FFCP PHASE1:Mm9::chr15:78994907..78994926,-: Difference between revisions
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{{FFCP|EntrezGene=20665|HGNC=|MCL_coexpression_id=107|UniProt=Q04888,E9Q1M0|association_with_transcript=0bp_to_ENSMUST00000040019,ENSMUST00000089349,NM_011437_5end|description=CAGE_peak_1_at_Sox10_5end|id=chr15:78994907..78994926,-|ontology_enrichment_celltype=CL:0000540!9.80e-09!33;CL:0000047!9.80e-09!33;CL:0000031!9.80e-09!33;CL:0000404!9.80e-09!33;CL:0000221!1.16e-07!44;CL:0000133!1.16e-07!44;CL:0000107!1.26e-07!9;CL:0002319!3.80e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-08,33;CL:0000047,1.91e-08,33;CL:0000031,1.91e-08,33;CL:0000404,1.91e-08,33;CL:0000107,4.85e-08,9;CL:0000221,9.15e-08,44;CL:0000133,9.15e-08,44;CL:0002319,3.16e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.41e-26!102;UBERON:0000924!6.41e-26!102;UBERON:0006601!6.41e-26!102;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0001017!2.77e-16!73;UBERON:0005743!2.77e-16!73;UBERON:0002346!8.29e-14!71;UBERON:0003075!8.29e-14!71;UBERON:0007284!8.29e-14!71;UBERON:0000033!7.45e-12!63;UBERON:0000468!4.91e-09!333;UBERON:0000010!6.32e-09!11;UBERON:0001049!1.21e-08!52;UBERON:0005068!1.21e-08!52;UBERON:0006241!1.21e-08!52;UBERON:0007135!1.21e-08!52;UBERON:0000955!8.20e-08!50;UBERON:0006238!8.20e-08!50;UBERON:0003056!1.13e-07!49;UBERON:0002410!1.26e-07!9;UBERON:0002616!2.00e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.02e-25,95;UBERON:0000924,9.02e-25,95;UBERON:0006601,9.02e-25,95;UBERON:0001016,1.52e-17,75;UBERON:0010371,2.03e-16,73;UBERON:0001017,3.05e-16,73;UBERON:0002346,1.96e-12,64;UBERON:0003075,1.96e-12,64;UBERON:0007284,1.96e-12,64;UBERON:0010314,1.33e-10,92;UBERON:0000010,1.99e-09,11;UBERON:0000073,3.07e-09,54;UBERON:0001049,2.09e-08,52;UBERON:0005068,2.09e-08,52;UBERON:0006241,2.09e-08,52;UBERON:0007135,2.09e-08,52;UBERON:0002410,4.85e-08,9;UBERON:0003056,3.32e-07,49|phase1_expression=67.1023669369087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0,0.515672092277442,2.42779753031517,1.5869729378161,4.43681982454325,0,1.77858959222228,0,0,0,53.328819672276,56.8643091875901,0.414758449233911,0.270011876663381,0.210324961351382,51.7028281770884,46.1615250588872,1.10241719293459,0.383381884072945,1.83843757322004,20.9220173898839,32.4325838736377,40.8593378461608,1.45074916503213,1.37231465403614,1.04182674111352,40.4815348552002,18.5711661310454,33.3100180153446,25.9273155216828,32.0336281797982,7.82877672466262,133.126647879738,158.473561543929,0,0,0.679971333707751,0,0,0,5.89866564553358,0,0,0,236.476101805047,0,0,0,0,0,0,2.62622923353838,0.258937883647172,1.63286352971307,9.36820764537134,6.69824052286711,7.14908041493781,7.988299949289,5.87943535678524,1.88499886994513,0,3.18118585223806,0,6.63244084784378,2.42925670306433,1.93950101254089,1.86391761218122,16.6885054296582,21.5730108017859,0.766371165625774,0,0,0,40.4434726393021,34.7700458142156,7.28795242254614,18.7730265807659,23.2701066170601,52.7781633181283,51.2682391294114,1.2220723662038,0.870848794270651,0.505445516867349,113.217718466923,3.77349284591841,2.98872735763515,3.78130472591233,5.87748789559289,7.21186891004075,7.43059577652129,8.24575176125614,39.0642089815914,0.862271971731369,1.89106080167819