FFCP PHASE1:Mm9::chr1:20880676..20880698,+: Difference between revisions
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{{FFCP|EntrezGene=74229|HGNC=|MCL_coexpression_id=1|UniProt=Q80ZE5|association_with_transcript=0bp_to_ENSMUST00000068880,ENSMUST00000163700_5end|description=CAGE_peak_1_at_Paqr8_5end|id=chr1:20880676..20880698,+|ontology_enrichment_celltype=CL:0000221!8.13e-16!44;CL:0000133!8.13e-16!44;CL:0002319!2.22e-15!43;CL:0000055!8.95e-15!50;CL:0000540!1.76e-12!33;CL:0000047!1.76e-12!33;CL:0000031!1.76e-12!33;CL:0000404!1.76e-12!33;CL:0000393!5.04e-12!39;CL:0000211!5.04e-12!39;CL:0000117!2.45e-09!23;CL:0000337!2.45e-09!23;CL:0002321!2.00e-08!70;CL:0000220!2.00e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,6.93e-16,44;CL:0000133,6.93e-16,44;CL:0002319,1.93e-15,43;CL:0000540,1.78e-12,33;CL:0000047,1.78e-12,33;CL:0000031,1.78e-12,33;CL:0000404,1.78e-12,33;CL:0000393,4.94e-12,39;CL:0000211,4.94e-12,39;CL:0000117,2.89e-09,23;CL:0000337,2.89e-09,23;CL:0002321,5.79e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.44e-30!73;UBERON:0005743!1.44e-30!73;UBERON:0004121!1.91e-30!102;UBERON:0000924!1.91e-30!102;UBERON:0006601!1.91e-30!102;UBERON:0000073!2.36e-30!75;UBERON:0001016!2.36e-30!75;UBERON:0002346!5.61e-22!71;UBERON:0003075!5.61e-22!71;UBERON:0007284!5.61e-22!71;UBERON:0001049!1.74e-20!52;UBERON:0005068!1.74e-20!52;UBERON:0006241!1.74e-20!52;UBERON:0007135!1.74e-20!52;UBERON:0000955!1.53e-19!50;UBERON:0006238!1.53e-19!50;UBERON:0002616!6.61e-19!49;UBERON:0000033!1.92e-16!63;UBERON:0002020!1.69e-15!34;UBERON:0003080!7.76e-14!40;UBERON:0002780!3.39e-13!39;UBERON:0001890!3.39e-13!39;UBERON:0006240!3.39e-13!39;UBERON:0002791!9.52e-13!29;UBERON:0003528!9.52e-13!29;UBERON:0001893!9.52e-13!29;UBERON:0003056!1.08e-11!49;UBERON:0000956!1.03e-08!21;UBERON:0001869!1.03e-08!21;UBERON:0000203!1.03e-08!21;UBERON:0003076!1.35e-07!12;UBERON:0003057!1.35e-07!12;UBERON:0007811!1.42e-07!86;UBERON:0002619!1.84e-07!17;UBERON:0000153!3.52e-07!94;UBERON:0002021!6.95e-07!10;UBERON:0000411!6.95e-07!10;UBERON:0001950!6.95e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.26e-31,73;UBERON:0001016,1.03e-30,75;UBERON:0004121,1.59e-27,95;UBERON:0000924,1.59e-27,95;UBERON:0006601,1.59e-27,95;UBERON:0000073,5.05e-22,54;UBERON:0001049,1.22e-20,52;UBERON:0005068,1.22e-20,52;UBERON:0006241,1.22e-20,52;UBERON:0007135,1.22e-20,52;UBERON:0010371,1.40e-19,73;UBERON:0002346,4.81e-19,64;UBERON:0003075,4.81e-19,64;UBERON:0007284,4.81e-19,64;UBERON:0000955,1.31e-17,47;UBERON:0006238,1.31e-17,47;UBERON:0002616,5.59e-17,46;UBERON:0002020,1.56e-15,34;UBERON:0010314,2.67e-15,92;UBERON:0003080,7.19e-14,40;UBERON:0002780,3.22e-13,39;UBERON:0001890,3.22e-13,39;UBERON:0006240,3.22e-13,39;UBERON:0003528,9.87e-13,29;UBERON:0002791,9.87e-13,29;UBERON:0001893,9.87e-13,29;UBERON:0003056,1.02e-11,49;UBERON:0000956,1.25e-08,21;UBERON:0001869,1.25e-08,21;UBERON:0000203,1.25e-08,21;UBERON:0003076,9.93e-08,12;UBERON:0003057,9.93e-08,12;UBERON:0002619,2.41e-07,17;