FFCP PHASE1:Mm9::chr4:59594569..59594586,+: Difference between revisions
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{{FFCP|EntrezGene=72479|HGNC=|MCL_coexpression_id=201|UniProt=B1AX78|association_with_transcript=52bp_to_ENSMUST00000107528_5end|description=CAGE_peak_1_at_Hsdl2_5end|id=chr4:59594569..59594586,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!6.20e-09!47;UBERON:0002365!4.49e-08!25;UBERON:0002330!4.49e-08!25;UBERON:0009854!2.98e-07!23;UBERON:0009856!2.98e-07!23;UBERON:0002107!8.27e-07!22;UBERON:0007499!8.27e-07!22;UBERON:0006925!8.27e-07!22;UBERON:0009497!8.27e-07!22;UBERON:0000015!8.27e-07!22;UBERON:0002423!8.27e-07!22;UBERON:0006235!8.27e-07!22;UBERON:0008835!8.27e-07!22;UBERON:0003894!8.27e-07!22;UBERON:0004161!8.27e-07!22;UBERON:0008836!8.27e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.20e-09,47;UBERON:0002365,4.49e-08,25;UBERON:0002330,4.49e-08,25;UBERON:0009854,2.98e-07,23;UBERON:0009856,2.98e-07,23;UBERON:0002107,8.27e-07,22;UBERON:0007499,8.27e-07,22;UBERON:0006925,8.27e-07,22;UBERON:0009497,8.27e-07,22;UBERON:0000015,8.27e-07,22;UBERON:0002423,8.27e-07,22;UBERON:0006235,8.27e-07,22;UBERON:0008835,8.27e-07,22;UBERON:0003894,8.27e-07,22;UBERON:0004161,8.27e-07,22;UBERON:0008836,8.27e-07,22|phase1_expression=12.4916100741739,60.0237701139701,46.8649216571222,84.0850507432988,84.6513783609327,31.7291823913472,26.3982283872944,26.5994046289647,22.80777298857,21.0658073689794,4.96532107853964,2.31339261086476,20.2016861318823,17.4840804837995,15.3230490435205,20.4500020063724,14.6907994406911,15.2999150198745,18.6475629703805,11.4585205985468,16.4133549991565,29.1915396530603,38.9187685817014,40.4780829667319,23.1703373877842,51.6808767703518,34.8917216888851,47.4036711908956,65.7481031319054,40.3248207615889,20.8426680015986,14.6057054895715,4.92051830067656,0,22.2415747208481,10.6390173029435,10.8209758819056,17.996860121687,7.0320181007142,20.4174260149781,18.8234076169925,23.2235464885872,20.3914348273085,12.4637849795822,11.6583470902442,10.4621648732158,5.47673941043627,9.81113203712009,9.00713349211335,18.0819806139084,12.3188051030319,10.062679505548,17.9527388481778,41.3456420946466,58.1442272516463,9.26133969729409,16.3324060765091,20.6268836910977,4.45096213891115,4.23192783417626,5.07065122804943,4.06613438482959,13.3394219416671,2.6996991518442,0.988866362566974,1.4209602298922,6.2916023208865,7.30014780110954,1.8664130215526,1.08004750665353,1.89292465216244,21.7094748146891,37.7685205027259,2.69479758272899,2.68367318851062,4.5960939330501,40.7428759697738,22.472971502993,29.4924543851987,2.76961204233407,3.11057988248193,3.12548022334056,27.3599339021353,25.3243174514256,20.933359945423,39.7748590389451,45.8436812173111,9.31997229126503,8.25415507331706,22.4447533517153,18.5513272769074,75.717301174362,21.0791113449403,118.194998968682,150.098352430412,146.952818967926,82.0195413569431,11.759692257886,12.4697282209377,6.71345191569646,20.9856695467254,15.3991772897181,15.2883143823987,0,7.79367747640371,7.34743609877786,7.58286667522175,130.626358398605,24.5990989464813,55.3689178711796,11.450031566565,25.879565656532,19.3717017695089,23.0605640045513,24.8112172056337,54.6649672284088,9.88779870937496,340.965283617152,15.0383793831479,32.029836289587,33.126227769059,21.3345111379498,72.6927868750676,21.0802173848314,13.823482649688,30.3993895698224,8.98613433794402,8.99854096490112,10.5468288470644,27.861058929297,14.1825186873774,5.02617408451458,15.4703644971126,11.5071955798649,19.9476522777178,17.5220564113178,6.41587992256993,30.4797077994728,23.2504937758981,73.2337658484929,7.41686524887411,8.27647575960