FFCP PHASE1:Mm9::chr4:22415290..22415307,-: Difference between revisions
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{{FFCP|EntrezGene=18992|HGNC=|MCL_coexpression_id=950|UniProt=P31360|association_with_transcript=-12bp_to_uc008sdq.1_5end|description=CAGE_peak_2_at_Pou3f2_5end|id=chr4:22415290..22415307,-|ontology_enrichment_celltype=CL:0000221!6.28e-26!44;CL:0000133!6.28e-26!44;CL:0002319!6.25e-25!43;CL:0000540!8.57e-24!33;CL:0000047!8.57e-24!33;CL:0000031!8.57e-24!33;CL:0000404!8.57e-24!33;CL:0000055!3.99e-19!50;CL:0000117!7.33e-19!23;CL:0000337!7.33e-19!23;CL:0000393!5.57e-18!39;CL:0000211!5.57e-18!39;CL:0002321!2.18e-10!70;CL:0000220!2.18e-10!70;CL:0002609!8.12e-07!6|ontology_enrichment_celltype_v019_2=CL:0000540,2.22e-26,33;CL:0000047,2.22e-26,33;CL:0000031,2.22e-26,33;CL:0000404,2.22e-26,33;CL:0000221,9.00e-25,44;CL:0000133,9.00e-25,44;CL:0000117,3.35e-24,23;CL:0000337,3.35e-24,23;CL:0002319,1.41e-23,43;CL:0000393,1.08e-20,39;CL:0000211,1.08e-20,39;CL:0002321,2.49e-11,70;CL:0002609,1.92e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.11e-44!73;UBERON:0005743!9.11e-44!73;UBERON:0000073!4.24e-43!75;UBERON:0001016!4.24e-43!75;UBERON:0004121!2.28e-36!102;UBERON:0000924!2.28e-36!102;UBERON:0006601!2.28e-36!102;UBERON:0001049!1.70e-29!52;UBERON:0005068!1.70e-29!52;UBERON:0006241!1.70e-29!52;UBERON:0007135!1.70e-29!52;UBERON:0000033!2.39e-29!63;UBERON:0002346!8.11e-29!71;UBERON:0003075!8.11e-29!71;UBERON:0007284!8.11e-29!71;UBERON:0000955!1.57e-27!50;UBERON:0006238!1.57e-27!50;UBERON:0002616!1.06e-26!49;UBERON:0002020!1.78e-25!34;UBERON:0003056!5.34e-23!49;UBERON:0003080!1.41e-22!40;UBERON:0002791!8.74e-22!29;UBERON:0003528!8.74e-22!29;UBERON:0001893!8.74e-22!29;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0007811!1.81e-16!86;UBERON:0000956!6.80e-16!21;UBERON:0001869!6.80e-16!21;UBERON:0000203!6.80e-16!21;UBERON:0000153!1.69e-14!94;UBERON:0002619!3.57e-12!17;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0003076!2.55e-07!12;UBERON:0003057!2.55e-07!12;UBERON:0002420!4.93e-07!8;UBERON:0007245!4.93e-07!8;UBERON:0010009!4.93e-07!8;UBERON:0010011!4.93e-07!8;UBERON:0000454!4.93e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-41,73;UBERON:0001016,4.91e-40,75;UBERON:0004121,3.57e-35,95;UBERON:0000924,3.57e-35,95;UBERON:0006601,3.57e-35,95;UBERON:0002346,1.31e-31,64;UBERON:0003075,1.31e-31,64;UBERON:0007284,1.31e-31,64;UBERON:0000073,2.06e-30,54;UBERON:0002020,9.19e-30,34;UBERON:0010371,4.43e-29,73;UBERON:0001049,5.05e-29,52;UBERON:0005068,5.05e-29,52;UBERON:0006241,5.05e-29,52;UBERON:0007135,5.05e-29,52;UBERON:0003528,5.68e-25,29;UBERON:0002791,5.68e-25,29;UBERON:0001893,5.68e-25,29;UBERON:0000955,2.46e-24,47;UBERON:0006238,2.46e-24,47;UBERON:0002616,2.37e-23,46;UBERON:0003080,3.25e-20,40;UBERON:0003056,4.56e-20,49;UBERON:0010314,1.05e-19,92;UBERON:0002780,3.67e-19,39;UBERON:0001890,3.67e-19,39;UBERON:0006240,3.67e-19,39;UBERON:0000956,2.38e-17,21;UBERON:0001869,2.38e-17,21;UBERON:0000203,2.38e-17,21;UBERON:0002619,1.18e-12,17;UBERON:0002021,2.07e-10,10;UBERON:0000411,2.07e-10,10;UBERON:0001950,2.07e-10,10;UBERON:0003076,2.70e-09,12;UBERON:0003057,2.70e-09,12;UBERON:0002420,1.00e-08,8;UBERON:0007245,1.00e-08,8;UBERON:0010009,1.00e-08,8;UBERON:0010011,1.00e-08,8;UBERON:0000454,1.00e-08,8;UBERON:0002240,8.06e-07,6;UBERON:0005174,8.06e-07,6;UBERON:0001137,8.06e-07,6|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.58328969722285,2.09979632438044,1.43752564364972,0,0,0,0,0,0,11.7343547298567,10.0508286061686,5.07065122804943,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,16.5903379693564,16.2007125998029,18.718921560273,2.85650984403804,3.09215957332259,8.94182834269164,6.51749202924007,2.75765635983006,2.20231761998777,2.55374676170375,1.84327839907492,7.78129097608144,4.20843160571084,7.29278718779464,2.79182999001381,1.68828783009504,3.20876320331301,2.94628585473668,2.42031857358475,2.79599168737951,0,0.529000920747499,0,0,0,0,0,0,0,0,0,0,11.9716906810178,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,5.99162557619291,1.37250180845588,8.16753288733619,5.38855392596057,2.30143911597297,4.1557608911912,1.94689515681309,0,0,0,0,0,0.229902104433473,0.180062129805349,1.35634336052144,3.60593445502038,3.97152532883034,2.90475346135159,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,2.36680608472354,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,2.24770825982909,2.22702204525186,0,0,2.2085575359138,2.34263246577983,5.60100834105277,0.716906393857656,0.445597348164788,0.566153061577665,2.42886421004937,1.75353514746787,1.97643888973262,3.21321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.428674070063185,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,8.02053718815155,7.38968684077857,5.48066015816514,2.2661816921691,2.70009000092722,2.2516060161211,2.26571204492102,2.5888015587591,5.50072942196136,2.79317411380722,1.87806966329548,0.486213434136588,3.14419743941973,1.47074806760011,1.77797382241292,1.23621034343337,0.64183841918363,0.505394423527595,1.52087579934144,1.13175804831646,1.21733959710847,0.832326981263301,0.746661096422973,0.952587382566147,0.927074607558844,0.38581844092741,0.824171801606613,1.03039244094078,0,1.59728225543404,1.43061713968393,0.581385666529314,1.12931256498397,1.18460451048347,1.46342378298218,0.263069711437843,1.08643291076689,2.24456908663095,1.18635018124174,1.37906275325789,1.63692417267876,1.70430525304563,0.578719832943424,2.24829520144151,0.467863216890817,1.07435527024149,0.382576664137687,0.441182838239031,0|short_description=p2@Pou3f2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18992 | |||
|HGNC= | |||
|MCL_coexpression_id=950 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P31360 | |||
|association_with_transcript=-12bp_to_uc008sdq.1_5end | |||
|cluster_id=chr4:22415290..22415307,- | |||
|description=CAGE_peak_2_at_Pou3f2_5end | |||
|id=chr4:22415290..22415307,- | |||
