FFCP PHASE1:Mm9::chr11:104092779..104092821,+: Difference between revisions
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{{FFCP|EntrezGene=17762|HGNC=|MCL_coexpression_id=13|UniProt=P10637,B1AQW4|association_with_transcript=0bp_to_ENSMUST00000106991,ENSMUST00000106995,ENSMUST00000138384,ENSMUST00000145227_5end|description=CAGE_peak_1_at_Mapt_5end|id=chr11:104092779..104092821,+|ontology_enrichment_celltype=CL:0000540!5.87e-16!33;CL:0000047!5.87e-16!33;CL:0000031!5.87e-16!33;CL:0000404!5.87e-16!33;CL:0000117!1.74e-15!23;CL:0000337!1.74e-15!23;CL:0002319!1.22e-12!43;CL:0000221!1.29e-12!44;CL:0000133!1.29e-12!44;CL:0000393!2.50e-10!39;CL:0000211!2.50e-10!39;CL:0000055!1.98e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-16,33;CL:0000047,2.05e-16,33;CL:0000031,2.05e-16,33;CL:0000404,2.05e-16,33;CL:0000117,6.31e-16,23;CL:0000337,6.31e-16,23;CL:0002319,6.16e-13,43;CL:0000221,6.55e-13,44;CL:0000133,6.55e-13,44;CL:0000393,1.05e-10,39;CL:0000211,1.05e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.23e-27!102;UBERON:0000924!8.23e-27!102;UBERON:0006601!8.23e-27!102;UBERON:0001017!1.51e-26!73;UBERON:0005743!1.51e-26!73;UBERON:0000073!6.44e-26!75;UBERON:0001016!6.44e-26!75;UBERON:0002346!1.13e-23!71;UBERON:0003075!1.13e-23!71;UBERON:0007284!1.13e-23!71;UBERON:0001049!1.08e-20!52;UBERON:0005068!1.08e-20!52;UBERON:0006241!1.08e-20!52;UBERON:0007135!1.08e-20!52;UBERON:0000033!1.37e-20!63;UBERON:0000955!4.68e-19!50;UBERON:0006238!4.68e-19!50;UBERON:0002616!1.53e-18!49;UBERON:0002020!2.25e-17!34;UBERON:0003056!3.75e-16!49;UBERON:0003080!5.86e-15!40;UBERON:0002780!2.41e-14!39;UBERON:0001890!2.41e-14!39;UBERON:0006240!2.41e-14!39;UBERON:0002791!5.28e-14!29;UBERON:0003528!5.28e-14!29;UBERON:0001893!5.28e-14!29;UBERON:0000468!2.88e-11!333;UBERON:0000956!2.75e-09!21;UBERON:0001869!2.75e-09!21;UBERON:0000203!2.75e-09!21;UBERON:0000922!4.47e-08!328;UBERON:0007811!1.64e-07!86;UBERON:0004111!2.78e-07!122;UBERON:0002619!3.22e-07!17;UBERON:0000025!5.46e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.82e-27,73;UBERON:0001016,1.26e-26,75;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002346,3.88e-23,64;UBERON:0003075,3.88e-23,64;UBERON:0007284,3.88e-23,64;UBERON:0000073,1.38e-22,54;UBERON:0001049,3.10e-21,52;UBERON:0005068,3.10e-21,52;UBERON:0006241,3.10e-21,52;UBERON:0007135,3.10e-21,52;UBERON:0010371,1.57e-20,73;UBERON:0002020,8.38e-18,34;UBERON:0000955,1.25e-17,47;UBERON:0006238,1.25e-17,47;UBERON:0002616,4.13e-17,46;UBERON:0003056,1.48e-16,49;UBERON:0010314,4.10e-16,92;UBERON:0003080,2.54e-15,40;UBERON:0002780,1.09e-14,39;UBERON:0001890,1.09e-14,39;UBERON:0006240,1.09e-14,39;UBERON:0003528,2.50e-14,29;UBERON:0002791,2.50e-14,29;UBERON:0001893,2.50e-14,29;UBERON:0000956,1.82e-09,21;UBERON:0001869,1.82e-09,21;UBERON:0000203,1.82e-09,21;UBERON:0002619,2.45e-07,17|phase1_expression=10.089377367602,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,68.3748052814601,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,10.4652075062614,1.5378032791413,0.194429899074283,3.3596741190087,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,711.344676382346,922.560267850425,787.218603154674,0.338844532069132,0,0.449949858640699,0.988866362566974,0,30.2596111623589,34.5796474789399,235.893868001787,362.355938482258,293.823971007881,449.900300435991,435.111025674679,365.390054058208,303.446761243736,436.62892363976,392.012536357824,314.621601041903,351.451748090285,894.452803386175,854.403103602904,782.411882576253,272.482607025348,197.52967612112,254.561880796166,840.575354356374,718.834616354671,772.625702945871,2.80186915332781,5.51672388779534,2.89864488701678