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10|phase1_expression=7.20669811971573,0.348975407639361,0.454999239389536,0.60492842261366,0,1.00727563147134,0.233612640595526,2.45334314538995,1.40788722151667,0.70219357896598,0,0,2.9104124088305,1.48614684112296,0.666219523631325,0,0.699561878128147,0.630924330716475,0.274228867211478,0,11.1406710097901,1.39007331681239,1.30599894569468,3.67982572424835,5.50582274561208,0.57423196411502,0,0.215471232685889,0.190023419456374,0,1.33038306393183,0,0,0,0.577703239502549,0,1.42918549383658,0,0,0.523523743973798,0.588231488031014,0,0,1.88845226963366,2.33166941804883,3.67093504323363,3.12956537739216,28.5612954858385,28.1198313900124,25.4703167787311,17.358316281545,34.5006154475932,0.167782606057736,0,1.68046899571232,7.20326420900652,4.01146815914259,9.28209766099396,11.5320382689971,16.398720357433,13.3104594736298,6.43804610931351,4.4464739805557,0,1.97773272513395,1.4209602298922,20.6724076257699,19.5951335713993,8.19147937236973,13.2305819565057,7.99234853135252,55.9875929431455,48.1493419274518,3.79721477566358,2.97120960156533,0.919218786610021,67.1706874096271,69.0788499040866,80.6434299595278,23.2119866405141,21.8655468209759,26.045668527838,71.4708477443535,45.0210088025344,56.3825534296429,37.4178303551558,43.4233626437264,18.2671456908795,1.8931548333296,6.65029728939713,6.66688324013859,2.58127163094416,0,0,0,0.448026887097336,2.94933282276679,1.02258193546835,0.519572009205738,1.06001872353102,18.4504879907451,5.13305909657271,2.54805239706646,7.11066703153331,16.0203370348298,18.7486300451573,24.2651733607096,3.08296475241462,0.517875767294343,33.2510391505207,7.11289839741157,13.0920155674221,14.7593918243877,20.347556474604,16.6975964132701,25.7616512225835,4.94389935468748,0.433798070759735,1.76922110389975,1.13236794963186,0.883366073841574,0,11.1835056730873,82.2714039602448,92.7848911183606,0.510914110417183,0.958520996047362,1.79970819298022,1.01656181658452,77.8911324905078,48.952564501593,12.3141265070607,47.2802150922992,35.0330176542553,70.85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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74229 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80ZE5 | |||
|association_with_transcript=0bp_to_ENSMUST00000068880,ENSMUST00000163700_5end | |||
|cluster_id=chr1:20880676..20880698,+ | |||
|description=CAGE_peak_1_at_Paqr8_5end | |||
|id=chr1:20880676..20880698,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.13e-16!44;CL:0000133!8.13e-16!44;CL:0002319!2.22e-15!43;CL:0000055!8.95e-15!50;CL:0000540!1.76e-12!33;CL:0000047!1.76e-12!33;CL:0000031!1.76e-12!33;CL:0000404!1.76e-12!33;CL:0000393!5.04e-12!39;CL:0000211!5.04e-12!39;CL:0000117!2.45e-09!23;CL:0000337!2.45e-09!23;CL:0002321!2.00e-08!70;CL:0000220!2.00e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.93e-16,44;CL:0000133,6.93e-16,44;CL:0002319,1.93e-15,43;CL:0000540,1.78e-12,33;CL:0000047,1.78e-12,33;CL:0000031,1.78e-12,33;CL:0000404,1.78e-12,33;CL:0000