FFCP PHASE1:Mm9::chr17:88049831..88049870,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=358|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88049831..88049870,+|id=chr17:88049831..88049870,+|ontology_enrichment_celltype=CL:0000066!1.06e-11!25;CL:0002563!4.09e-09!9;CL:0002251!4.09e-09!9;CL:0002076!9.59e-09!15;CL:0000223!8.43e-08!20;CL:0000075!3.35e-07!7|ontology_enrichment_celltype_v019_2=CL:0002076,4.46e-21,15;CL:0000066,7.74e-20,25;CL:0002563,8.47e-19,9;CL:0002251,8.47e-19,9;CL:0000223,2.78e-15,20;CL:0000239,2.06e-11,6;CL:0000677,2.06e-11,6;CL:0000584,2.06e-11,6;CL:0000075,9.49e-10,7;CL:0000068,9.94e-10,3;CL:0002202,9.94e-10,3;CL:0000069,9.94e-10,3;CL:0002632,9.94e-10,3;CL:0002368,9.94e-10,3;CL:0000307,9.94e-10,3;CL:0000377,9.94e-10,3;CL:0000682,1.30e-09,3;CL:0002250,3.75e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.58e-22!43;UBERON:0005409!1.16e-18!59;UBERON:0000344!2.73e-15!15;UBERON:0001242!3.91e-13!13;UBERON:0000060!3.91e-13!13;UBERON:0001262!3.91e-13!13;UBERON:0004786!3.91e-13!13;UBERON:0004119!2.21e-11!130;UBERON:0000925!2.21e-11!130;UBERON:0006595!2.21e-11!130;UBERON:0001007!3.36e-11!128;UBERON:0001555!3.36e-11!128;UBERON:0007026!3.36e-11!128;UBERON:0000485!1.36e-10!11;UBERON:0004921!5.68e-10!126;UBERON:0004185!5.68e-10!126;UBERON:0004923!1.30e-09!24;UBERON:0003350!4.09e-09!9;UBERON:0004808!4.09e-09!9;UBERON:0001277!4.09e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.30e-37,31;UBERON:0000344,4.95e-36,15;UBERON:0001242,5.48e-30,13;UBERON:0001262,5.48e-30,13;UBERON:0004786,5.48e-30,13;UBERON:0005409,1.59e-25,47;UBERON:0004923,2.08e-21,24;UBERON:0003350,8.47e-19,9;UBERON:0004808,8.47e-19,9;UBERON:0001277,8.47e-19,9;UBERON:0000485,3.64e-15,11;UBERON:0001007,1.06e-14,116;UBERON:0001555,1.06e-14,116;UBERON:0007026,1.06e-14,116;UBERON:0004119,2.32e-14,118;UBERON:0000925,2.32e-14,118;UBERON:0006595,2.32e-14,118;UBERON:0002108,3.96e-13,4;UBERON:0004921,3.16e-12,114;UBERON:0000331,1.33e-10,3;UBERON:0002116,1.33e-10,3;UBERON:0001204,1.33e-10,3;UBERON:0001168,1.33e-10,3;UBERON:0003126,9.94e-10,3;UBERON:0001005,9.94e-10,3;UBERON:0007196,9.94e-10,3;UBERON:0001558,9.94e-10,3;UBERON:0001962,1.31e-07,2;UBERON:0001961,1.31e-07,2;UBERON:0001744,1.31e-07,2|phase1_expression=0.640595388419176,0.348975407639361,1.36499771816861,2.11724947914781,2.00358291978539,1.84667199103079,2.33612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.17008658030214,0,0,8.63959083084396,10.782236210157,1.72269589234506,3.4460959692726,3.878482188346,19.5724122040065,9.07308467135751,5.98672378769323,0,0,0,2.02196133825892,1.66234645358492,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,3.030874574157,2.53359865475099,3.53867111510348,0.68510327831436,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,0.80673409849337,0.444756087689741,0.760902504450237,4.2707615539006,2.30578536613615,2.76468729680296,1.39269530428806,1.9496408711912,0.898819408654221,3.6743468478698,3.18626037206988,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.971122544619926,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0,2.85152941241944,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr17:88049831..88049870,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:88049831..88049870,+ | |||
|description=CAGE_peak_at_chr17:88049831..88049870,+ | |||
|id=chr17:88049831..88049870,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-11!25;CL:0002563!4.09e-09!9;CL:0002251!4.09e-09!9;CL:0002076!9.59e-09!15;CL:0000223!8.43e-08!20;CL:0000075!3.35e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.46e-21,15;CL:0000066,7.74e-20,25;CL:0002563,8.47e-19,9;CL:0002251,8.47e-19,9;CL:0000223,2.78e-15,20;CL:0000239,2.06e-11,6;CL:0000677,2.06e-11,6;CL:0000584,2.06e-11,6;CL:0000075,9.49e-10,7;CL:0000068,9.94e-10,3;CL:0002202,9.94e-10,3;CL:0000069,9.94e-10,3;CL:0002632,9.94e-10,3;CL:0002368,9.94e-10,3;CL:0000307,9.94e-10,3;CL:0000377,9.94e-10,3;CL:0000682,1.30e-09,3;CL:0002250,3.75e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.58e-22!43;UBERON:0005409!1.16e-18!59;UBERON:0000344!2.73e-15!15;UBERON:0001242!3.91e-13!13;UBERON:0000060!3.91e-13!13;UBERON:0001262!3.91e-13!13;UBERON:0004786!3.91e-13!13;UBERON:0004119!2.21e-11!130;UBERON:0000925!2.21e-11!130;UBERON