FFCP PHASE1:Mm9::chr13:112773234..112773267,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:112773234..112773267,+|id=chr13:112773234..112773267,+|ontology_enrichment_celltype=CL:0000553!1.30e-24!6;CL:0000556!1.30e-24!6;CL:0000050!3.08e-16!9;CL:0002031!8.32e-15!25;CL:0000414!3.47e-13!11;CL:0002027!7.86e-13!3;CL:0002006!7.86e-13!3;CL:0002024!7.86e-13!3;CL:0000988!3.38e-11!32;CL:0002032!3.38e-11!32;CL:0000037!3.38e-11!32;CL:0000566!3.38e-11!32;CL:0000837!3.38e-11!32;CL:0000839!4.54e-11!13;CL:0000763!6.97e-09!16;CL:0000049!2.19e-07!19;CL:0002320!2.82e-07!46;CL:0000134!2.82e-07!46|ontology_enrichment_celltype_v019_2=CL:0000553,4.72e-39,6;CL:0000556,4.72e-39,6;CL:0000050,2.65e-26,9;CL:0002031,2.66e-21,25;CL:0000839,1.97e-18,13;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000763,4.24e-15,16;CL:0000049,8.22e-13,19;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!7.22e-11!22;UBERON:0004765!7.22e-11!22;UBERON:0001434!7.22e-11!22;UBERON:0002371!6.97e-09!16;UBERON:0002193!3.72e-08!48;UBERON:0002384!2.82e-07!46;UBERON:0002390!3.29e-07!45;UBERON:0003061!3.29e-07!45;UBERON:0002204!4.15e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.24e-15,16;UBERON:0002384,8.56e-12,46;UBERON:0001474,3.83e-11,22;UBERON:0004765,3.83e-11,22;UBERON:0001434,3.83e-11,22;UBERON:0002204,8.04e-08,32|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0.699561878128147,8.83294063003066,6.44437837946972,7.63901373236454,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,24.6640430904872,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:112773234..112773267,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:112773234..112773267,+ | |||
|description=CAGE_peak_at_chr13:112773234..112773267,+ | |||
|id=chr13:112773234..112773267,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.30e-24!6;CL:0000556!1.30e-24!6;CL:0000050!3.08e-16!9;CL:0002031!8.32e-15!25;CL:0000414!3.47e-13!11;CL:0002027!7.86e-13!3;CL:0002006!7.86e-13!3;CL:0002024!7.86e-13!3;CL:0000988!3.38e-11!32;CL:0002032!3.38e-11!32;CL:0000037!3.38e-11!32;CL:0000566!3.38e-11!32;CL:0000837!3.38e-11!32;CL:0000839!4.54e-11!13;CL:0000763!6.97e-09!16;CL:0000049!2.19e-07!19;CL:0002320!2.82e-07!46;CL:0000134!2.82e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.72e-39,6;CL:0000556,4.72e-39,6;CL:0000050,2.65e-26,9;CL:0002031,2.66e-21,25;CL:0000839,1.97e-18,13;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000763,4.24e-15,16;CL:0000049,8.22e-13,19;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.22e-11!22;UBERON:0004765!7.22e-11!22;UBERON:0001434!7.22e-11!22;UBERON:0002371!6.97e-09!16;UBERON:0002193!3.72e-08!48;UBERON:0002384!2.82e-07!46;UBERON:0002390!3.29e-07!45;UBERON:0003061!3.29e-07!45;UBERON:0002204!4.15e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.24e-15,16;UBERON:0002384,8.56e-12,46;UBERON:0001474,3.83e-11,22;UBERON:0004765,3.83e-11,22;UBERON:0001434,3.83e-11,22;UBERON:0002204,8.04e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0.699561878128147,8.83294063003066,6.44437837946972,7.63901373236454,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,24.6640430904872,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:112773234..112773267,+ | |||
}} |
Latest revision as of 14:41, 5 August 2015
Short description: | p@chr13:112773234..112773267, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:112773234..112773267, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.72e-39 | 6 |
megakaryocyte | 4.72e-39 | 6 |
megakaryocyte-erythroid progenitor cell | 2.65e-26 | 9 |
hematopoietic lineage restricted progenitor cell | 2.66e-21 | 25 |
myeloid lineage restricted progenitor cell | 1.97e-18 | 13 |
hematopoietic cell | 9.31e-17 | 32 |
hematopoietic oligopotent progenitor cell | 9.31e-17 | 32 |
hematopoietic stem cell | 9.31e-17 | 32 |
hematopoietic multipotent progenitor cell | 9.31e-17 | 32 |
lymphocyte of B lineage | 3.44e-16 | 1 |
B cell | 3.44e-16 | 1 |
pro-B cell | 3.44e-16 | 1 |
myeloid cell | 4.24e-15 | 16 |
common myeloid progenitor | 8.22e-13 | 19 |
connective tissue cell | 8.56e-12 | 46 |
mesenchymal cell | 8.56e-12 | 46 |
motile cell | 4.19e-10 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.24e-15 | 16 |
connective tissue | 8.56e-12 | 46 |
bone element | 3.83e-11 | 22 |
skeletal element | 3.83e-11 | 22 |
skeletal system | 3.83e-11 | 22 |
musculoskeletal system | 8.04e-08 | 32 |