393,4.94e-12,39;CL:0000211,4.94e-12,39;CL:0000117,2.89e-09,23;CL:0000337,2.89e-09,23;CL:0002321,5.79e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-30!73;UBERON:0005743!1.44e-30!73;UBERON:0004121!1.91e-30!102;UBERON:0000924!1.91e-30!102;UBERON:0006601!1.91e-30!102;UBERON:0000073!2.36e-30!75;UBERON:0001016!2.36e-30!75;UBERON:0002346!5.61e-22!71;UBERON:0003075!5.61e-22!71;UBERON:0007284!5.61e-22!71;UBERON:0001049!1.74e-20!52;UBERON:0005068!1.74e-20!52;UBERON:0006241!1.74e-20!52;UBERON:0007135!1.74e-20!52;UBERON:0000955!1.53e-19!50;UBERON:0006238!1.53e-19!50;UBERON:0002616!6.61e-19!49;UBERON:0000033!1.92e-16!63;UBERON:0002020!1.69e-15!34;UBERON:0003080!7.76e-14!40;UBERON:0002780!3.39e-13!39;UBERON:0001890!3.39e-13!39;UBERON:0006240!3.39e-13!39;UBERON:0002791!9.52e-13!29;UBERON:0003528!9.52e-13!29;UBERON:0001893!9.52e-13!29;UBERON:0003056!1.08e-11!49;UBERON:0000956!1.03e-08!21;UBERON:0001869!1.03e-08!21;UBERON:0000203!1.03e-08!21;UBERON:0003076!1.35e-07!12;UBERON:0003057!1.35e-07!12;UBERON:0007811!1.42e-07!86;UBERON:0002619!1.84e-07!17;UBERON:0000153!3.52e-07!94;UBERON:0002021!6.95e-07!10;UBERON:0000411!6.95e-07!10;UBERON:0001950!6.95e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.26e-31,73;UBERON:0001016,1.03e-30,75;UBERON:0004121,1.59e-27,95;UBERON:0000924,1.59e-27,95;UBERON:0006601,1.59e-27,95;UBERON:0000073,5.05e-22,54;UBERON:0001049,1.22e-20,52;UBERON:0005068,1.22e-20,52;UBERON:0006241,1.22e-20,52;UBERON:0007135,1.22e-20,52;UBERON:0010371,1.40e-19,73;UBERON:0002346,4.81e-19,64;UBERON:0003075,4.81e-19,64;UBERON:0007284,4.81e-19,64;UBERON:0000955,1.31e-17,47;UBERON:0006238,1.31e-17,47;UBERON:0002616,5.59e-17,46;UBERON:0002020,1.56e-15,34;UBERON:0010314,2.67e-15,92;UBERON:0003080,7.19e-14,40;UBERON:0002780,3.22e-13,39;UBERON:0001890,3.22e-13,39;UBERON:0006240,3.22e-13,39;UBERON:0003528,9.87e-13,29;UBERON:0002791,9.87e-13,29;UBERON:0001893,9.87e-13,29;UBERON:0003056,1.02e-11,49;UBERON:0000956,1.25e-08,21;UBERON:0001869,1.25e-08,21;UBERON:0000203,1.25e-08,21;UBERON:0003076,9.93e-08,12;UBERON:0003057,9.93e-08,12;UBERON:0002619,2.41e-07,17;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10 | |||
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| |||
|short_description=p1@Paqr8 | |||
}} |
Revision as of 13:10, 5 August 2015
Short description: | p1@Paqr8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Paqr8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000068880, ENSMUST00000163700_5end |
EntrezGene: | 74229 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.93e-16 | 44 |
neurectodermal cell | 6.93e-16 | 44 |
neural cell | 1.93e-15 | 43 |
neuron | 1.78e-12 | 33 |
neuronal stem cell | 1.78e-12 | 33 |
neuroblast | 1.78e-12 | 33 |
electrically signaling cell | 1.78e-12 | 33 |
electrically responsive cell | 4.94e-12 | 39 |
electrically active cell | 4.94e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.89e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.89e-09 | 23 |
embryonic cell | 5.79e-09 | 70 |