1.12e-07 | 6 |
DN2 thymocyte | 1.12e-07 | 6 |
DN3 thymocyte | 1.12e-07 | 6 |
immature single positive thymocyte | 1.12e-07 | 6 |
early T lineage precursor | 1.12e-07 | 6 |
mature CD4 single-positive thymocyte | 1.12e-07 | 6 |
resting double-positive thymocyte | 1.12e-07 | 6 |
double-positive blast | 1.12e-07 | 6 |
CD69-positive double-positive thymocyte | 1.12e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.12e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.12e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.37e-15 | 23 |
neck | 2.37e-15 | 23 |
respiratory system epithelium | 2.37e-15 | 23 |
hemolymphoid system gland | 2.37e-15 | 23 |
pharyngeal epithelium | 2.37e-15 | 23 |
thymic region | 2.37e-15 | 23 |
pharyngeal gland | 2.37e-15 | 23 |
entire pharyngeal arch endoderm | 2.37e-15 | 23 |
thymus primordium | 2.37e-15 | 23 |
early pharyngeal endoderm | 2.37e-15 | 23 |
pharynx | 1.03e-14 | 24 |
gland of gut | 1.03e-14 | 24 |
upper respiratory tract | 1.03e-14 | 24 |
chordate pharynx | 1.03e-14 | 24 |
pharyngeal arch system | 1.03e-14 | 24 |
pharyngeal region of foregut | 1.03e-14 | 24 |
segment of respiratory tract | 4.43e-13 | 27 |
hemopoietic organ | 3.54e-12 | 29 |
immune organ | 3.54e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 4.39e-10 | 35 |
craniocervical region | 8.40e-10 | 36 |
respiratory tract | 1.35e-08 | 41 |
respiratory system | 2.17e-08 | 42 |
anterior region of body | 3.42e-08 | 43 |
hematopoietic system | 8.00e-08 | 45 |
blood island | 8.00e-08 | 45 |
hemolymphoid system | 2.51e-07 | 48 |
immune system | 2.51e-07 | 48 |