FFCP PHASE1:Mm9::chr7:82454074..82454085,-: Difference between revisions
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{{FFCP|EntrezGene=64176|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG39|association_with_transcript=62bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end|description=CAGE_peak_9_at_Sv2b_5end|id=chr7:82454074..82454085,-|ontology_enrichment_celltype=CL:0000540!5.05e-13!33;CL:0000047!5.05e-13!33;CL:0000031!5.05e-13!33;CL:0000404!5.05e-13!33;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000393!1.80e-09!39;CL:0000211!1.80e-09!39;CL:0000221!1.95e-09!44;CL:0000133!1.95e-09!44;CL:0002319!6.41e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.60e-09,23;CL:0000337,4.60e-09,23;CL:0002610,5.58e-07,3;CL:0002614,6.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.98e-28!63;UBERON:0002346!4.50e-27!71;UBERON:0003075!4.50e-27!71;UBERON:0007284!4.50e-27!71;UBERON:0001017!6.04e-27!73;UBERON:0005743!6.04e-27!73;UBERON:0004121!1.25e-26!102;UBERON:0000924!1.25e-26!102;UBERON:0006601!1.25e-26!102;UBERON:0000073!1.91e-26!75;UBERON:0001016!1.91e-26!75;UBERON:0001049!4.83e-25!52;UBERON:0005068!4.83e-25!52;UBERON:0006241!4.83e-25!52;UBERON:0007135!4.83e-25!52;UBERON:0003056!1.07e-24!49;UBERON:0000955!1.72e-23!50;UBERON:0006238!1.72e-23!50;UBERON:0002616!1.11e-22!49;UBERON:0002020!5.91e-22!34;UBERON:0007811!5.20e-19!86;UBERON:0003080!6.35e-19!40;UBERON:0000153!1.56e-18!94;UBERON:0002780!3.17e-18!39;UBERON:0001890!3.17e-18!39;UBERON:0006240!3.17e-18!39;UBERON:0002791!4.37e-18!29;UBERON:0003528!4.37e-18!29;UBERON:0001893!4.37e-18!29;UBERON:0000956!7.81e-13!21;UBERON:0001869!7.81e-13!21;UBERON:0000203!7.81e-13!21;UBERON:0002619!1.12e-10!17;UBERON:0002021!2.17e-10!10;UBERON:0000411!2.17e-10!10;UBERON:0001950!2.17e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.46e-34,64;UBERON:0003075,2.46e-34,64;UBERON:0007284,2.46e-34,64;UBERON:0000073,3.24e-34,54;UBERON:0001049,6.29e-31,52;UBERON:0005068,6.29e-31,52;UBERON:0006241,6.29e-31,52;UBERON:0007135,6.29e-31,52;UBERON:0010371,3.61e-29,73;UBERON:0002020,1.87e-28,34;UBERON:0004121,3.48e-27,95;UBERON:0000924,3.48e-27,95;UBERON:0006601,3.48e-27,95;UBERON:0001017,3.51e-27,73;UBERON:0001016,2.95e-26,75;UBERON:0003056,7.16e-26,49;UBERON:0000955,4.05e-25,47;UBERON:0006238,4.05e-25,47;UBERON:0002616,1.47e-23,46;UBERON:0002021,1.62e-23,10;UBERON:0000411,1.62e-23,10;UBERON:0001950,1.62e-23,10;UBERON:0003528,1.73e-22,29;UBERON:0002791,1.73e-22,29;UBERON:0001893,1.73e-22,29;UBERON:0010314,1.42e-21,92;UBERON:0003080,7.71e-21,40;UBERON:0002780,1.82e-19,39;UBERON:0001890,1.82e-19,39;UBERON:0006240,1.82e-19,39;UBERON:0002619,1.60e-18,17;UBERON:0000956,2.98e-17,21;UBERON:0001869,2.98e-17,21;UBERON:0000203,2.98e-17,21;UBERON:0003076,1.31e-10,12;UBERON:0003057,1.31e-10,12;UBERON:0000025,2.21e-10,114;UBERON:0004111,2.93e-09,122;UBERON:0002240,4.93e-09,6;UBERON:0005174,4.93e-09,6;UBERON:0001137,4.93e-09,6;UBERON:0002950,1.52e-08,4;UBERON:0001891,1.52e-08,4;UBERON:0009616,1.52e-08,4;UBERON:0010286,1.52e-08,4;UBERON:0000483,8.39e-08,174;UBERON:0000119,1.26e-07,176;UBERON:0001948,2.94e-07,5;UBERON:0002315,2.94e-07,5;UBERON:0004684,5.58e