,6.0229671388697,0,3.2382191498269,1.29955283489534,0.448026887097336,32.0213277900394,0,0,0,12.1125341007945,0,0,0,0,0.253359865475099,0,23.0651437032501,0,34.735460541169,16.654591369549,64.5466814021739,52.5803333743813,63.1527863915489,53.7380391610171,44.4859733307051,0.741584903203122,33.6916501623394,7.07688441559899,13.2648816956876,11.9254419968613,10.1823803158397,5.59175283654366,346.945244458683,256.153322432856,2.04365644166873,0,0,0,365.938532065982,298.747893640563,633.42358900095,250.307021076878,164.425039063403,354.48640401861,230.544834819284,0.305518091550949,7.0911973247753,10.867078612648,25.0425808504904,4.55421550369463,33.565707247287,81.2080205422125,79.4214389994218,79.9428865028102,77.8931419331887,68.3085572040423,67.0041730214051,1.29340795759705,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,1.39300866608867,0.61734640922383,1.99034266818493,0,0,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.804820204198858,0.700592054203017,1.6455984991348,27.4159665012089,32.4275238183423,38.4505966928624,48.3010253640311,39.3224806967889,235.524742391823,833.218646435066,0,1.58670339998127,3.19932375802851,6.73486348395272,12.371276286921,10.48754328041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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17762 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P10637,uniprot:B1AQW4 | |||
|association_with_transcript=0bp_to_ENSMUST00000106991,ENSMUST00000106995,ENSMUST00000138384,ENSMUST00000145227_5end | |||
|cluster_id=chr11:104092779..104092821,+ | |||
|description=CAGE_peak_1_at_Mapt_5end | |||
|id=chr11:104092779..104092821,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.87e-16!33;CL:0000047!5.87e-16!33;CL:0000031!5.87e-16!33;CL:0000404!5.87e-16!33;CL:0000117!1.74e-15!23;CL:0000337!1.74e-15!23;CL:0002319!1.22e-12!43;CL:0000221!1.29e-12!44;CL:0000133!1.29e-12!44;CL:0000393!2.50e-10!39;CL:0000211!2.50e-10!39;CL:0000055!1.98e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-16,33;CL:0000047,2.05e-16,33;CL:0000031,2.05e-16,33;CL:0000404,2.05e-16,33;CL:0000117,6.31e-16,23;CL:0000337,6.31e-16,23;CL:0002319,6.16e-13,43;CL:0000221,6.55e-13,44;CL:0000133,6.55e-13,44;CL:0000393,1.05e-10,39;CL:0000211,1.05e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.23e-27!102;UBERON:0000924!8.23e-27!102;UBERON:0006601!8.23e-27!102;UBERON:0001017!1.51e-26!73;UBERON:0005743!1.51e-26!73;UBERON:0000073!6.44e-26!75;UBERON:0001016!6.44e-26!75;UBERON:0002346!1.13e-23!71;UBERON:0003075!1.13e-23!71;UBERON:0007284!1.13e-23!71;UBERON:0001049!1.08e-20!52;UBERON:0005068!1.08e-20!52;UBERON:0006241!1.08e-20!52;UBERON:0007135!1.08e-20!52;UBERON:0000033!1.37e-20!63;UBERON:0000955!4.68e-19!50;UBERON:0006238!4.68e-19!50;UBERON:0002616!1.53e-18!49;UBERON:0002020!2.25e-17!34;UBERON:0003056!3.75e-16!49;UBERON:0003080!5.86e-15!40;UBERON:0002780!2.41e-14!39;UBERON:0001890!2.41e-14!39;UBERON:0006240!2.41e-14!39;UBERON:0002791!5.28e-14!29;UBERON:0003528!5.28e-14!29;UBERON:0001893!5.28e-14!29;UBERON:0000468!2.88e-11!333;UBERON:0000956!2.75e-09!21;UBERON:0001869!2.75e-09!21;UBERON:0000203!2.75e-09!21;UBERON:0000922!4.47e-08!328;UBERON:0007811!1.64e-07!86;UBERON:0004111!2.78e-07!122;UBERON:0002619!3.22e-07!17;UBERON:0000025!5.46e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.82e-27,73;UBERON:0001016,1.26e-26,75;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002346,3.88e-23,64;UBERON:0003075,3.88e-23,64;UBERON:0007284,3.88e-23,64;UBERON:0000073,1.38e-22,54;UBERON:0001049,3.10e-21,52;UBERON:0005068,3.10e-21,52;UBERON:0006241,3.10e-21,52;UBERON:0007135,3.10e-21,52;UBERON:0010371,1.57e-20,73;UBERON:0002020,8.38e-18,34;UBERON:0000955,1.25e-17,47;UBERON:0006238,1.25e-17,47;UBERON:0002616,4.13e-17,46;UBERON:0003056,1.48e-16,49;UBERON:0010314,4.10e-16,92;UBERON:0003080,2.54e-15,40;UBERON:0002780,1.09e-14,39;UBERON:0001890,1.09e-14,39;UBERON:0006240,1.09e-14,39;UBERON:0003528,2.50e-14,29;UBERON:0002791,2.50e-14,29;UBERON:0001893,2.50e-14,29;UBERON:0000956,1.82e-09,21;UBERON:0001869,1.82e-09,21;UBERON:0000203,1.82e-09,21;UBERON:0002619,2.45e-07,17 | |||