:0006595!2.21e-11!130;UBERON:0001007!3.36e-11!128;UBERON:0001555!3.36e-11!128;UBERON:0007026!3.36e-11!128;UBERON:0000485!1.36e-10!11;UBERON:0004921!5.68e-10!126;UBERON:0004185!5.68e-10!126;UBERON:0004923!1.30e-09!24;UBERON:0003350!4.09e-09!9;UBERON:0004808!4.09e-09!9;UBERON:0001277!4.09e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.30e-37,31;UBERON:0000344,4.95e-36,15;UBERON:0001242,5.48e-30,13;UBERON:0001262,5.48e-30,13;UBERON:0004786,5.48e-30,13;UBERON:0005409,1.59e-25,47;UBERON:0004923,2.08e-21,24;UBERON:0003350,8.47e-19,9;UBERON:0004808,8.47e-19,9;UBERON:0001277,8.47e-19,9;UBERON:0000485,3.64e-15,11;UBERON:0001007,1.06e-14,116;UBERON:0001555,1.06e-14,116;UBERON:0007026,1.06e-14,116;UBERON:0004119,2.32e-14,118;UBERON:0000925,2.32e-14,118;UBERON:0006595,2.32e-14,118;UBERON:0002108,3.96e-13,4;UBERON:0004921,3.16e-12,114;UBERON:0000331,1.33e-10,3;UBERON:0002116,1.33e-10,3;UBERON:0001204,1.33e-10,3;UBERON:0001168,1.33e-10,3;UBERON:0003126,9.94e-10,3;UBERON:0001005,9.94e-10,3;UBERON:0007196,9.94e-10,3;UBERON:0001558,9.94e-10,3;UBERON:0001962,1.31e-07,2;UBERON:0001961,1.31e-07,2;UBERON:0001744,1.31e-07,2 | |||
|phase1_expression=0.640595388419176,0.348975407639361,1.36499771816861,2.11724947914781,2.00358291978539,1.84667199103079,2.33612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.17008658030214,0,0,8.63959083084396,10.782236210157,1.72269589234506,3.4460959692726,3.878482188346,19.5724122040065,9.07308467135751,5.98672378769323,0,0,0,2.02196133825892,1.66234645358492,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,3.030874574157,2.53359865475099,3.53867111510348,0.68510327831436,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,0.80673409849337,0.444756087689741,0.760902504450237,4.2707615539006,2.30578536613615,2.76468729680296,1.39269530428806,1.9496408711912,0.898819408654221,3.6743468478698,3.18626037206988,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.971122544619926,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0,2.85152941241944,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:88049831..88049870,+ | |||
}} |
Latest revision as of 11:35, 5 August 2015
Short description: | p@chr17:88049831..88049870, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88049831..88049870, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.46e-21 | 15 |
epithelial cell | 7.74e-20 | 25 |
intestinal epithelial cell | 8.47e-19 | 9 |
epithelial cell of alimentary canal | 8.47e-19 | 9 |
endodermal cell | 2.78e-15 | 20 |
brush border epithelial cell | 2.06e-11 | 6 |
gut absorptive cell | 2.06e-11 | 6 |
enterocyte | 2.06e-11 | 6 |
columnar/cuboidal epithelial cell | 9.49e-10 | 7 |
duct epithelial cell | 9.94e-10 | 3 |
epithelial cell of tracheobronchial tree | 9.94e-10 | 3 |
branched duct epithelial cell | 9.94e-10 | 3 |
epithelial cell of lower respiratory tract | 9.94e-10 | 3 |
respiratory epithelial cell | 9.94e-10 | 3 |
tracheal epithelial cell | 9.94e-10 | 3 |
tracheoblast | 9.94e-10 | 3 |
M cell of gut | 1.30e-09 | 3 |
intestinal crypt stem cell | 3.75e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.30e-37 | 31 |
mucosa | 4.95e-36 | 15 |
intestinal mucosa | 5.48e-30 | 13 |
wall of intestine | 5.48e-30 | 13 |
gastrointestinal system mucosa | 5.48e-30 | 13 |
gastrointestinal system | 1.59e-25 | 47 |
organ component layer | 2.08e-21 | 24 |
epithelium of mucosa | 8.47e-19 | 9 |
gastrointestinal system epithelium | 8.47e-19 | 9 |
intestinal epithelium | 8.47e-19 | 9 |
simple columnar epithelium | 3.64e-15 | 11 |
digestive system | 1.06e-14 | 116 |
digestive tract | 1.06e-14 | 116 |
primitive gut | 1.06e-14 | 116 |
endoderm-derived structure | 2.32e-14 | 118 |
endoderm | 2.32e-14 | 118 |
presumptive endoderm | 2.32e-14 | 118 |
small intestine | 3.96e-13 | 4 |
subdivision of digestive tract | 3.16e-12 | 114 |
ileal mucosa | 1.33e-10 | 3 |
ileum | 1.33e-10 | 3 |
mucosa of small intestine | 1.33e-10 | 3 |
wall of small intestine | 1.33e-10 | 3 |
trachea | 9.94e-10 | 3 |
respiratory airway | 9.94e-10 | 3 |
tracheobronchial tree | 9.94e-10 | 3 |
lower respiratory tract | 9.94e-10 | 3 |
gut-associated lymphoid tissue | 1.31e-07 | 2 |
mucosa-associated lymphoid tissue | 1.31e-07 | 2 |
lymphoid tissue | 1.31e-07 | 2 |