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FFCP PHASE1:Mm9::chr1:45368469..45368483,+: Difference between revisions

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{{FFCP|EntrezGene=12825|HGNC=|MCL_coexpression_id=475|UniProt=P08121,Q3TVI5,Q9CSB7|association_with_transcript=86bp_to_ENSMUST00000087883,ENSMUST00000129611,NM_009930,uc007awp.2,uc007awq.2_5end|description=CAGE_peak_1_at_Col3a1_5end|id=chr1:45368469..45368483,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.40e-08!333|ontology_enrichment_uberon_v019_2=|phase1_expression=859.839160105639,19.5426228278042,14.1049764210756,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.6648780945253,2.83465374345756,0.699561878128147,0.157731082679119,0,0,287.106147550012,2.58156473122302,1.30599894569468,1.91990907352088,0.91763712426868,9.76194338995534,6.8921919385452,3.878482188346,4.18051522804023,3.52842181663903,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,1507.48849843956,1399.20440469174,169.413652245232,1307.37593640557,1.09012578190223,14.4992880604751,20.4151394027998,453.556006066175,102.06432069913,0,0,0,1235.35981184462,3606.88294194907,2077.64285978581,10.7227724255587,11.6378015439847,73.5244428067168,2297.70477196078,2265.03384569507,104.838317063283,86.0313735433268,70.3375313796639,922.16914017565,212.088504537498,52.4669438280897,48.3321259227453,53.6328651446024,171.96189261109,477.296916996437,2.08234358665422,3.73797336971122,11.0306254393203,7.70811166995721,5.61824287574826,2.30409799884365,8.44072241473241,25.6165402086747,48.4449434617787,10.6089539620525,16.8828783009504,18.0301932376636,334.108815927139,364.756246207302,125.260427594602,68.4564787731984,69.8281215386698,137.975496621999,188.432829058924,2.03991400112325,3.77792234146472,12.9955283489534,5.37632264516803,281.871951204426,268.598188383019,269.657872777778,282.318320033762,328.587698338996,483.790819851978,129.950672250389,49.7746692207332,0.216491041011214,0,0,51.9536652721723,72.5026074212081,28.3524485613815,772.009704109305,836.975599880076,831.830098602603,576.363377473229,889.793746895878,379.38743922429,383.399394956014,220.080221232106,125.614698376882,2472.28276774625,1076.60240249442,939.68824057606,309.410323622083,2.92780797011547,9.21565509979202,123.38575766575,0,0,0,2.39665023047716,1.83000241127451,3.26701315493447,2.43354048269187,7.16003280524926,2.0778804455956,7.78758062725237,4467.89657084108,1435.65644084047,59.1371254734799,67.9727194513311,147.296341433781,458.884600449212,621.574472088065,1338.56019201682,1155.39582858785,1029.00940132791,1072.22883413698,588.032761689783,73.9398215759649,347.009657107948,482.809884705876,1072.52471876812,1307.93426035721,2442.64069598648,3341.69611312859,828.977721299024,0,0,0,174.399900474893,359.997502070983,541.626680874733,571.975281173868,654.634599023613,893.515117843695,743.643555311804,1000.39151381918,825.88126656299,1410.93615315818,1776.62029626397,1199.1698308023,1003.80911366233,1050.54730166768,633.991122223996,1.26173969138476,43.9402694859545,9.91256348951394,122.705062931885,538.979409102536,839.767805447346,1010.06316184257,658.90007494446,710.94260617205,664.458112011169,791.514474656245,717.099248868343,1087.77878368757,1072.3753843018,1282.47376506957,833.205591822463,728.38522807772,519.161299374135,258.896684800957,522.22995113907,442.941401195206,568.390856016272,545.200441428196,615.441819537545,659.051189909009,169.899280324522,208.808308029028,154.616646394016,32.0168837254121,130.306027564269,147.026128344676,96.4658462131023,97.5757183878699,115.76503668116,160.668912474076,122.558554554045,135.707184810705