,4.92663147659057,5.04150184583422,3.05851974148158,4.87553033131033,6.37924622864625,1.59227413454795,0,0,0,1.44988040774851,1.87620847984877,1.08037236876609,0.946978942340841,0.196764231747404,0.462801338662135,0.465067889500816,1.07309360559848,0.583826711835847,1.15191894939436,1.47750717671186,2.35099547682982,2.33919979880532,1.09775057645525,2.14730270016595,27.7582732104648,4.11618449517138,0,0.793351699990633,10.2378360256912,14.1664369834868,8.50525244725816,7.46229041106367,8.2279876222602,5.70676878337677,2.84717436926707,1.97638745668813,2.5133520880027,3.78017296878187,4.48417400373976,2.69645822596266,1.29682829924817,1.59313018603494,0.379335801906163,1.48523066392647,0,0.203651327845314,0.193952487167626,0.771494018793504,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.333690211432188,0.786235980452812,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,2.27389694124582,0.651859905768103,1.01847051465113,0.938760993154008,0.335012514883631,0.714130922658041,0.975668239288994,1.57635144106191,1.32878813789265,1.11618338060241,1.3109065177259,1.89953480052485,0.433947175744535,0,0,111.630489975321,133.553385211491,66.6284948449337,89.6669402430354,0,3.28212205365685,153.968011075133,133.920489293747,198.404949311908,244.226111507508,274.265167795427,298.362663451429,193.499515400599,152.265301971793,182.227665633347,21.2072068838393,0.567760340833074,1.42452482933804,3.4206261464251,0.494910368917606,1.32745138339963,4.37005145078967,1.209294227859,2.64047111658257,5.90603785761546,7.68587869859819,5.16856586336442,2.18120237686503,2.49548164869305,2.5282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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20665 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q04888,uniprot:E9Q1M0 | |||
|association_with_transcript=0bp_to_ENSMUST00000040019,ENSMUST00000089349,NM_011437_5end | |||
|cluster_id=chr15:78994907..78994926,- | |||
|description=CAGE_peak_1_at_Sox10_5end | |||
|id=chr15:78994907..78994926,- | |||
|ontology_enrichment_celltype=CL:0000540!9.80e-09!33;CL:0000047!9.80e-09!33;CL:0000031!9.80e-09!33;CL:0000404!9.80e-09!33;CL:0000221!1.16e-07!44;CL:0000133!1.16e-07!44;CL:0000107!1.26e-07!9;CL:0002319!3.80e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-08,33;CL:0000047,1.91e-08,33;CL:0000031,1.91e-08,33;CL:0000404,1.91e-08,33;CL:0000107,4.85e-08,9;CL:0000221,9.15e-08,44;CL:0000133,9.15e-08,44;CL:0002319,3.16e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.41e-26!102;UBERON:0000924!6.41e-26!102;UBERON:0006601!6.41e-26!102;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0001017!2.77e-16!73;UBERON:0005743!2.77e-16!73;UBERON:0002346!8.29e-14!71;UBERON:0003075!8.29e-14!71;UBERON:0007284!8.29e-14!71;UBERON:0000033!7.45e-12!63;UBERON:0000468!4.91e-09!333;UBERON:0000010!6.32e-09!11;UBERON:0001049!1.21e-08!52;UBERON:0005068!1.21e-08!52;UBERON:0006241!1.21e-08!52;UBERON:0007135!1.21e-08!52;UBERON:0000955!8.20e-08!50;UBERON:0006238!8.20e-08!50;UBERON:0003056!1.13e-07!49;UBERON:0002410!1.26e-07!9;UBERON:0002616!2.00e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.02e-25,95;UBERON:0000924,9.02e-25,95;UBERON:0006601,9.02e-25,95;UBERON:0001016,1.52e-17,75;UBERON:0010371,2.03e-16,73;UBERON:0001017,3.05e-16,73;UBERON:0002346,1.96e-12,64;UBERON:0003075,1.96e-12,64;UBERON:0007284,1.96e-12,64;UBERON:0010314,1.33e-10,92;UBERON:0000010,1.99e-09,11;UBERON:0000073,3.07e-09,54;UBERON:0001049,2.09e-08,52;UBERON:0005068,2.09e-08,52;UBERON:0006241,2.09e-08,52;UBERON:0007135,2.09e-08,52;UBERON:0002410,4.85e-08,9;UBERON:0003056,3.32e-07,49 | |||
