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FFCP PHASE1:Mm9::chr2:92755237..92755272,+: Difference between revisions

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{{FFCP|EntrezGene=80976|HGNC=|MCL_coexpression_id=1785|UniProt=Q9EQT6,A2AGX5|association_with_transcript=0bp_to_ENSMUST00000028648,NM_030725,uc008lfn.1_5end|description=CAGE_peak_1_at_Syt13_5end|id=chr2:92755237..92755272,+|ontology_enrichment_celltype=CL:0000117!8.40e-09!23;CL:0000337!8.40e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-09,23;CL:0000337,3.30e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.24e-19!52;UBERON:0005068!7.24e-19!52;UBERON:0006241!7.24e-19!52;UBERON:0007135!7.24e-19!52;UBERON:0000033!1.64e-18!63;UBERON:0000955!5.85e-18!50;UBERON:0006238!5.85e-18!50;UBERON:0002616!1.82e-17!49;UBERON:0007811!1.84e-17!86;UBERON:0000153!7.40e-17!94;UBERON:0002346!1.71e-16!71;UBERON:0003075!1.71e-16!71;UBERON:0007284!1.71e-16!71;UBERON:0003056!4.66e-16!49;UBERON:0001017!5.91e-16!73;UBERON:0005743!5.91e-16!73;UBERON:0000073!6.37e-15!75;UBERON:0001016!6.37e-15!75;UBERON:0003080!2.69e-14!40;UBERON:0002780!9.41e-14!39;UBERON:0001890!9.41e-14!39;UBERON:0006240!9.41e-14!39;UBERON:0002020!4.53e-13!34;UBERON:0004121!2.73e-12!102;UBERON:0000924!2.73e-12!102;UBERON:0006601!2.73e-12!102;UBERON:0002791!2.01e-10!29;UBERON:0003528!2.01e-10!29;UBERON:0001893!2.01e-10!29;UBERON:0000468!1.05e-08!333;UBERON:0002021!5.61e-08!10;UBERON:0000411!5.61e-08!10;UBERON:0001950!5.61e-08!10;UBERON:0000922!8.26e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-21,54;UBERON:0001049,1.65e-19,52;UBERON:0005068,1.65e-19,52;UBERON:0006241,1.65e-19,52;UBERON:0007135,1.65e-19,52;UBERON:0002346,1.67e-19,64;UBERON:0003075,1.67e-19,64;UBERON:0007284,1.67e-19,64;UBERON:0003056,7.17e-17,49;UBERON:0010371,1.03e-16,73;UBERON:0000955,1.60e-16,47;UBERON:0006238,1.60e-16,47;UBERON:0002616,5.11e-16,46;UBERON:0001017,1.71e-15,73;UBERON:0003080,5.21e-15,40;UBERON:0002780,1.95e-14,39;UBERON:0001890,1.95e-14,39;UBERON:0006240,1.95e-14,39;UBERON:0001016,2.84e-14,75;UBERON:0002020,1.02e-13,34;UBERON:0004121,5.46e-13,95;UBERON:0000924,5.46e-13,95;UBERON:0006601,5.46e-13,95;UBERON:0003528,6.40e-11,29;UBERON:0002791,6.40e-11,29;UBERON:0001893,6.40e-11,29;UBERON:0002021,2.44e-08,10;UBERON:0000411,2.44e-08,10;UBERON:0001950,2.44e-08,10;UBERON:0010314,5.61e-08,92;UBERON:0002619,5.27e-07,17|phase1_expression=17.135926640213,0,0,0.30246421130683,0,5.20425742926858,4.43864017131499,0,0.703943610758334,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,17.093701320365,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,2.52030129759931,1.10865255327652,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,3.9028013572429,4.8660926985367,4.22157529971868,0.782391344348039,1.74420125104357,1.97717564461025,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0,6.87680255853016,0,42.0818238587963,44.4352422588508,45.6358610524449,2.03306719241479,0,15.7482450524245,8.89979726310277,9.9467216092454,1.49800055259202,0.768436610643109,1.24427534770173,2.29510095163874,1.26194976810829,73.4123029917775,67.1440364492905,3.30725157880376,1.53352753629178,5.51531271966013,121.127469099328,118.366162404969,114.436867275901,180.288555327175,166.69048664359,140.646610050325,100.505879640497,102.422795025766,89.9981679405412,79.844346663364,72.4671855267434,37.0934897192348,0.227178579999552,0.377857800533928,0,0,0,0,0,0,3.7919993435573,0.170430322578058,0,0,8.02807492727079,1.28326477414318,5.09610479413291,0,0.216491041011214,0.506719730950197,0.505524445014783,4.33898742932428,4.14300613835475,0.890652834388949,1.04091196059682,2.13125834818499,1.38369298353635,0.452167921657868,1.29347577849275,0.753999547978053,1.23597483867187,0,0,2.75003644910596,0.441683036920787,0,7.45567044872489,54.1644474471362,71.4213270233882,2.29911349687732,0,0,0,68.454322208004,39.8025524452205,14.5759048450923,109.683146041326,115.583386713309,100.984989655946,75.9289111157106,7.84163101647435,0.746441823660558,0.252722758433675,7.57590681191306,2.86264974517948,21.1509936078795,22.3277040958633,15.5225962370787,8.09634339900802,6.91814089538189,6.1843138209421,13.4525752784288,2.15567992932842,2.64748512234947,2.63926686245923,4.82230611340665,2.50242524303038,2.089512999133,2.88094990971121,5.17489093728082,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,84.5365593227792,8.43817821510132,0.991256348951394,1.58670339998127,2.13288250535234,2.09013004674395,3.09281907173024,4.03367049246685,4.66993892074228,4.75564065281398,4.2707615539006,3.12928013975621,1.50801125280162,3.58121649674071,6.43381487493096,4.49409704327111,2.80979464837102,4.97853183135918,1.89667900953082,2.74196430263349,0,3.05476991767971,4.07300223052014,3.85747009396752,7.20896523216533,1.47610147979602,1.56998727841375,2.09775178667061,0,0.83422552858047,0.196558995113203,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:80976