-07,3;UBERON:0002275,5.58e-07,3;UBERON:0002038,6.16e-07,3;UBERON:0009663,6.16e-07,3;UBERON:0009661,6.16e-07,3;UBERON:0000125,6.16e-07,3;UBERON:0002308,6.16e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,2.28520787523043,2.20868540951614,0.61245399607477,0.575072826109418,0,2.20231761998777,1.53224805702225,1.84327839907492,0.791317726381163,0.548925861614458,1.04182674111352,1.11673199600552,1.68828783009504,2.90316670775939,2.06240009831567,1.70846016958924,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,6.0739544975902,0,0,0,0,1.19832511523858,2.28750301409313,0.376963056338593,7.47444576826789,6.39288643325826,1.0389402227978,2.75810147215188,0,0,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,1.76894897793452,3.33095672740609,2.52994656311268,1.55222022443409,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.790575555893047,1.92792789853084,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0.596044064343795,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.750729901804728,1.83151624267265,0,0,2.82375921308533,4.14292712856459,4.58316410751517,4.1244763762485,4.7955776383945,6.0431511791176,9.45031500324528,3.60256962579376,4.53142408984205,3.10656187051092,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0.231768651889711,0,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p9@Sv2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64176 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG39 | |||
|association_with_transcript=62bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end | |||
|cluster_id=chr7:82454074..82454085,- | |||
|description=CAGE_peak_9_at_Sv2b_5end | |||
|id=chr7:82454074..82454085,- | |||
|ontology_enrichment_celltype=CL:0000540!5.05e-13!33;CL:0000047!5.05e-13!33;CL:0000031!5.05e-13!33;CL:0000404!5.05e-13!33;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000393!1.80e-09!39;CL:0000211!1.80e-09!39;CL:0000221!1.95e-09!44;CL:0000133!1.95e-09!44;CL:0002319!6.41e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.60e-09,23;CL:0000337,4.60e-09,23;CL:0002610,5.58e-07,3;CL:0002614,6.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.98e-28!63;UBERON:0002346!4.50e-27!71;UBERON:0003075!4.50e-27!71;UBERON:0007284!4.50e-27!71;UBERON:0001017!6.04e-27!73;UBERON:0005743!6.04e-27!73;UBERON:0004121!1.25e-26!102;UBERON:0000924!1.25e-26!102;UBERON:0006601!1.25e-26!102;UBERON:0000073!1.91e-26!75;UBERON:0001016!1.91e-26!75;UBERON:0001049!4.83e-25!52;UBERON:0005068!4.83e-25!52;UBERON:0006241!4.83e-25!52;UBERON:0007135!4.83e-25!52;UBERON:0003056!1.07e-24!49;UBERON:0000955!1.72e-23!50;UBERON:0006238!1.72e-23!50;UBERON:0002616!1.11e-22!49;UBERON:0002020!5.91e-22!34;UBERON:0007811!5.20e-19!86;UBERON:0003080!6.35e-19!40;UBERON:0000153!1.56e-18!94;UBERON:0002780!3.17e-18!39;UBERON:0001890!3.17e-18!39;UBERON:0006240!3.17e-18!39;UBERON:0002791!4.37e-18!29;UBERON:0003528!4.37e-18!29;UBERON:0001893!4.37e-18!29;UBERON:0000956!7.81e-13!21;UBERON:0001869!7.81e-13!21;UBERON:0000203!7.81e-13!21;UBERON:0002619!1.12e-10!17;UBERON:0002021!2.17e-10!10;UBERON:0000411!2.17e-10!10;UBERON:0001950!2.17e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.