|phase1_expression=67.1023669369087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0,0.515672092277442,2.42779753031517,1.5869729378161,4.43681982454325,0,1.77858959222228,0,0,0,53.328819672276,56.8643091875901,0.414758449233911,0.270011876663381,0.210324961351382,51.7028281770884,46.1615250588872,1.10241719293459,0.383381884072945,1.83843757322004,20.9220173898839,32.4325838736377,40.8593378461608,1.45074916503213,1.37231465403614,1.04182674111352,40.4815348552002,18.5711661310454,33.3100180153446,25.9273155216828,32.0336281797982,7.82877672466262,133.126647879738,158.473561543929,0,0,0.679971333707751,0,0,0,5.89866564553358,0,0,0,236.476101805047,0,0,0,0,0,0,2.62622923353838,0.258937883647172,1.63286352971307,9.36820764537134,6.69824052286711,7.14908041493781,7.988299949289,5.87943535678524,1.88499886994513,0,3.18118585223806,0,6.63244084784378,2.42925670306433,1.93950101254089,1.86391761218122,16.6885054296582,21.5730108017859,0.766371165625774,0,0,0,40.4434726393021,34.7700458142156,7.28795242254614,18.7730265807659,23.2701066170601,52.7781633181283,51.2682391294114,1.2220723662038,0.870848794270651,0.505445516867349,113.217718466923,3.77349284591841,2.98872735763515,3.78130472591233,5.87748789559289,7.21186891004075,7.43059577652129,8.24575176125614,39.0642089815914,0.862271971731369,1.89106080167819,4.92663147659057,5.04150184583422,3.05851974148158,4.87553033131033,6.37924622864625,1.59227413454795,0,0,0,1.44988040774851,1.87620847984877,1.08037236876609,0.946978942340841,0.196764231747404,0.462801338662135,0.465067889500816,1.07309360559848,0.583826711835847,1.15191894939436,1.47750717671186,2.35099547682982,2.33919979880532,1.09775057645525,2.14730270016595,27.7582732104648,4.11618449517138,0,0.793351699990633,10.2378360256912,14.1664369834868,8.50525244725816,7.46229041106367,8.2279876222602,5.70676878337677,2.84717436926707,1.97638745668813,2.5133520880027,3.78017296878187,4.48417400373976,2.69645822596266,1.29682829924817,1.59313018603494,0.379335801906163,1.48523066392647,0,0.203651327845314,0.193952487167626,0.771494018793504,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.333690211432188,0.786235980452812,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,2.27389694124582,0.651859905768103,1.01847051465113,0.938760993154008,0.335012514883631,0.714130922658041,0.975668239288994,1.57635144106191,1.32878813789265,1.11618338060241,1.3109065177259,1.89953480052485,0.433947175744535,0,0,111.630489975321,133.553385211491,66.6284948449337,89.6669402430354,0,3.28212205365685,153.968011075133,133.920489293747,198.404949311908,244.226111507508,274.265167795427,298.362663451429,193.499515400599,152.265301971793,182.227665633347,21.2072068838393,0.567760340833074,1.42452482933804,3.4206261464251,0.494910368917606,1.32745138339963,4.37005145078967,1.209294227859,2.64047111658257,5.90603785761546,7.68587869859819,5.16856586336442,2.18120237