|phase1_expression=10.089377367602,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,68.3748052814601,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,10.4652075062614,1.5378032791413,0.194429899074283,3.3596741190087,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,711.344676382346,922.560267850425,787.218603154674,0.338844532069132,0,0.449949858640699,0.988866362566974,0,30.2596111623589,34.5796474789399,235.893868001787,362.355938482258,293.823971007881,449.900300435991,435.111025674679,365.390054058208,303.446761243736,436.62892363976,392.012536357824,314.621601041903,351.451748090285,894.452803386175,854.403103602904,782.411882576253,272.482607025348,197.52967612112,254.561880796166,840.575354356374,718.834616354671,772.625702945871,2.80186915332781,5.51672388779534,2.89864488701678,6.0229671388697,0,3.2382191498269,1.29955283489534,0.448026887097336,32.0213277900394,0,0,0,12.1125341007945,0,0,0,0,0.253359865475099,0,23.0651437032501,0,34.735460541169,16.654591369549,64.5466814021739,52.5803333743813,63.1527863915489,53.7380391610171,44.4859733307051,0.741584903203122,33.6916501623394,7.07688441559899,13.2648816956876,11.9254419968613,10.1823803158397,5.59175283654366,346.945244458683,256.153322432856,2.04365644166873,0,0,0,365.938532065982,298.747893640563,633.42358900095,250.307021076878,164.425039063403,354.48640401861,230.544834819284,0.305518091550949,7.0911973247753,10.867078612648,25.0425808504904,4.55421550369463,33.565707247287,81.2080205422125,79.4214389994218,79.9428865028102,77.8931419331887,68.3085572040423,67.0041730214051,1.29340795759705,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,1.39300866608867,0.61734640922383,1.99034266818493,0,0,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.804820204198858,0.700592054203017,1.6455984991348,27.4159665012089,32.4275238183423,38.4505966928624,48.3010253640311,39.3224806967889,235.524742391823,833.218646435066,0,1.58670339998127,3.19932375802851,6.73486348395272,12.371276286921,10.4875432804138,10.6741461045538,9.3210556795154,1.89811624617805,8.39964669092456,7.54005626400809,7.16243299348143,5.8489226135736,3.59527763461689,1.08069024937347,1.59313018603494,3.41402221715547,9.36837803399776,11.270773567308,9.36796108088446,12.6069116658957,9.25792822552205,22.0063149192415,80.2999205009036,92.3152519707284,80.3315537130921,4.15033677922008,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0.763877555344259,1.15078454980324,0.324270453550071,0.274561413188081,2.87536413054709,1.11642284300551,4.36852742360385,3.28352541331245,2.15276896226295,2.8946611281802,66.8806548403109,3.97931964718018,2.44447464663039,3.22515662972857,7.97946844180907,23.618382299296,37.1348079782181,38.831595923702,25.0639879128844,23.0323277234726,21.2074842314458,76.5241679722496,51.1147546323051,58.2935706083492,0,0,1.47529281905711,1.37968373152366,345.183768473753,278.494967343075,0,54.5337202761446,38.8075109881996,44.5100168498168,69.7971808654269,33.4556317133573,45.4509295128084,58.5968418732883,55.4590661294605,77.4478023464977,87.3585989261817,204.360357244269,3.97432238583152,0.890328018336276,0.162886959353576,0.824850614862677,