FFCP PHASE1:Mm9::chr17:90855370..90855389,-: Difference between revisions
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{{FFCP|EntrezGene=18189|HGNC=|MCL_coexpression_id=2|UniProt=P0DI97|association_with_transcript=-144bp_to_ENSMUST00000172466_5end|description=CAGE_peak_9_at_Nrxn1_5end|id=chr17:90855370..90855389,-|ontology_enrichment_celltype=CL:0000117!1.50e-16!23;CL:0000337!1.50e-16!23;CL:0000540!9.43e-13!33;CL:0000047!9.43e-13!33;CL:0000031!9.43e-13!33;CL:0000404!9.43e-13!33;CL:0000393!2.50e-09!39;CL:0000211!2.50e-09!39;CL:0000221!3.73e-09!44;CL:0000133!3.73e-09!44;CL:0002319!5.79e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-19,23;CL:0000337,3.94e-19,23;CL:0000540,7.32e-12,33;CL:0000047,7.32e-12,33;CL:0000031,7.32e-12,33;CL:0000404,7.32e-12,33;CL:0000393,2.52e-09,39;CL:0000211,2.52e-09,39;CL:0002319,4.83e-08,43;CL:0000221,9.25e-08,44;CL:0000133,9.25e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.41e-28!73;UBERON:0005743!1.41e-28!73;UBERON:0001049!4.48e-28!52;UBERON:0005068!4.48e-28!52;UBERON:0006241!4.48e-28!52;UBERON:0007135!4.48e-28!52;UBERON:0000073!3.31e-27!75;UBERON:0001016!3.31e-27!75;UBERON:0000955!3.40e-26!50;UBERON:0006238!3.40e-26!50;UBERON:0002616!1.68e-25!49;UBERON:0002020!1.95e-23!34;UBERON:0000033!9.53e-23!63;UBERON:0002346!9.90e-23!71;UBERON:0003075!9.90e-23!71;UBERON:0007284!9.90e-23!71;UBERON:0003080!2.50e-20!40;UBERON:0002780!1.55e-19!39;UBERON:0001890!1.55e-19!39;UBERON:0006240!1.55e-19!39;UBERON:0002791!2.73e-19!29;UBERON:0003528!2.73e-19!29;UBERON:0001893!2.73e-19!29;UBERON:0004121!3.66e-19!102;UBERON:0000924!3.66e-19!102;UBERON:0006601!3.66e-19!102;UBERON:0003056!8.05e-19!49;UBERON:0000956!5.20e-14!21;UBERON:0001869!5.20e-14!21;UBERON:0000203!5.20e-14!21;UBERON:0007811!6.45e-13!86;UBERON:0000153!9.53e-13!94;UBERON:0002619!3.52e-12!17;UBERON:0002021!7.49e-11!10;UBERON:0000411!7.49e-11!10;UBERON:0001950!7.49e-11!10;UBERON:0003076!3.36e-08!12;UBERON:0003057!3.36e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-36,54;UBERON:0001049,1.03e-33,52;UBERON:0005068,1.03e-33,52;UBERON:0006241,1.03e-33,52;UBERON:0007135,1.03e-33,52;UBERON:0001017,7.02e-33,73;UBERON:0002020,3.27e-32,34;UBERON:0001016,1.05e-31,75;UBERON:0000955,8.85e-27,47;UBERON:0006238,8.85e-27,47;UBERON:0002616,1.12e-25,46;UBERON:0002346,1.54e-25,64;UBERON:0003075,1.54e-25,64;UBERON:0007284,1.54e-25,64;UBERON:0003528,4.75e-25,29;UBERON:0002791,4.75e-25,29;UBERON:0001893,4.75e-25,29;UBERON:0004121,1.10e-22,95;UBERON:0000924,1.10e-22,95;UBERON:0006601,1.10e-22,95;UBERON:0003080,4.63e-22,40;UBERON:0002619,7.07e-22,17;UBERON:0010371,3.48e-21,73;UBERON:0002780,8.24e-21,39;UBERON:0001890,8.24e-21,39;UBERON:0006240,8.24e-21,39;UBERON:0000956,1.62e-19,21;UBERON:0001869,1.62e-19,21;UBERON:0000203,1.62e-19,21;UBERON:0002021,2.00e-18,10;UBERON:0000411,2.00e-18,10;UBERON:0001950,2.00e-18,10;UBERON:0003056,1.13e-16,49;UBERON:0010314,8.01e-15,92;UBERON:0003076,3.29e-12,12;UBERON:0003057,3.29e-12,12;UBERON:0000025,3.66e-10,114;UBERON:0002240,1.10e-09,6;UBERON:0005174,1.10e-09,6;UBERON:0001137,1.10e-09,6;UBERON:0004111,6.65e-09,122;UBERON:0001948,1.67e-08,5;UBERON:0002315,1.67e-08,5;UBERON:0000369,5.36e-08,5;UBERON:0002435,5.36e-08,5;UBERON:0000204,5.36e-08,5;UBERON:0010082,5.36e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,3.64169629547276,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.210324961351382,1.71390590642282,2.42955395046775,3.79721477566358,2.77951865952885,4.5960939330501,1.10115880999389,6.89511625660014,5.37622866396852,4.3522474950964,2.37867873366265