FFCP PHASE1:Mm9::chr11:106781922..106781957,-: Difference between revisions
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{{FFCP|EntrezGene=66313|HGNC=|MCL_coexpression_id=24|UniProt=A2A5Z6,Q9CSE3|association_with_transcript=71bp_to_ENSMUST00000103067,NM_025481,uc007lzx.2,uc007lzy.2_5end|description=CAGE_peak_4_at_Smurf2_5end|id=chr11:106781922..106781957,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.20e-09,6;CL:0000677,1.20e-09,6;CL:0000584,1.20e-09,6;CL:0000066,4.47e-09,25;CL:0000075,4.12e-08,7;CL:0002563,1.02e-07,9;CL:0002251,1.02e-07,9;CL:0000223,5.94e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.64e-16!130;UBERON:0000925!7.64e-16!130;UBERON:0006595!7.64e-16!130;UBERON:0001007!8.92e-16!128;UBERON:0001555!8.92e-16!128;UBERON:0007026!8.92e-16!128;UBERON:0004921!8.05e-15!126;UBERON:0004185!8.05e-15!126;UBERON:0000160!2.74e-13!43;UBERON:0005409!1.26e-11!59;UBERON:0000344!2.47e-09!15;UBERON:0001242!2.37e-08!13;UBERON:0000060!2.37e-08!13;UBERON:0001262!2.37e-08!13;UBERON:0004786!2.37e-08!13;UBERON:0005911!4.39e-07!69;UBERON:0000481!7.49e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.87e-26,116;UBERON:0001555,4.87e-26,116;UBERON:0007026,4.87e-26,116;UBERON:0000160,2.08e-25,31;UBERON:0004119,2.35e-25,118;UBERON:0000925,2.35e-25,118;UBERON:0006595,2.35e-25,118;UBERON:0004921,4.15e-24,114;UBERON:0005409,3.46e-21,47;UBERON:0000344,5.03e-15,15;UBERON:0001242,7.75e-13,13;UBERON:0001262,7.75e-13,13;UBERON:0004786,7.75e-13,13;UBERON:0005911,5.60e-11,69;UBERON:0011216,4.58e-09,194;UBERON:0002048,6.82e-09,14;UBERON:0000117,6.82e-09,14;UBERON:0000171,6.82e-09,14;UBERON:0000170,6.82e-09,14;UBERON:0005597,6.82e-09,14;UBERON:0000118,6.82e-09,14;UBERON:0004923,4.61e-08,24;UBERON:0003350,1.02e-07,9;UBERON:0004808,1.02e-07,9;UBERON:0001277,1.02e-07,9;UBERON:0005153,6.51e-07,17;UBERON:0005178,6.51e-07,17;UBERON:0005181,6.51e-07,17;UBERON:0002224,6.51e-07,17;UBERON:0000915,6.51e-07,17;UBERON:0008947,6.51e-07,17;UBERON:0003258,6.51e-07,17;UBERON:0002108,7.57e-07,4|phase1_expression=0.480446541314382,2.09385244583617,5.0049916332849,12.0985684522732,12.0214975187123,2.18243053485457,1.40167584357315,0.645616617207881,0.84473233291,1.87251621057595,0.34243593645101,0.239316476986009,1.19840510951844,1.48614684112296,0,0.202475267389826,0,0.473193248037357,0,0,0.850432901510698,0.297872853602656,0.261199789138935,1.59992422793407,1.83527424853736,4.01962374880514,4.73838195774982,2.58565479223067,3.42042155021473,2.52030129759931,1.77384408524244,0,0,0,0.866554859253824,0.997407872150954,1.02084678131185,0,0,0.523523743973798,0,0.683045484958446,0,0.755380907853464,0.709638518536602,0.367093504323363,0,0,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0.725362142011344,0,1.28629718017973,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,1.04182674111352,0,0,0.15279824777681,0,0,0,0.075726193333184,0.302286240427142,2.02905142091174,0,0,2.15881276655127,0,2.24013443548668,0.702222100658759,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,1.7127581957859,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,0,0.628340120440365,2.04365644166873,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.373220911830279,0.505445516867349,0.841767423545896,0.260240885925407,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,1.29351685369508,0.431135985865684,0.567318240503458,0,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.590292695242212,0,0.232533944750408,0,0,0.329119699826961,0.820837320395476,0.405344047729279,0.877199924551994,0.658650345873152,1.07365135008297,0.210289948564127,0.205809224758569,9.91256348951394,2.11560453330835,0.853153002140936,1.16118335930219,0.515469845288373,1.81515172161008,1.77902435075896,1.33157938278791,6.16887780007865,0.494096864172033,2.01068167040216,2.38747766449381,0.779856348476481,1.79763881730844,3.45820879799511,3.38540164532424,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0,0.561086559122548,0.442655759869801,0.442830443938806,0.627994911365499,0.493588655687202,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0,0,1.2731292589071,0.575392274901621,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,2.18426371180192,1.01031551178845,0.896987067609561,1.4473305640901,3.51031061316549,1.32643988239339,0.325929952884052,0.339490171550376,0.234690248288502,1.00503754465089,1.42826184531608,3.12213836572478,2.36452716159286,0.8858587585951,1.59454768657487,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66313 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A5Z6,uniprot:Q9CSE3 | |||