,151.008777253445,280.348002728341,384.049457993895,587.566938474718,341.991800740389,242.365905668103,177.056772340356,128.95772673629,538.724083663488,616.333540903742,875.035917171095,692.336232451081,574.546463025428,701.990696972854,736.629520663191,1175.01236416755,1376.18158147749,1858.76423824033,923.533641737899,1145.59216969835,713.698455041178,0,0,574.380670886234,762.137293293671,6.90367536947505,17.2301179290539,313.443615560203,2069.25171936704,92.128400069547,96.0479310969731,52.3478856490701,102.99555191755,76.1971465361788,47.8399337033127,102.417107523748,93.8141303895311,71.5470878083208,1.92792789853084,418.581311279184,2742.56642768307,2822.17945776006,947.588386354244,102.213756521771,827.153627380022,834.110693665748,726.318162139964,1096.45592826631,1203.60860420048,1211.51183837262,1539.56534433724,1830.25754062716,1105.81261601742,733.713515681991,737.419134224536,10.8940673841212,305.563676571133,447.710404572113,598.643338843237,618.030714243323,978.352964547357,896.298515219753,770.905251158165,147.608504372074,257.799630241269,75.420712134797,2061.0781617685,4860.88656568024,3154.30566081762,3509.42754134821,2496.58308512238,904.173555225797,6.67531087237835,24.4345359540929,1064.13069121838,500.7660020077,178.384928783442,87.3476115137351,133.377674979403,0,0,0.138199973804424,181.387417422872,339.428521112558,1104.8379843673,1419.29818373929,1664.13374797916,1577.23279793864,1819.32003273123,2364.79802175759,1563.20648552862,1056.88049222128,87.6088431452565,5.6369293868419,437.485413724682,715.938888207861,1267.62729681485,1494.76663710778,1228.98685681992,1419.90523037498,1756.06653839036,645.618983629102,294.974211528553,395.753228598307,20.8567339614598,937.8068459323,700.796860735616,300.636784370618,300.764848721369,225.105974967173,200.005228001228,172.796746794255,200.01453734728,128.408469213675,85.3997788109039,49.0213140120955,47.3362260870421,40.9069157635491,165.73991042272,0,0.269141569828427,0.503653849092235,747.643728904577,3151.3764453008,1093.59834849984,738.713434306461,48.6524940914302,3.3885110557024,6.44455331110048,5.72895513439397,10.3111909406213,3.42541259885321,0.755393897389701,1.35004500046361,0,0,0.51776031175182,67.565563277299,197.916337206911,564.103833411659,1228.41824134609,290.314230239755,623.781024170898,1370.81781708036,1404.74702025478,1240.35274507237,1394.88860893616,1311.75537693199,1338.4925184756,1463.05491270944,1360.40643829866,1358.23396986234,1380.29911733835,1333.5968229734,1377.17892489039,1555.21218963168,1465.95404561846,1675.60203640753,1525.04960232719,1485.45746337181,1447.50496324136,1432.1565511605,1510.28613625853,1281.41044997377,1265.62838172746,1446.99283302766,1242.93013172189,1393.01238281405,1433.92974994108,1627.51185868585,1507.69040158063,1920.19240570628,1734.18503204522,1873.79218364772,1792.4543328709,2504.15555511323,2893.7182360098,2091.21600946058|short_description=p1@Col3a1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12825
|HGNC=
|MCL_coexpression_id=475
|TSSclassifier=NA
|UniProt=uniprot:P08121,uniprot:Q3TVI5,uniprot:Q9CSB7
|association_with_transcript=86bp_to_ENSMUST00000087883,ENSMUST00000129611,NM_009930,uc007awp.2,uc007awq.2_5end
|cluster_id=chr1:45368469..45368483,+
|description=CAGE_peak_1_at_Col3a1_5end
|id=chr1:45368469..45368483,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!5.40e-08!333
|ontology_enrichment_uberon_v019_2=