|ontology_enrichment_celltype=CL:0000221!6.28e-26!44;CL:0000133!6.28e-26!44;CL:0002319!6.25e-25!43;CL:0000540!8.57e-24!33;CL:0000047!8.57e-24!33;CL:0000031!8.57e-24!33;CL:0000404!8.57e-24!33;CL:0000055!3.99e-19!50;CL:0000117!7.33e-19!23;CL:0000337!7.33e-19!23;CL:0000393!5.57e-18!39;CL:0000211!5.57e-18!39;CL:0002321!2.18e-10!70;CL:0000220!2.18e-10!70;CL:0002609!8.12e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.22e-26,33;CL:0000047,2.22e-26,33;CL:0000031,2.22e-26,33;CL:0000404,2.22e-26,33;CL:0000221,9.00e-25,44;CL:0000133,9.00e-25,44;CL:0000117,3.35e-24,23;CL:0000337,3.35e-24,23;CL:0002319,1.41e-23,43;CL:0000393,1.08e-20,39;CL:0000211,1.08e-20,39;CL:0002321,2.49e-11,70;CL:0002609,1.92e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.11e-44!73;UBERON:0005743!9.11e-44!73;UBERON:0000073!4.24e-43!75;UBERON:0001016!4.24e-43!75;UBERON:0004121!2.28e-36!102;UBERON:0000924!2.28e-36!102;UBERON:0006601!2.28e-36!102;UBERON:0001049!1.70e-29!52;UBERON:0005068!1.70e-29!52;UBERON:0006241!1.70e-29!52;UBERON:0007135!1.70e-29!52;UBERON:0000033!2.39e-29!63;UBERON:0002346!8.11e-29!71;UBERON:0003075!8.11e-29!71;UBERON:0007284!8.11e-29!71;UBERON:0000955!1.57e-27!50;UBERON:0006238!1.57e-27!50;UBERON:0002616!1.06e-26!49;UBERON:0002020!1.78e-25!34;UBERON:0003056!5.34e-23!49;UBERON:0003080!1.41e-22!40;UBERON:0002791!8.74e-22!29;UBERON:0003528!8.74e-22!29;UBERON:0001893!8.74e-22!29;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0007811!1.81e-16!86;UBERON:0000956!6.80e-16!21;UBERON:0001869!6.80e-16!21;UBERON:0000203!6.80e-16!21;UBERON:0000153!1.69e-14!94;UBERON:0002619!3.57e-12!17;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0003076!2.55e-07!12;UBERON:0003057!2.55e-07!12;UBERON:0002420!4.93e-07!8;UBERON:0007245!4.93e-07!8;UBERON:0010009!4.93e-07!8;UBERON:0010011!4.93e-07!8;UBERON:0000454!4.93e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-41,73;UBERON:0001016,4.91e-40,75;UBERON:0004121,3.57e-35,95;UBERON:0000924,3.57e-35,95;UBERON:0006601,3.57e-35,95;UBERON:0002346,1.31e-31,64;UBERON:0003075,1.31e-31,64;UBERON:0007284,1.31e-31,64;UBERON:0000073,2.06e-30,54;UBERON:0002020,9.19e-30,34;UBERON:0010371,4.43e-29,73;UBERON:0001049,5.05e-29,52;UBERON:0005068,5.05e-29,52;UBERON:0006241,5.05e-29,52;UBERON:0007135,5.05e-29,52;UBERON:0003528,5.68e-25,29;UBERON:0002791,5.68e-25,29;UBERON:0001893,5.68e-25,29;UBERON:0000955,2.46e-24,47;UBERON:0006238,2.46e-24,47;UBERON:0002616,2.37e-23,46;UBERON:0003080,3.25e-20,40;UBERON:0003056,4.56e-20,49;UBERON:0010314,1.05e-19,92;UBERON:0002780,3.67e-19,39;UBERON:0001890,3.67e-19,39;UBERON:0006240,3.67e-19,39;UBERON:0000956,2.38e-17,21;UBERON:0001869,2.38e-17,21;UBERON:0000203,2.38e-17,21;UBERON:0002619,1.18e-12,17;UBERON:0002021,2.07e-10,10;UBERON:0000411,2.07e-10,10;UBERON:0001950,2.07e-10,10;UBERON:0003076,2.70e-09,12;UBERON:0003057,2.70e-09,12;UBERON:0002420,1.00e-08,8;UBERON:0007245,1.00e-08,8;UBERON:0010009,1.00e-08,8;UBERON:0010011,1.00e-08,8;UBERON:0000454,1.00e-08,8;UBERON:0002240,8.06e-07,6;UBERON:0005174,8.06e-07,6;UBERON:0001137,8.06e-07,6 