|association_with_transcript=71bp_to_ENSMUST00000103067,NM_025481,uc007lzx.2,uc007lzy.2_5end | |||
|cluster_id=chr11:106781922..106781957,- | |||
|description=CAGE_peak_4_at_Smurf2_5end | |||
|id=chr11:106781922..106781957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.20e-09,6;CL:0000677,1.20e-09,6;CL:0000584,1.20e-09,6;CL:0000066,4.47e-09,25;CL:0000075,4.12e-08,7;CL:0002563,1.02e-07,9;CL:0002251,1.02e-07,9;CL:0000223,5.94e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.64e-16!130;UBERON:0000925!7.64e-16!130;UBERON:0006595!7.64e-16!130;UBERON:0001007!8.92e-16!128;UBERON:0001555!8.92e-16!128;UBERON:0007026!8.92e-16!128;UBERON:0004921!8.05e-15!126;UBERON:0004185!8.05e-15!126;UBERON:0000160!2.74e-13!43;UBERON:0005409!1.26e-11!59;UBERON:0000344!2.47e-09!15;UBERON:0001242!2.37e-08!13;UBERON:0000060!2.37e-08!13;UBERON:0001262!2.37e-08!13;UBERON:0004786!2.37e-08!13;UBERON:0005911!4.39e-07!69;UBERON:0000481!7.49e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.87e-26,116;UBERON:0001555,4.87e-26,116;UBERON:0007026,4.87e-26,116;UBERON:0000160,2.08e-25,31;UBERON:0004119,2.35e-25,118;UBERON:0000925,2.35e-25,118;UBERON:0006595,2.35e-25,118;UBERON:0004921,4.15e-24,114;UBERON:0005409,3.46e-21,47;UBERON:0000344,5.03e-15,15;UBERON:0001242,7.75e-13,13;UBERON:0001262,7.75e-13,13;UBERON:0004786,7.75e-13,13;UBERON:0005911,5.60e-11,69;UBERON:0011216,4.58e-09,194;UBERON:0002048,6.82e-09,14;UBERON:0000117,6.82e-09,14;UBERON:0000171,6.82e-09,14;UBERON:0000170,6.82e-09,14;UBERON:0005597,6.82e-09,14;UBERON:0000118,6.82e-09,14;UBERON:0004923,4.61e-08,24;UBERON:0003350,1.02e-07,9;UBERON:0004808,1.02e-07,9;UBERON:0001277,1.02e-07,9;UBERON:0005153,6.51e-07,17;UBERON:0005178,6.51e-07,17;UBERON:0005181,6.51e-07,17;UBERON:0002224,6.51e-07,17;UBERON:0000915,6.51e-07,17;UBERON:0008947,6.51e-07,17;UBERON:0003258,6.51e-07,17;UBERON:0002108,7.57e-07,4 | |||
|phase1_expression=0.480446541314382,2.09385244583617,5.0049916332849,12.0985684522732,12.0214975187123,2.18243053485457,1.40167584357315,0.645616617207881,0.84473233291,1.87251621057595,0.34243593645101,0.239316476986009,1.19840510951844,1.48614684112296,0,0.202475267389826,0,0.473193248037357,0,0,0.850432901510698,0.297872853602656,0.261199789138935,1.59992422793407,1.83527424853736,4.01962374880514,4.73838195774982,2.58565479223067,3.42042155021473,2.52030129759931,1.77384408524244,0,0,0,0.866554859253824,0.997407872150954,1.02084678131185,0,0,0.523523743973798,0,0.683045484958446,0,0.755380907853464,0.709638518536602,0.367093504323363,0,0,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0.725362142011344,0,1.28629718017973,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,1.04182674111352,0,0,0.15279824777681,0,0,0,0.075726193333184,0.302286240427142,2.02905142091174,0,0,2.15881276655127,0,2.24013443548668,0.702222100658759,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,1.7127581957859,0.258937883647172,0.445326417194474,0.173485326766136,0,0.691846491768175,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,0,0.628340120440365,2.04365644166873,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.373220911830279,0.505445516867349,0.841767423545896,0.260240885925407,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,1.29351685369508,0.431135985865684,0.567318240503458,0,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.590292695242212,0,0.232533944750408,0,0,0.329119699826961,0.820837320395476,0.405344047729279,0.877199924551994,0.658650345873152,1.07365135008297,0.210289948564127,0.205809224758569,9.91256348951394,2.11560453330835,0.853153002140936,1.16118335930219,0.515469845288373,1.81515