FFCP PHASE1:Mm9::chr4:33159911..33159924,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:33159911..33159924,-|id=chr4:33159911..33159924,-|ontology_enrichment_celltype=CL:0000838!2.33e-15!12;CL:0000988!1.89e-14!32;CL:0002032!1.89e-14!32;CL:0000037!1.89e-14!32;CL:0000566!1.89e-14!32;CL:0000837!1.89e-14!32;CL:0000542!5.31e-14!13;CL:0000051!5.31e-14!13;CL:0000084!9.26e-14!11;CL:0000827!9.26e-14!11;CL:0000791!1.01e-13!9;CL:0000789!1.01e-13!9;CL:0002420!1.01e-13!9;CL:0002419!1.01e-13!9;CL:0000790!1.01e-13!9;CL:0000738!2.18e-12!17;CL:0002087!2.18e-12!17;CL:0000624!9.37e-12!8;CL:0002031!7.13e-11!25;CL:0002320!9.64e-09!46;CL:0000134!9.64e-09!46;CL:0000893!6.43e-08!6;CL:0002489!6.43e-08!6;CL:0000898!6.43e-08!6;CL:0000809!6.43e-08!6;CL:0000810!6.43e-08!6;CL:0000895!6.43e-08!6;CL:0000808!6.43e-08!6;CL:0000894!6.43e-08!6;CL:0000806!6.43e-08!6;CL:0000807!6.43e-08!6;CL:0000805!6.43e-08!6;CL:0002425!6.43e-08!6;CL:0002436!6.43e-08!6;CL:0002427!6.43e-08!6;CL:0002428!6.43e-08!6;CL:0002429!6.43e-08!6;CL:0002433!6.43e-08!6;CL:0002431!6.43e-08!6;CL:0002432!6.43e-08!6;CL:0000219!8.96e-08!54|ontology_enrichment_celltype_v019_2=CL:0000791,1.83e-20,9;CL:0000789,1.83e-20,9;CL:0002420,1.83e-20,9;CL:0002419,1.83e-20,9;CL:0000790,1.83e-20,9;CL:0000084,9.16e-17,11;CL:0000827,9.16e-17,11;CL:0000838,2.25e-15,12;CL:0000624,6.48e-15,8;CL:0000542,3.38e-14,13;CL:0000051,3.38e-14,13;CL:0000738,7.26e-11,17;CL:0002087,7.26e-11,17;CL:0000625,6.23e-09,1;CL:0000815,1.05e-08,1;CL:0000792,1.05e-08,1;CL:0000988,4.95e-08,32;CL:0002032,4.95e-08,32;CL:0000037,4.95e-08,32;CL:0000837,4.95e-08,32;CL:0002031,2.22e-07,25|ontology_enrichment_disease=DOID:0060100!2.57e-07!3;DOID:4045!2.57e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.12e-11,3;DOID:4045,8.12e-11,3|ontology_enrichment_uberon=UBERON:0002370!3.68e-17!23;UBERON:0000974!3.68e-17!23;UBERON:0004807!3.68e-17!23;UBERON:0005058!3.68e-17!23;UBERON:0003351!3.68e-17!23;UBERON:0009113!3.68e-17!23;UBERON:0003295!3.68e-17!23;UBERON:0009722!3.68e-17!23;UBERON:0005562!3.68e-17!23;UBERON:0007690!3.68e-17!23;UBERON:0006562!2.79e-16!24;UBERON:0003408!2.79e-16!24;UBERON:0001557!2.79e-16!24;UBERON:0001042!2.79e-16!24;UBERON:0008814!2.79e-16!24;UBERON:0009145!2.79e-16!24;UBERON:0000072!4.93e-14!27;UBERON:0004177!8.49e-13!29;UBERON:0002193!2.76e-12!48;UBERON:0002390!5.70e-12!45;UBERON:0003061!5.70e-12!45;UBERON:0000065!1.43e-11!41;UBERON:0000063!2.39e-11!35;UBERON:0001004!3.46e-11!42;UBERON:0002384!9.64e-09!46;UBERON:0002405!7.35e-07!70|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,0.140788722151667,0.468129052643987,0.34243593645101,0,1.02720437958723,1.39872643870396,0,0,0,0.630924330716475,0.411343300817216,0,0,0.496454756004426,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,2.09409497589519,2.94115744015507,1.36609096991689,3.39857247121808,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,5.80289713609076,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,0.508280908292259,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,2.23922323717853,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.302899349844443,0.457240839929999,0,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:33159911..33159924,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:33159911..33159924,- | |||
|description=CAGE_peak_at_chr4:33159911..33159924,- | |||
|id=chr4:33159911..33159924,- | |||