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.58328969722285,2.09979632438044,1.43752564364972,0,0,0,0,0,0,11.7343547298567,10.0508286061686,5.07065122804943,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,16.5903379693564,16.2007125998029,18.718921560273,2.85650984403804,3.09215957332259,8.94182834269164,6.51749202924007,2.75765635983006,2.20231761998777,2.55374676170375,1.84327839907492,7.78129097608144,4.20843160571084,7.29278718779464,2.79182999001381,1.68828783009504,3.20876320331301,2.94628585473668,2.42031857358475,2.79599168737951,0,0.529000920747499,0,0,0,0,0,0,0,0,0,0,11.9716906810178,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,5.99162557619291,1.37250180845588,8.16753288733619,5.38855392596057,2.30143911597297,4.1557608911912,1.94689515681309,0,0,0,0,0,0.229902104433473,0.180062129805349,1.35634336052144,3.60593445502038,3.97152532883034,2.90475346135159,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,2.36680608472354,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,2.24770825982909,2.22702204525186,0,0,2.2085575359138,2.34263246577983,5.60100834105277,0.716906393857656,0.445597348164788,0.566153061577665,2.42886421004937,1.75353514746787,1.97643888973262,3.21321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.428674070063185,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,8.02053718815155,7.38968684077857,5.48066015816514,2.2661816921691,2.70009000092722,2.2516060161211,2.26571204492102,2.5888015587591,5.50072942196136,2.79317411380722,1.87806966329548,0.486213434136588,3.14419743941973,1.47074806760011,1.77797382241292,1.23621034343337,0.64183841918363,0.505394423527595,1.52087579934144,1.13175804831646,1.21733959710847,0.832326981263301,0.746661096422973,0.952587382566147,0.927074607558844,0.38581844092741,0.824171801606613,1.03039244094078,0,1.59728225543404,1.43061713968393,0.581385666529314,1.12931256498397,1.18460451048347,1.46342378298218,0.263069711437843,1.08643291076689,2.24456908663095,1.18635018124174,1.37906275325789,1.63692417267876,1.70430525304563,0.578719832943424,2.24829520144151,0.467863216890817,1.07435527024149,0.382576664137687,0.441182838239031,0 | |||
|short_description=p2@Pou3f2 | |||
}} |
Revision as of 08:46, 5 August 2015
Short description: | p2@Pou3f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pou3f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:950 |
Association with transcript: | -12bp_to_uc008sdq.1_5end |
EntrezGene: | 18992 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.22e-26 | 33 |
neuronal stem cell | 2.22e-26 | 33 |
neuroblast | 2.22e-26 | 33 |
electrically signaling cell | 2.22e-26 | 33 |
ectodermal cell | 9.00e-25 | 44 |
neurectodermal cell | 9.00e-25 | 44 |
CNS neuron (sensu Vertebrata) | 3.35e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-24 | 23 |
neural cell | 1.41e-23 | 43 |
electrically responsive cell | 1.08e-20 | 39 |
electrically active cell | 1.08e-20 | 39 |
embryonic cell | 2.49e-11 | 70 |
neuron of cerebral cortex | 1.92e-08 | 6 |