FFCP PHASE1:Mm9::chr2:67492047..67492052,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:67492047..67492052,+|id=chr2:67492047..67492052,+|ontology_enrichment_celltype=CL:0000393!2.33e-32!39;CL:0000211!2.33e-32!39;CL:0000540!4.21e-32!33;CL:0000047!4.21e-32!33;CL:0000031!4.21e-32!33;CL:0000404!4.21e-32!33;CL:0000055!1.68e-24!50;CL:0002319!4.81e-24!43;CL:0000221!2.75e-23!44;CL:0000133!2.75e-23!44;CL:0000117!3.08e-18!23;CL:0000337!3.08e-18!23;CL:0002321!7.54e-16!70;CL:0000220!7.54e-16!70;CL:0000107!3.73e-14!9;CL:0000723!3.43e-10!91;CL:0000048!3.43e-10!91;CL:0000034!5.47e-09!97|ontology_enrichment_celltype_v019_2=CL:0000107,1.87e-43,9;CL:0000393,4.06e-24,39;CL:0000211,4.06e-24,39;CL:0000540,1.09e-23,33;CL:0000047,1.09e-23,33;CL:0000031,1.09e-23,33;CL:0000404,1.09e-23,33;CL:0002319,4.79e-18,43;CL:0000221,1.27e-17,44;CL:0000133,1.27e-17,44;CL:0002321,3.75e-13,70;CL:0002612,1.75e-11,3;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000034,2.81e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.03e-20!75;UBERON:0001016!1.03e-20!75;UBERON:0001017!2.01e-20!73;UBERON:0005743!2.01e-20!73;UBERON:0004121!1.03e-17!102;UBERON:0000924!1.03e-17!102;UBERON:0006601!1.03e-17!102;UBERON:0002410!3.73e-14!9;UBERON:0000010!3.54e-13!11;UBERON:0002346!4.24e-12!71;UBERON:0003075!4.24e-12!71;UBERON:0007284!4.24e-12!71;UBERON:0002020!3.83e-11!34;UBERON:0001049!1.19e-09!52;UBERON:0005068!1.19e-09!52;UBERON:0006241!1.19e-09!52;UBERON:0007135!1.19e-09!52;UBERON:0002791!8.00e-08!29;UBERON:0003528!8.00e-08!29;UBERON:0001893!8.00e-08!29;UBERON:0002616!1.63e-07!49;UBERON:0000033!2.44e-07!63;UBERON:0000955!2.95e-07!50;UBERON:0006238!2.95e-07!50;UBERON:0003056!4.09e-07!49;UBERON:0003080!4.33e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.87e-43,9;UBERON:0000010,1.55e-35,11;UBERON:0010313,4.47e-25,3;UBERON:0002342,4.47e-25,3;UBERON:0002005,4.47e-25,3;UBERON:0005428,4.47e-25,3;UBERON:0005062,4.47e-25,3;UBERON:0000013,5.39e-25,3;UBERON:0002257,1.75e-11,3;UBERON:0001017,2.39e-10,73;UBERON:0001016,4.73e-10,75;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95;UBERON:0001948,3.01e-07,5;UBERON:0002315,3.01e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,1.03134418455488,0.606949382578793,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0.518448061542388,0.540023753326763,0.630974884054146,0.571301968807607,0,0.489963196859816,0,0.919218786610021,0,0.893811366596314,0.921639199537461,0.791317726381163,0.274462930807229,0.52091337055676,0.837548997004143,3.37657566019008,0,1.47314292736834,2.56269025438385,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,4.10160685241134,4.29482618726302,2.36965737506079,1.19484398976276,0.445597348164788,0.283076530788832,3.64329631507405,6.42962887404886,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr2:67492047..67492052,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:67492047..67492052,+ | |||
|description=CAGE_peak_at_chr2:67492047..67492052,+ | |||
|id=chr2:67492047..67492052,+ | |||
|ontology_enrichment_celltype=CL:0000393!2.33e-32!39;CL:0000211!2.33e-32!39;CL:0000540!4.21e-32!33;CL:0000047!4.21e-32!33;CL:0000031!4.21e-32!33;CL:0000404!4.21e-32!33;CL:0000055!1.68e-24!50;CL:0002319!4.81e-24!43;CL:0000221!2.75e-23!44;CL:0000133!2.75e-23!44;CL:0000117!3.08e-18!23;CL:0000337!3.08e-18!23;CL:0002321!7.54e-16!70;CL:0000220!7.54e-16!70;CL:0000107!3.73e-14!9;CL:0000723!3.43e-10!91;CL:0000048!3.43e-10!91;CL:0000034!5.47e-09!