|ontology_enrichment_celltype=CL:0000838!2.33e-15!12;CL:0000988!1.89e-14!32;CL:0002032!1.89e-14!32;CL:0000037!1.89e-14!32;CL:0000566!1.89e-14!32;CL:0000837!1.89e-14!32;CL:0000542!5.31e-14!13;CL:0000051!5.31e-14!13;CL:0000084!9.26e-14!11;CL:0000827!9.26e-14!11;CL:0000791!1.01e-13!9;CL:0000789!1.01e-13!9;CL:0002420!1.01e-13!9;CL:0002419!1.01e-13!9;CL:0000790!1.01e-13!9;CL:0000738!2.18e-12!17;CL:0002087!2.18e-12!17;CL:0000624!9.37e-12!8;CL:0002031!7.13e-11!25;CL:0002320!9.64e-09!46;CL:0000134!9.64e-09!46;CL:0000893!6.43e-08!6;CL:0002489!6.43e-08!6;CL:0000898!6.43e-08!6;CL:0000809!6.43e-08!6;CL:0000810!6.43e-08!6;CL:0000895!6.43e-08!6;CL:0000808!6.43e-08!6;CL:0000894!6.43e-08!6;CL:0000806!6.43e-08!6;CL:0000807!6.43e-08!6;CL:0000805!6.43e-08!6;CL:0002425!6.43e-08!6;CL:0002436!6.43e-08!6;CL:0002427!6.43e-08!6;CL:0002428!6.43e-08!6;CL:0002429!6.43e-08!6;CL:0002433!6.43e-08!6;CL:0002431!6.43e-08!6;CL:0002432!6.43e-08!6;CL:0000219!8.96e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.83e-20,9;CL:0000789,1.83e-20,9;CL:0002420,1.83e-20,9;CL:0002419,1.83e-20,9;CL:0000790,1.83e-20,9;CL:0000084,9.16e-17,11;CL:0000827,9.16e-17,11;CL:0000838,2.25e-15,12;CL:0000624,6.48e-15,8;CL:0000542,3.38e-14,13;CL:0000051,3.38e-14,13;CL:0000738,7.26e-11,17;CL:0002087,7.26e-11,17;CL:0000625,6.23e-09,1;CL:0000815,1.05e-08,1;CL:0000792,1.05e-08,1;CL:0000988,4.95e-08,32;CL:0002032,4.95e-08,32;CL:0000037,4.95e-08,32;CL:0000837,4.95e-08,32;CL:0002031,2.22e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!2.57e-07!3;DOID:4045!2.57e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.12e-11,3;DOID:4045,8.12e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.68e-17!23;UBERON:0000974!3.68e-17!23;UBERON:0004807!3.68e-17!23;UBERON:0005058!3.68e-17!23;UBERON:0003351!3.68e-17!23;UBERON:0009113!3.68e-17!23;UBERON:0003295!3.68e-17!23;UBERON:0009722!3.68e-17!23;UBERON:0005562!3.68e-17!23;UBERON:0007690!3.68e-17!23;UBERON:0006562!2.79e-16!24;UBERON:0003408!2.79e-16!24;UBERON:0001557!2.79e-16!24;UBERON:0001042!2.79e-16!24;UBERON:0008814!2.79e-16!24;UBERON:0009145!2.79e-16!24;UBERON:0000072!4.93e-14!27;UBERON:0004177!8.49e-13!29;UBERON:0002193!2.76e-12!48;UBERON:0002390!5.70e-12!45;UBERON:0003061!5.70e-12!45;UBERON:0000065!1.43e-11!41;UBERON:0000063!2.39e-11!35;UBERON:0001004!3.46e-11!42;UBERON:0002384!9.64e-09!46;UBERON:0002405!7.35e-07!70 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,0.140788722151667,0.468129052643987,0.34243593645101,0,1.02720437958723,1.39872643870396,0,0,0,0.630924330716475,0.411343300817216,0,0,0.496454756004426,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,2.09409497589519,2.94115744015507,1.36609096991689,3.39857247121808,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,5.80289713609076,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,0.508280908292259,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,2.23922323717853,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.302899349844443,0.457240839929999,0,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:33159911..33159924,- | |||
}} |
Latest revision as of 09:39, 5 August 2015
Short description: | p@chr4:33159911..33159924, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:33159911..33159924, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.83e-20 | 9 |
alpha-beta T cell | 1.83e-20 | 9 |
immature T cell | 1.83e-20 | 9 |
mature T cell | 1.83e-20 | 9 |
immature alpha-beta T cell | 1.83e-20 | 9 |
T cell | 9.16e-17 | 11 |
pro-T cell | 9.16e-17 | 11 |
lymphoid lineage restricted progenitor cell | 2.25e-15 | 12 |
CD4-positive, alpha-beta T cell | 6.48e-15 | 8 |
lymphocyte | 3.38e-14 | 13 |
common lymphoid progenitor | 3.38e-14 | 13 |
leukocyte | 7.26e-11 | 17 |
nongranular leukocyte | 7.26e-11 | 17 |
CD8-positive, alpha-beta T cell | 6.23e-09 | 1 |
regulatory T cell | 1.05e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.05e-08 | 1 |
hematopoietic cell | 4.95e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.95e-08 | 32 |
hematopoietic stem cell | 4.95e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.95e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 2.22e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.12e-11 | 3 |
muscle cancer | 8.12e-11 | 3 |