|HGNC=
|MCL_coexpression_id=1785
|TSSclassifier=NA
|UniProt=uniprot:Q9EQT6,uniprot:A2AGX5
|association_with_transcript=0bp_to_ENSMUST00000028648,NM_030725,uc008lfn.1_5end
|cluster_id=chr2:92755237..92755272,+
|description=CAGE_peak_1_at_Syt13_5end
|id=chr2:92755237..92755272,+
|ontology_enrichment_celltype=CL:0000117!8.40e-09!23;CL:0000337!8.40e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-09,23;CL:0000337,3.30e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.24e-19!52;UBERON:0005068!7.24e-19!52;UBERON:0006241!7.24e-19!52;UBERON:0007135!7.24e-19!52;UBERON:0000033!1.64e-18!63;UBERON:0000955!5.85e-18!50;UBERON:0006238!5.85e-18!50;UBERON:0002616!1.82e-17!49;UBERON:0007811!1.84e-17!86;UBERON:0000153!7.40e-17!94;UBERON:0002346!1.71e-16!71;UBERON:0003075!1.71e-16!71;UBERON:0007284!1.71e-16!71;UBERON:0003056!4.66e-16!49;UBERON:0001017!5.91e-16!73;UBERON:0005743!5.91e-16!73;UBERON:0000073!6.37e-15!75;UBERON:0001016!6.37e-15!75;UBERON:0003080!2.69e-14!40;UBERON:0002780!9.41e-14!39;UBERON:0001890!9.41e-14!39;UBERON:0006240!9.41e-14!39;UBERON:0002020!4.53e-13!34;UBERON:0004121!2.73e-12!102;UBERON:0000924!2.73e-12!102;UBERON:0006601!2.73e-12!102;UBERON:0002791!2.01e-10!29;UBERON:0003528!2.01e-10!29;UBERON:0001893!2.01e-10!29;UBERON:0000468!1.05e-08!333;UBERON:0002021!5.61e-08!10;UBERON:0000411!5.61e-08!10;UBERON:0001950!5.61e-08!10;UBERON:0000922!8.26e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-21,54;UBERON:0001049,1.65e-19,52;UBERON:0005068,1.65e-19,52;UBERON:0006241,1.65e-19,52;UBERON:0007135,1.65e-19,52;UBERON:0002346,1.67e-19,64;UBERON:0003075,1.67e-19,64;UBERON:0007284,1.67e-19,64;UBERON:0003056,7.17e-17,49;UBERON:0010371,1.03e-16,73;UBERON:0000955,1.60e-16,47;UBERON:0006238,1.60e-16,47;UBERON:0002616,5.11e-16,46;UBERON:0001017,1.71e-15,73;UBERON:0003080,5.21e-15,40;UBERON:0002780,1.95e-14,39;UBERON:0001890,1.95e-14,39;UBERON:0006240,1.95e-14,39;UBERON:0001016,2.84e-14,75;UBERON:0002020,1.02e-13,34;UBERON:0004121,5.46e-13,95;UBERON:0000924,5.46e-13,95;UBERON:0006601,5.46e-13,95;UBERON:0003528,6.40e-11,29;UBERON:0002791,6.40e-11,29;UBERON:0001893,6.40e-11,29;UBERON:0002021,2.44e-08,10;UBERON:0000411,2.44e-08,10;UBERON:0001950,2.44e-08,10;UBERON:0010314,5.61e-08,92;UBERON:0002619,5.27e-07,17
|phase1_expression=17.135926640213,0,0,0.30246421130683,0,5.20425742926858,4.43864017131499,0,0.703943610758334,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,17.093701320365,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,2.52030129759931,1.10865255327652,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,3.9028013572429,4.8660926985367,4.22157529971868,0.782391344348039,1.74420125104357,1.97717564461025,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0,6.87680255853016,0,42.0818238587963,44.4352422588508,45.6358610524449,2.03306719241479,0,15.7482450524245,8.89979726310277,9.9467216092454,1.49800055259202,0.768436610643109,1.24427534770173,2.29510095163874,1.26194976810829,73.4123029917775,67.1440364492905,3.30725157880376,1.53352753629178,5.51531271966013,121.127469099328,118.366162404969,114.436867275901,180.288555327175,166.69048664359,140.646610050325,100.505879640497,102.422795025766,89.9981679405412,79.844346663364,72.4671855267434,37.0934897192348,0.227178579999552,0.377857800533928,0,0,0,0,0,0,3.7919993435573,0.170430322578058,0,0,8.02807492727079,1.28326477414318,5.09610479413291,0,0.216491041011214,0.506719730950197,0.505524445014783,4.33898742932428,4.14300613835475,0.890652834388949,1.04091196059682,2.13125834818499,1.38369298353635,0.452167921657868,1.29347577849275,0.753999547978053,1.23597483867187,0,0,2.75003644910596,0.441683036920787,0,7.45567044872489,54.1644474471362,71.4213270233882,2.29911349687732,0,0,0,68.454322208004,39.8025524452205,14.5759048450923,109.683146041326,115.583386713309,100.984989655946,75.9289111157106,7.84163101647435,0.746441823660558,0.252722758433675,7.57590681191306,2.86264