172161008,1.77902435075896,1.33157938278791,6.16887780007865,0.494096864172033,2.01068167040216,2.38747766449381,0.779856348476481,1.79763881730844,3.45820879799511,3.38540164532424,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0,0.561086559122548,0.442655759869801,0.442830443938806,0.627994911365499,0.493588655687202,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0,0,1.2731292589071,0.575392274901621,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,2.18426371180192,1.01031551178845,0.896987067609561,1.4473305640901,3.51031061316549,1.32643988239339,0.325929952884052,0.339490171550376,0.234690248288502,1.00503754465089,1.42826184531608,3.12213836572478,2.36452716159286,0.8858587585951,1.59454768657487,3.27726629431476,3.45369963731791,3.03763023021174,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0,0.809621403349789,0,0,0,0.567760340833074,0.178065603667255,0.81443479676788,0,1.32745138339963,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0.329098041204242,0,0.704015124191131,0.21183207086382,0.220528398054962,0.8244312647074,0.322928853391811,0.422190474497091,0.716234064018819,0.656563598980245,3.49777003955821,0.18542530201051,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,1.90934123603023,0,1.01659733563424,0.756037385752609,0.418176592028937,0.218362563746178,0.809186078308924,1.32245529160537,1.04702376793612,1.55537967950151,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.51968329191118,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0,0.381034033274999,0.100826185136841,0.194915761479505,0.577271049841977,0.584384510907845,0.226730383615211,0.221985953374065,0.358855426437903,0,0.386379188064381,0.375364950902364,0,0.857473516316263,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.256100609619477,0.287177344778066,0,0.695305955669133,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.953744759789284,0.436039249896986,0.564656282491984,0.423073039458382,0.73171189149109,0.263069711437843,0.407412341537585,0,0.711810108745045,0.0985044823755635,0,0.309873682371932,0.771626443924566,0,0.935726433781634,0.429742108096597,0.765153328275374,0.661774257358546,0 | |||
|short_description=p4@Smurf2 | |||
}} |
Revision as of 08:10, 5 August 2015
Short description: | p4@Smurf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Smurf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 71bp_to_ENSMUST00000103067, NM_025481, uc007lzx.2, uc007lzy.2_5end |
EntrezGene: | 66313 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.20e-09 | 6 |
gut absorptive cell | 1.20e-09 | 6 |
enterocyte | 1.20e-09 | 6 |
epithelial cell | 4.47e-09 | 25 |
columnar/cuboidal epithelial cell | 4.12e-08 | 7 |
intestinal epithelial cell | 1.02e-07 | 9 |
epithelial cell of alimentary canal | 1.02e-07 | 9 |
endodermal cell | 5.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
digestive system | 4.87e-26 | 116 |
digestive tract | 4.87e-26 | 116 |
primitive gut | 4.87e-26 | 116 |
intestine | 2.08e-25 | 31 |
endoderm-derived structure | 2.35e-25 | 118 |
endoderm | 2.35e-25 | 118 |
presumptive endoderm | 2.35e-25 | 118 |
subdivision of digestive tract | 4.15e-24 | 114 |
gastrointestinal system | 3.46e-21 | 47 |
mucosa | 5.03e-15 | 15 |
intestinal mucosa | 7.75e-13 | 13 |
wall of intestine | 7.75e-13 | 13 |
gastrointestinal system mucosa | 7.75e-13 | 13 |
endo-epithelium | 5.60e-11 | 69 |
organ system subdivision | 4.58e-09 | 194 |
lung | 6.82e-09 | 14 |
respiratory tube | 6.82e-09 | 14 |
respiration organ | 6.82e-09 | 14 |
pair of lungs | 6.82e-09 | 14 |
lung primordium | 6.82e-09 | 14 |
lung bud | 6.82e-09 | 14 |
organ component layer | 4.61e-08 | 24 |
epithelium of mucosa | 1.02e-07 | 9 |
gastrointestinal system epithelium | 1.02e-07 | 9 |
intestinal epithelium | 1.02e-07 | 9 |
epithelial bud | 6.51e-07 | 17 |
thoracic cavity element | 6.51e-07 | 17 |
thoracic segment organ | 6.51e-07 | 17 |
thoracic cavity | 6.51e-07 | 17 |
thoracic segment of trunk | 6.51e-07 | 17 |
respiratory primordium | 6.51e-07 | 17 |
endoderm of foregut | 6.51e-07 | 17 |
small intestine | 7.57e-07 | 4 |