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.87e-43,9;CL:0000393,4.06e-24,39;CL:0000211,4.06e-24,39;CL:0000540,1.09e-23,33;CL:0000047,1.09e-23,33;CL:0000031,1.09e-23,33;CL:0000404,1.09e-23,33;CL:0002319,4.79e-18,43;CL:0000221,1.27e-17,44;CL:0000133,1.27e-17,44;CL:0002321,3.75e-13,70;CL:0002612,1.75e-11,3;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000034,2.81e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-20!75;UBERON:0001016!1.03e-20!75;UBERON:0001017!2.01e-20!73;UBERON:0005743!2.01e-20!73;UBERON:0004121!1.03e-17!102;UBERON:0000924!1.03e-17!102;UBERON:0006601!1.03e-17!102;UBERON:0002410!3.73e-14!9;UBERON:0000010!3.54e-13!11;UBERON:0002346!4.24e-12!71;UBERON:0003075!4.24e-12!71;UBERON:0007284!4.24e-12!71;UBERON:0002020!3.83e-11!34;UBERON:0001049!1.19e-09!52;UBERON:0005068!1.19e-09!52;UBERON:0006241!1.19e-09!52;UBERON:0007135!1.19e-09!52;UBERON:0002791!8.00e-08!29;UBERON:0003528!8.00e-08!29;UBERON:0001893!8.00e-08!29;UBERON:0002616!1.63e-07!49;UBERON:0000033!2.44e-07!63;UBERON:0000955!2.95e-07!50;UBERON:0006238!2.95e-07!50;UBERON:0003056!4.09e-07!49;UBERON:0003080!4.33e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.87e-43,9;UBERON:0000010,1.55e-35,11;UBERON:0010313,4.47e-25,3;UBERON:0002342,4.47e-25,3;UBERON:0002005,4.47e-25,3;UBERON:0005428,4.47e-25,3;UBERON:0005062,4.47e-25,3;UBERON:0000013,5.39e-25,3;UBERON:0002257,1.75e-11,3;UBERON:0001017,2.39e-10,73;UBERON:0001016,4.73e-10,75;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95;UBERON:0001948,3.01e-07,5;UBERON:0002315,3.01e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,1.03134418455488,0.606949382578793,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0.518448061542388,0.540023753326763,0.630974884054146,0.571301968807607,0,0.489963196859816,0,0.919218786610021,0,0.893811366596314,0.921639199537461,0.791317726381163,0.274462930807229,0.52091337055676,0.837548997004143,3.37657566019008,0,1.47314292736834,2.56269025438385,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,4.10160685241134,4.29482618726302,2.36965737506079,1.19484398976276,0.445597348164788,0.283076530788832,3.64329631507405,6.42962887404886,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr2:67492047..67492052,+ | |||
}} |
Latest revision as of 08:44, 5 August 2015
Short description: | p@chr2:67492047..67492052, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:67492047..67492052, + |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.87e-43 | 9 |
electrically responsive cell | 4.06e-24 | 39 |
electrically active cell | 4.06e-24 | 39 |
neuron | 1.09e-23 | 33 |
neuronal stem cell | 1.09e-23 | 33 |
neuroblast | 1.09e-23 | 33 |
electrically signaling cell | 1.09e-23 | 33 |
neural cell | 4.79e-18 | 43 |
ectodermal cell | 1.27e-17 | 44 |
neurectodermal cell | 1.27e-17 | 44 |
embryonic cell | 3.75e-13 | 70 |
neuron of the ventral spinal cord | 1.75e-11 | 3 |
somatic stem cell | 6.08e-10 | 91 |
multi fate stem cell | 6.08e-10 | 91 |
stem cell | 2.81e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.87e-43 | 9 |
peripheral nervous system | 1.55e-35 | 11 |
neural crest-derived structure | 4.47e-25 | 3 |
neural crest | 4.47e-25 | 3 |
enteric nervous system | 4.47e-25 | 3 |
vagal neural crest | 4.47e-25 | 3 |
neural fold | 4.47e-25 | 3 |
sympathetic nervous system | 5.39e-25 | 3 |
ventral horn of spinal cord | 1.75e-11 | 3 |
central nervous system | 2.39e-10 | 73 |
nervous system | 4.73e-10 | 75 |
ectoderm-derived structure | 9.14e-08 | 95 |
ectoderm | 9.14e-08 | 95 |
presumptive ectoderm | 9.14e-08 | 95 |
regional part of spinal cord | 3.01e-07 | 5 |
gray matter of spinal cord | 3.01e-07 | 5 |