974517948,21.1509936078795,22.3277040958633,15.5225962370787,8.09634339900802,6.91814089538189,6.1843138209421,13.4525752784288,2.15567992932842,2.64748512234947,2.63926686245923,4.82230611340665,2.50242524303038,2.089512999133,2.88094990971121,5.17489093728082,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,84.5365593227792,8.43817821510132,0.991256348951394,1.58670339998127,2.13288250535234,2.09013004674395,3.09281907173024,4.03367049246685,4.66993892074228,4.75564065281398,4.2707615539006,3.12928013975621,1.50801125280162,3.58121649674071,6.43381487493096,4.49409704327111,2.80979464837102,4.97853183135918,1.89667900953082,2.74196430263349,0,3.05476991767971,4.07300223052014,3.85747009396752,7.20896523216533,1.47610147979602,1.56998727841375,2.09775178667061,0,0.83422552858047,0.196558995113203,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.947457058852424,1.46668478797823,2.20668611507745,1.40814148973101,0.837531287209079,0.476087281772027,0.390267295715598,0.630540576424764,0.221464689648775,0.956728611944923,0,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,43.0275581167282,52.2764122201226,0,0.504941854408746,0.315508219416257,0.390438744296638,1.50796378412959,0,0.891194696329576,0,0,0.876767573733936,0.790575555893047,28.5975971615408,1.27746076687442,11.7523298420388,11.2392001953967,5.1140738121486,7.96470830039777,20.8791347093284,23.8835610002153,19.8035333743693,31.3020006453619,23.6725063916824,28.9439688348408,23.9932261455154,25.3113138653152,7.9009189483954,7.37930260024991,6.18813259489121,42.5549507192235,3.78128297465751,5.17434735131018,10.9311887866112,19.1527452333655,21.0475204770443,24.0241570079097,24.9661258273971,3.75474732901937,10.1679394014634,0.441056796109924,2.30840754118072,3.55221738730992,1.86970067277283,0.954978752025092,0.656563598980245,2.33184669303881,31.5223013417866,0,2.68302928352189,0.925972636848558,0.188368457004691,0.683471138605126,0.228778173206523,0.169978429993855,0,0.552799895217695,1.90934123603023,1.10717597753397,8.3360981522008,7.66837919834789,6.27264888043406,3.71216358368502,4.5853877770839,7.19085064810423,4.4498510137285,8.03612834409116,0,0,4.18646328923141,11.0857188606255,17.5006069509643,13.949260935595,15.3750074196608,11.7357238645754,11.1975770965797,4.19437377702843,0.724752362478018,0,25.5969007708824,1.62180172232131,0.821687657318618,7.9251702016455,16.1124026100733,20.0668168329078,15.9859947861559,16.3935375163781,16.4575313415481,21.79514670333,23.0891963963365,26.3136277997332,24.3415959350034,34.0111785348366,0,2.21985953374065,0.0897138566094757,4.19711540910196,0,1.12609485270709,2.93042598827624,0.643105137237198,1.50471631210609,110.691361152945,122.906838147416,112.860416147561,131.295831310577,141.126999072752,119.352235787573,119.47898254103,122.487367276988,135.036437877293,138.759763549488,3.73634451303036,8.77854721482268,12.4635532200518,8.99494853152688,7.96530017986333,8.27295788025063,6.22290837844523,7.2112270033613,5.13470735346904,6.57012750585873,7.85785829659743,6.97917463128482,7.21039607518095,6.97874161213075,5.45636955078326,6.19181798667996,7.18482820858104,7.13764115715709,6.1812885120496,6.62395140604788,7.88599280486455,6.92155644021416,8.58370283810355,8.1393993314104,7.62285981364178,7.95377314181759,7.68297486065645,6.31367307450823,8.41985505844343,5.05028044491965,7.47400614182297,8.37288100192289,6.95692773388472,7.12709469455443,6.94463799532109,19.2354145012218,6.78401664491684,5.58664740525576,3.25190164517034,2.64709702943419,2.31867835620421
|short_description=p1@Syt13
}}

Revision as of 16:18, 5 August 2015

Short description:p1@Syt13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Syt13_5end
Coexpression cluster:MCL_coexpression_mm9:1785
Association with transcript: 0bp_to_ENSMUST00000028648, NM_030725, uc008lfn.1_5end
EntrezGene:80976
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Syt13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C342.08
Mouse Granule cells, donor2.CNhs12357.11731-123E344.44
Mouse Granule cells, donor3.CNhs12108.11636-122C745.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F173.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D567.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3121.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3118.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7114.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4180.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4166.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8140.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4100.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5102.42