503,8.64298223065676,9.79581315932148,7.48401490664606,9.73664274164858,9.27647073141315,46.8253101037618,4.31135985865684,5.29497024469894,7.9178005873777,5.91828477554452,10.0097009721215,30.2979384874285,39.921734463141,8.7575077400137,22.4708219940235,27.0215302470451,13.924011470384,16.1558102577691,18.0585066185444,18.1862682075625,29.5930919481513,43.0913667526814,50.4453459141727,76.0385999333834,67.3366237513044,117.232403736638,219.193720084756,268.5779712334,247.908419591227,253.364578208101,227.673469556819,219.159081835687,16.8231958851302,6.07137213037778,53.8582616263591,84.0952801990071,4.26576501070468,7.19933682767359,6.44337306610467,8.67239155880373,11.3412802360884,14.2669219584419,29.4208018157597,26.3518327558417,24.8821856712267,31.4351225825018,28.8546848936298,28.7622210769351,31.3400172318307,45.005927755487,6.06937283049861,8.45438993311993,7.88954149711563,15.4775009162439,14.1585315632367,18.936671370386,41.546404890637,60.3725505236573,55.1065534723226,92.6712701052722,213.445891502747,12.6802280344231,13.562570662811,18.8884174403277,20.4888722602388,23.8765388154893,40.2308845814643,46.6067742670313,89.1743747262695,97.743863094957,92.0116521775069,122.434371782938,88.6186991645352,117.19659936746,142.082751509354,134.601742460379,20.3228509183265,7.39016505904891,8.8001087278694,6.28056817368196,7.27539769694356,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72479 | |||
|HGNC= | |||
|MCL_coexpression_id=201 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AX78 | |||
|association_with_transcript=52bp_to_ENSMUST00000107528_5end | |||
|cluster_id=chr4:59594569..59594586,+ | |||
|description=CAGE_peak_1_at_Hsdl2_5end | |||
|id=chr4:59594569..59594586,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.20e-09!47;UBERON:0002365!4.49e-08!25;UBERON:0002330!4.49e-08!25;UBERON:0009854!2.98e-07!23;UBERON:0009856!2.98e-07!23;UBERON:0002107!8.27e-07!22;UBERON:0007499!8.27e-07!22;UBERON:0006925!8.27e-07!22;UBERON:0009497!8.27e-07!22;UBERON:0000015!8.27e-07!22;UBERON:0002423!8.27e-07!22;UBERON:0006235!8.27e-07!22;UBERON:0008835!8.27e-07!22;UBERON:0003894!8.27e-07!22;UBERON:0004161!8.27e-07!22;UBERON:0008836!8.27e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.20e-09,47;UBERON:0002365,4.49e-08,25;UBERON:0002330,4.49e-08,25;UBERON:0009854,2.98e-07,23;UBERON:0009856,2.98e-07,23;UBERON:0002107,8.27e-07,22;UBERON:0007499,8.27e-07,22;UBERON:0006925,8.27e-07,22;UBERON:0009497,8.27e-07,22;UBERON:0000015,8.27e-07,22;UBERON:0002423,8.27e-07,22;UBERON:0006235,8.27e-07,22;UBERON:0008835,8.27e-07,22;UBERON:0003894,8.27e-07,22;UBERON:0004161,8.27e-07,22;UBERON:0008836,8.27e-07,22 | |||
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| |||
|short_description=p1@Hsdl2 | |||
}} |
Revision as of 15:45, 5 August 2015
Short description: | p1@Hsdl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsdl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:201 |
Association with transcript: | 52bp_to_ENSMUST00000107528_5end |
EntrezGene: | 72479 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.20e-09 | 47 |
exocrine gland | 4.49e-08 | 25 |
exocrine system | 4.49e-08 | 25 |
digestive tract diverticulum | 2.98e-07 | 23 |
sac | 2.98e-07 | 23 |
liver | 8.27e-07 | 22 |
epithelial sac | 8.27e-07 | 22 |
digestive gland | 8.27e-07 | 22 |
epithelium of foregut-midgut junction | 8.27e-07 | 22 |
anatomical boundary | 8.27e-07 | 22 |
hepatobiliary system | 8.27e-07 | 22 |
foregut-midgut junction | 8.27e-07 | 22 |
hepatic diverticulum | 8.27e-07 | 22 |
liver primordium | 8.27e-07 | 22 |
septum transversum | 8.27e-07 | 22 |
liver bud | 8.27e-07 | 22 |