,2.6045668527838,0.558365998002762,0.56276261003168,1.98637722109853,6.18720029494702,5.41012387036591,5.96478226640962,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,12.0040126774734,16.546289838263,0,0,0,0,3.74476598512057,1.37250180845588,4.77486538028885,15.4703644971126,17.9000820131231,5.194701113989,5.84068547043927,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.768682321709099,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.15434922846191,4.93942139420565,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.809621403349789,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,11.5081309126794,10.8850147553485,20.2786755165551,21.9226406326606,22.661816921691,15.5255175053315,13.9599572999508,16.3131267234314,12.4262474820437,0.207574695168353,0,0.682934423016537,1.45864030240976,0.628839487883947,0.919217542250071,1.11123363900808,1.03017528619447,1.28367683836726,0.252697211763798,1.2673964994512,0.754505365544305,0.842773567228942,0.768301828858431,0.746661096422973,0.476293691283074,0.347652977834566,0.192909220463705,0,1.03039244094078,0,0.70990322463735,0.238436189947321,1.16277133305863,0.470546902076653,1.18460451048347,0.365855945745545,1.05227884575137,0.814824683075171,1.68342681497322,1.30498519936592,0.788035859004508,1.22769312950907,0.464810523557898,0.771626443924566,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0,0|short_description=p9@Nrxn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18189 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P0DI97 | |||
|association_with_transcript=-144bp_to_ENSMUST00000172466_5end | |||
|cluster_id=chr17:90855370..90855389,- | |||
|description=CAGE_peak_9_at_Nrxn1_5end | |||
|id=chr17:90855370..90855389,- | |||
|ontology_enrichment_celltype=CL:0000117!1.50e-16!23;CL:0000337!1.50e-16!23;CL:0000540!9.43e-13!33;CL:0000047!9.43e-13!33;CL:0000031!9.43e-13!33;CL:0000404!9.43e-13!33;CL:0000393!2.50e-09!39;CL:0000211!2.50e-09!39;CL:0000221!3.73e-09!44;CL:0000133!3.73e-09!44;CL:0002319!5.79e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-19,23;CL:0000337,3.94e-19,23;CL:0000540,7.32e-12,33;CL:0000047,7.32e-12,33;CL:0000031,7.32e-12,33;CL:0000404,7.32e-12,33;CL:0000393,2.52e-09,39;CL:0000211,2.52e-09,39;CL:0002319,4.83e-08,43;CL:0000221,9.25e-08,44;CL:0000133,9.25e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-28!73;UBERON:0005743!1.41e-28!73;UBERON:0001049!4.48e-28!52;UBERON:0005068!4.48e-28!52;UBERON:0006241!4.48e-28!52;UBERON:0007135!4.48e-28!52;UBERON:0000073!3.31e-27!75;UBERON:0001016!3.31e-27!75;UBERON:0000955!3.40e-26!50;UBERON:0006238!3.40e-26!50;UBERON:0002616!1.68e-25!49;UBERON:0002020!1.95e-23!34;UBERON:0000033!9.53e-23!63;UBERON:0002346!9.90e-23!71;UBERON:0003075!9.90e-23!71;UBERON:0007284!9.90e-23!71;UBERON:0003080!2.50e-20!40;UBERON:0002780!1.55e-19!39;UBERON:0001890!1.55e-19!39;UBERON:0006240!1.55e-19!39;UBERON:0002791!2.73e-19!29;UBERON:0003528!2.73e-19!29;UBERON:0001893!2.73e-19!29;UBERON:0004121!3.66e-19!102;UBERON:0000924!3.66e-19!102;UBERON:0006601!3.66e-19!102;UBERON:0003056!8.05e-19!49;UBERON:0000956!5.20e-14!21;UBERON:0001869!5.20e-14!21;UBERON:0000203!5.20e-14!21;UBERON:0007811!6.45e-13!86;UBERON:0000153!9.53e-13!94;UBERON:0002619!3.52e-12!17;UBERON:0002021!7.49e-11!10;UBERON:0000411!7.49e-11!10;UBERON:0001950!7.49e-11!10;UBERON:0003076!3.36e-08!12;UBERON:0003057!3.36e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.47e-36,54;UBERON:0001049,1.03e-33,52;UBERON:0005068,1.03e-33,52;UBERON:0006241,1.03e-33,52;UBERON:0007135,1.03e-33,52;UBERON:0001017,7