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I690.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D679.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F672.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B254.16
cerebellum, neonate N30.CNhs11135.1395-42I271.42
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A468.45
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F114.58
cortex, adult.CNhs10473.12-14D5109.68
cortex, neonate N30.CNhs11107.1392-42F2115.58
diencephalon, adult.CNhs10482.20-12F2100.98
diencephalon, neonate N30.CNhs11201.1388-42B275.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E221.15
eyeball, embryo E15.CNhs10593.426-16C922.33
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C68.10
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G86.18
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E884.54
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D57.21
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C243.03
medulla oblongata, neonate N30.CNhs11200.1396-42A352.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H711.75
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F420.88
pancreas, embryo E15.CNhs11042.1556-45F223.88
pancreas, embryo E16.CNhs11003.460-26E519.80
pancreas, embryo E17.CNhs10599.1558-45G331.30
pancreas, embryo E18.CNhs10580.1535-43I723.67
pancreas, neonate N00.CNhs11105.645-26G928.94
pancreas, neonate N01.CNhs11138.1531-43D723.99
pancreas, neonate N02.CNhs11139.1539-43D825.31
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G842.55
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B919.15
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F524.02
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C931.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G517.50
testis, embryo E17.CNhs11029.486-18I513.95
testis, embryo E18.CNhs11027.503-18G515.38
testis, neonate N00.CNhs11189.1300-22B711.74
testis, neonate N07.CNhs11222.726-26I411.20
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B525.60
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C57.93
thymus, embryo E17.CNhs10581.478-18C116.11
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F815.99
thymus, neonate N03.CNhs11137.2104-43C716.39
thymus, neonate N06.CNhs11197.681-26C416.46
thymus, neonate N07.CNhs11211.713-19D321.80
thymus, neonate N10.CNhs11194.748-24E423.09
thymus, neonate N20.CNhs11186.820-7A226.31
thymus, neonate N25.CNhs11125.1362-25G724.34
thymus, neonate N30.CNhs11132.1393-42G234.01
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1110.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2122.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3112.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7131.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4141.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5119.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6119.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7122.49
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8135.04
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9138.76
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.30e-0923
neuroblast (sensu Vertebrata)3.30e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.57e-2154
neural tube1.65e-1952
neural rod1.65e-1952
future spinal cord1.65e-1952
neural keel1.65e-1952
neurectoderm1.67e-1964
neural plate1.67e-1964
presumptive neural plate1.67e-1964
pre-chordal neural plate7.17e-1749
ecto-epithelium1.03e-1673
brain1.60e-1647
future brain1.60e-1647
regional part of brain5.11e-1646
central nervous system1.71e-1573
anterior neural tube5.21e-1540
regional part of forebrain1.95e-1439
forebrain1.95e-1439
future forebrain1.95e-1439
nervous system2.84e-1475
gray matter1.02e-1334
ectoderm-derived structure5.46e-1395
ectoderm5.46e-1395
presumptive ectoderm5.46e-1395
brain grey matter6.40e-1129
regional part of telencephalon6.40e-1129
telencephalon6.40e-1129
occipital lobe2.44e-0810
visual cortex2.44e-0810
neocortex2.44e-0810
structure with developmental contribution from neural crest5.61e-0892
regional part of cerebral cortex5.27e-0717
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