46e-34,64;UBERON:0003075,2.46e-34,64;UBERON:0007284,2.46e-34,64;UBERON:0000073,3.24e-34,54;UBERON:0001049,6.29e-31,52;UBERON:0005068,6.29e-31,52;UBERON:0006241,6.29e-31,52;UBERON:0007135,6.29e-31,52;UBERON:0010371,3.61e-29,73;UBERON:0002020,1.87e-28,34;UBERON:0004121,3.48e-27,95;UBERON:0000924,3.48e-27,95;UBERON:0006601,3.48e-27,95;UBERON:0001017,3.51e-27,73;UBERON:0001016,2.95e-26,75;UBERON:0003056,7.16e-26,49;UBERON:0000955,4.05e-25,47;UBERON:0006238,4.05e-25,47;UBERON:0002616,1.47e-23,46;UBERON:0002021,1.62e-23,10;UBERON:0000411,1.62e-23,10;UBERON:0001950,1.62e-23,10;UBERON:0003528,1.73e-22,29;UBERON:0002791,1.73e-22,29;UBERON:0001893,1.73e-22,29;UBERON:0010314,1.42e-21,92;UBERON:0003080,7.71e-21,40;UBERON:0002780,1.82e-19,39;UBERON:0001890,1.82e-19,39;UBERON:0006240,1.82e-19,39;UBERON:0002619,1.60e-18,17;UBERON:0000956,2.98e-17,21;UBERON:0001869,2.98e-17,21;UBERON:0000203,2.98e-17,21;UBERON:0003076,1.31e-10,12;UBERON:0003057,1.31e-10,12;UBERON:0000025,2.21e-10,114;UBERON:0004111,2.93e-09,122;UBERON:0002240,4.93e-09,6;UBERON:0005174,4.93e-09,6;UBERON:0001137,4.93e-09,6;UBERON:0002950,1.52e-08,4;UBERON:0001891,1.52e-08,4;UBERON:0009616,1.52e-08,4;UBERON:0010286,1.52e-08,4;UBERON:0000483,8.39e-08,174;UBERON:0000119,1.26e-07,176;UBERON:0001948,2.94e-07,5;UBERON:0002315,2.94e-07,5;UBERON:0004684,5.58e-07,3;UBERON:0002275,5.58e-07,3;UBERON:0002038,6.16e-07,3;UBERON:0009663,6.16e-07,3;UBERON:0009661,6.16e-07,3;UBERON:0000125,6.16e-07,3;UBERON:0002308,6.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,2.28520787523043,2.20868540951614,0.61245399607477,0.575072826109418,0,2.20231761998777,1.53224805702225,1.84327839907492,0.791317726381163,0.548925861614458,1.04182674111352,1.11673199600552,1.68828783009504,2.90316670775939,2.06240009831567,1.70846016958924,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,6.0739544975902,0,0,0,0,1.19832511523858,2.28750301409313,0.376963056338593,7.47444576826789,6.39288643325826,1.0389402227978,2.75810147215188,0,0,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,1.76894897793452,3.33095672740609,2.52994656311268,1.55222022443409,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.790575555893047,1.92792789853084,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0.596044064343795,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.750729901804728,1.83151624267265,0,0,2.82375921308533,4.14292712856459,4.58316410751517,4.1244763762485,4.7955776383945,6.0431511791176,9.45031500324528,3.60256962579376,4.53142408984205,3.10656187051092,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0.231768651889711,0,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p9@Sv2b | |||
}} | |||
Revision as of 14:09, 5 August 2015
| Short description: | p9@Sv2b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Sv2b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | 62bp_to_ENSMUST00000165175, NM_153579, uc009hwl.1_5end |
| EntrezGene: | 64176 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 4.60e-09 | 23 |
| neuroblast (sensu Vertebrata) | 4.60e-09 | 23 |
| raphe nuclei neuron | 5.58e-07 | 3 |
| neuron of the substantia nigra | 6.16e-07 | 3 |