1.32745138339963,1.94224508923985,1.81394134178851,4.14931175462976,5.02013217897314,4.61152721915891,4.65170927702798,2.54473610634254,3.56497378384721,3.47640433729398,1.05418608574999,1.03135543248187,41.5336319019621,12.784337676223,7.76152102696527,7.07312215604255,4.61084607469911,23.9014215586775,40.1499610269175,28.3152402676577,0.938686832254841,6.35496212591461,8.60060752414351,7.91454014119104,1.93757312035087,2.83470747162333,3.22305328808468,3.28281799490123,2.33184669303881,333.765543618917,0.512612642393558,0.82554747185289,0.740778109478847,0.565105371014073,0.27338845544205,0.686334519619568,0,0.139951452323658,0,4.77335309007557,4.4287039101359,8.13277868507395,13.5006676027252,12.1271211688392,8.51613998610093,6.60835297285622,7.02554373665355,2.35580347785627,2.20345454596048,96.3075935284735,2.25477175473676,5.23307911153926,5.29467169462712,8.94475466382619,8.91202781996345,11.3200604078821,3.16864544343536,0.651021924219751,1.8874681996628,0.724752362478018,7.20075015644664,0.632022241256357,2.02725215290164,0.718976700153791,0.129920822977795,1.25318686967237,0.596044064343795,0,0.443068581523732,0.201932899896295,0.304827226619999,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,20.8591952925994,5.99362074109975,1.07656627931371,0.503653849092235,5.60249822693352,1.12609485270709,0.36630324853453,1.2862102744744,6.01886524842436,273.33989182666,220.035463050431,259.521667588047,191.788151495555,180.176702699679,176.76217198919,173.480782559574,200.843256638002,196.210663090161,232.992140288319,36.429359002046,82.1991239206124,66.2446390326041,97.728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| |||
|short_description=p1@Mapt | |||
}} |
Revision as of 06:43, 5 August 2015
Short description: | p1@Mapt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mapt_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000106991, ENSMUST00000106995, ENSMUST00000138384, ENSMUST00000145227_5end |
EntrezGene: | 17762 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.05e-16 | 33 |
neuronal stem cell | 2.05e-16 | 33 |
neuroblast | 2.05e-16 | 33 |
electrically signaling cell | 2.05e-16 | 33 |
CNS neuron (sensu Vertebrata) | 6.31e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.31e-16 | 23 |
neural cell | 6.16e-13 | 43 |
ectodermal cell | 6.55e-13 | 44 |
neurectodermal cell | 6.55e-13 | 44 |
electrically responsive cell | 1.05e-10 | 39 |
electrically active cell | 1.05e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.82e-27 | 73 |
nervous system | 1.26e-26 | 75 |
ectoderm-derived structure | 1.04e-25 | 95 |
ectoderm | 1.04e-25 | 95 |
presumptive ectoderm | 1.04e-25 | 95 |
neurectoderm | 3.88e-23 | 64 |
neural plate | 3.88e-23 | 64 |
presumptive neural plate | 3.88e-23 | 64 |
regional part of nervous system | 1.38e-22 | 54 |
neural tube | 3.10e-21 | 52 |
neural rod | 3.10e-21 | 52 |
future spinal cord | 3.10e-21 | 52 |
neural keel | 3.10e-21 | 52 |
ecto-epithelium | 1.57e-20 | 73 |
gray matter | 8.38e-18 | 34 |
brain | 1.25e-17 | 47 |
future brain | 1.25e-17 | 47 |
regional part of brain | 4.13e-17 | 46 |
pre-chordal neural plate | 1.48e-16 | 49 |
structure with developmental contribution from neural crest | 4.10e-16 | 92 |
anterior neural tube | 2.54e-15 | 40 |
regional part of forebrain | 1.09e-14 | 39 |
forebrain | 1.09e-14 | 39 |
future forebrain | 1.09e-14 | 39 |
brain grey matter | 2.50e-14 | 29 |
regional part of telencephalon | 2.50e-14 | 29 |
telencephalon | 2.50e-14 | 29 |
cerebral cortex | 1.82e-09 | 21 |
cerebral hemisphere | 1.82e-09 | 21 |
pallium | 1.82e-09 | 21 |
regional part of cerebral cortex | 2.45e-07 | 17 |