.02e-33,73;UBERON:0002020,3.27e-32,34;UBERON:0001016,1.05e-31,75;UBERON:0000955,8.85e-27,47;UBERON:0006238,8.85e-27,47;UBERON:0002616,1.12e-25,46;UBERON:0002346,1.54e-25,64;UBERON:0003075,1.54e-25,64;UBERON:0007284,1.54e-25,64;UBERON:0003528,4.75e-25,29;UBERON:0002791,4.75e-25,29;UBERON:0001893,4.75e-25,29;UBERON:0004121,1.10e-22,95;UBERON:0000924,1.10e-22,95;UBERON:0006601,1.10e-22,95;UBERON:0003080,4.63e-22,40;UBERON:0002619,7.07e-22,17;UBERON:0010371,3.48e-21,73;UBERON:0002780,8.24e-21,39;UBERON:0001890,8.24e-21,39;UBERON:0006240,8.24e-21,39;UBERON:0000956,1.62e-19,21;UBERON:0001869,1.62e-19,21;UBERON:0000203,1.62e-19,21;UBERON:0002021,2.00e-18,10;UBERON:0000411,2.00e-18,10;UBERON:0001950,2.00e-18,10;UBERON:0003056,1.13e-16,49;UBERON:0010314,8.01e-15,92;UBERON:0003076,3.29e-12,12;UBERON:0003057,3.29e-12,12;UBERON:0000025,3.66e-10,114;UBERON:0002240,1.10e-09,6;UBERON:0005174,1.10e-09,6;UBERON:0001137,1.10e-09,6;UBERON:0004111,6.65e-09,122;UBERON:0001948,1.67e-08,5;UBERON:0002315,1.67e-08,5;UBERON:0000369,5.36e-08,5;UBERON:0002435,5.36e-08,5;UBERON:0000204,5.36e-08,5;UBERON:0010082,5.36e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,3.64169629547276,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.210324961351382,1.71390590642282,2.42955395046775,3.79721477566358,2.77951865952885,4.5960939330501,1.10115880999389,6.89511625660014,5.37622866396852,4.3522474950964,2.37867873366265,2.6045668527838,0.558365998002762,0.56276261003168,1.98637722109853,6.18720029494702,5.41012387036591,5.96478226640962,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,12.0040126774734,16.546289838263,0,0,0,0,3.74476598512057,1.37250180845588,4.77486538028885,15.4703644971126,17.9000820131231,5.194701113989,5.84068547043927,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.768682321709099,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.15434922846191,4.93942139420565,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.28440471990234,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.809621403349789,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,11.5081309126794,10.8850147553485,20.2786755165551,21.9226406326606,22.661816921691,15.5255175053315,13.9599572999508,16.3131267234314,12.4262474820437,0.207574695168353,0,0.682934423016537,1.45864030240976,0.628839487883947,0.919217542250071,1.11123363900808,1.03017528619447,1.28367683836726,0.252697211763798,1.2673964994512,0.754505365544305,0.842773567228942,0.768301828858431,0.746661096422973,0.476293691283074,0.347652977834566,0.192909220463705,0,1.03039244094078,0,0.70990322463735,0.238436189947321,1.16277133305863,0.470546902076653,1.18460451048347,0.365855945745545,1.05227884575137,0.814824683075171,1.68342681497322,1.30498519936592,0.788035859004508,1.22769312950907,0.464810523557898,0.771626443924566,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0,0 | |||
|short_description=p9@Nrxn1 | |||
}} |
Revision as of 12:05, 5 August 2015
Short description: | p9@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -144bp_to_ENSMUST00000172466_5end |
EntrezGene: | 18189 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.94e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.94e-19 | 23 |
neuron | 7.32e-12 | 33 |
neuronal stem cell | 7.32e-12 | 33 |
neuroblast | 7.32e-12 | 33 |
electrically signaling cell | 7.32e-12 | 33 |
electrically responsive cell | 2.52e-09 | 39 |
electrically active cell | 2.52e-09 | 39 |
neural cell | 4.83e-08 | 43 |
ectodermal cell | 9.25e-08 | 44 |
neurectodermal cell | 9.25e-08 | 44 |