686503,2.49548164869305,2.52829406348653,1.05418608574999,1.03135543248187,0.680879211507576,2.88097750450096,1.68166288917581,1.50035924522115,0.886701168211368,4.99432689285798,7.40470592709544,12.4830629136986,0.23467170806371,0,2.8668691747145,3.2977250588296,7.42736362801165,8.80568703951075,10.0272768962635,7.87876318776294,2.04036585640896,92.7126510052548,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,0.954670618015114,13.91878371757,9.35269548783504,5.50827238191186,5.43629569637619,5.02233896616208,4.45052343069908,7.93473174963225,1.57053565190418,1.94422459937689,53.4351809254756,0.56369293868419,7.32631075615496,3.47462829959905,2.91676782516071,1.16243841129958,1.01373675294467,0.469428954583016,0.2604087696879,2.30690557736564,0.966336483304024,1.15212002503146,0,2.63542779877213,1.95150818613172,0.25984164595559,0.716106782669926,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.762068066549998,0,0,0.0962118416403295,0.233753804363138,8.84248496099324,0,0,0,5.79568782096571,0.187682475451182,0,2.78678892802786,0,22.0253218620656,13.8097570952153,20.0513429703789,9.6237782112465,10.2762377965596,18.8848474347425,18.9006300064906,13.9599572999508,11.7817026335893,9.83744592328458,7.05753963572401,5.1873233542134,4.26834014385335,5.83456120963906,2.93458427679175,5.51530525350042,5.778414922842,5.97501665992793,4.49286893428541,5.81203587056734,6.08350319736575,4.71565853465191,6.74218853783153,6.91471645972588,6.83482080571798,6.66811167796303,6.02598494913249,8.87382414133043,5.76920261124629,5.5935589651071,5.48590803816665,5.85670160325814,4.5302876089991,4.65108533223451,5.64656282491984,5.33072029717562,6.21955107767427,4.99832451731901,6.24698923690964,9.53941861818155,5.69448086996036,6.59980031916275,2.86461730218783,5.57772628269478,6.75173138433995,11.2414760072076,6.31615342802603,7.30561583764214,9.946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| |||
|short_description=p1@Sox10 | |||
}} |
Revision as of 15:11, 5 August 2015
Short description: | p1@Sox10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sox10_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000040019, ENSMUST00000089349, NM_011437_5end |
EntrezGene: | 20665 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.91e-08 | 33 |
neuronal stem cell | 1.91e-08 | 33 |
neuroblast | 1.91e-08 | 33 |
electrically signaling cell | 1.91e-08 | 33 |
autonomic neuron | 4.85e-08 | 9 |
ectodermal cell | 9.15e-08 | 44 |
neurectodermal cell | 9.15e-08 | 44 |
neural cell | 3.16e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.02e-25 | 95 |
ectoderm | 9.02e-25 | 95 |
presumptive ectoderm | 9.02e-25 | 95 |
nervous system | 1.52e-17 | 75 |
ecto-epithelium | 2.03e-16 | 73 |
central nervous system | 3.05e-16 | 73 |
neurectoderm | 1.96e-12 | 64 |
neural plate | 1.96e-12 | 64 |
presumptive neural plate | 1.96e-12 | 64 |
structure with developmental contribution from neural crest | 1.33e-10 | 92 |
peripheral nervous system | 1.99e-09 | 11 |
regional part of nervous system | 3.07e-09 | 54 |
neural tube | 2.09e-08 | 52 |
neural rod | 2.09e-08 | 52 |
future spinal cord | 2.09e-08 | 52 |
neural keel | 2.09e-08 | 52 |
autonomic nervous system | 4.85e-08 | 9 |
pre-chordal neural plate | 3.32e-07 | 49 |