|phase1_expression=859.839160105639,19.5426228278042,14.1049764210756,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.6648780945253,2.83465374345756,0.699561878128147,0.157731082679119,0,0,287.106147550012,2.58156473122302,1.30599894569468,1.91990907352088,0.91763712426868,9.76194338995534,6.8921919385452,3.878482188346,4.18051522804023,3.52842181663903,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,1507.48849843956,1399.20440469174,169.413652245232,1307.37593640557,1.09012578190223,14.4992880604751,20.4151394027998,453.556006066175,102.06432069913,0,0,0,1235.35981184462,3606.88294194907,2077.64285978581,10.7227724255587,11.6378015439847,73.5244428067168,2297.70477196078,2265.03384569507,104.838317063283,86.0313735433268,70.3375313796639,922.16914017565,212.088504537498,52.4669438280897,48.3321259227453,53.6328651446024,171.96189261109,477.296916996437,2.08234358665422,3.73797336971122,11.0306254393203,7.70811166995721,5.61824287574826,2.30409799884365,8.44072241473241,25.6165402086747,48.4449434617787,10.6089539620525,16.8828783009504,18.0301932376636,334.108815927139,364.756246207302,125.260427594602,68.4564787731984,69.8281215386698,137.975496621999,188.432829058924,2.03991400112325,3.77792234146472,12.9955283489534,5.37632264516803,281.871951204426,268.598188383019,269.657872777778,282.318320033762,328.587698338996,483.790819851978,129.950672250389,49.7746692207332,0.216491041011214,0,0,51.9536652721723,72.5026074212081,28.3524485613815,772.009704109305,836.975599880076,831.830098602603,576.363377473229,889.793746895878,379.38743922429,383.399394956014,220.080221232106,125.614698376882,2472.28276774625,1076.60240249442,939.68824057606,309.410323622083,2.92780797011547,9.21565509979202,123.38575766575,0,0,0,2.39665023047716,1.83000241127451,3.26701315493447,2.43354048269187,7.16003280524926,2.0778804455956,7.78758062725237,4467.89657084108,1435.65644084047,59.1371254734799,67.9727194513311,147.296341433781,458.884600449212,621.574472088065,1338.56019201682,1155.39582858785,1029.00940132791,1072.22883413698,588.032761689783,73.9398215759649,347.009657107948,482.809884705876,1072.52471876812,1307.93426035721,2442.64069598648,3341.69611312859,828.977721299024,0,0,0,174.399900474893,359.997502070983,541.626680874733,571.975281173868,654.634599023613,893.515117843695,743.643555311804,1000.39151381918,825.88126656299,1410.93615315818,1776.62029626397,1199.1698308023,1003.80911366233,1050.54730166768,633.991122223996,1.26173969138476,43.9402694859545,9.91256348951394,122.705062931885,538.979409102536,839.767805447346,1010.06316184257,658.90007494446,710.94260617205,664.458112011169,791.514474656245,717.099248868343,1087.77878368757,1072.3753843018,1282.47376506957,833.205591822463,728.38522807772,519.161299374135,258.896684800957,522.22995113907,442.941401195206,568.390856016272,545.200441428196,615.441819537545,659.051189909009,169.899280324522,208.808308029028,154.616646394016,32.0168837254121,130.306027564269,147.026128344676,96.4658462131023,97.5757183878699,115.76503668116,160.668912474076,122.558554554045,135.707184810705,151.008777253445,280.348002728341,384.049457993895,587.566938474718,341.991800740389,242.365905668103,177.056772340356,128.95772673629,538.724083663488,616.333540903742,875.035917171095,692.336232451081,574.546463025428,701.990696972854,736.629520663191,1175.01236416755,1376.18158147749,1858.76423824033,923.533641737899,1145.59216969835,713.698455041178,0,0,574.380670886234,762.137293293671,6.90367536947505,17.2301179290539,313.443615560203,2069.25171936704,92.128400069547,96.0479310969731,52.3478856490701,102.99555191755,76.1971465361788,47.8399337033127,102.417107523748,93.8141303895311,71.5470878083208,1.92792789853084,418.581311279184,2742.56642768307,2822.17945776006,947.588386354244,102.213756521771,827.153627380022,834.110693665748,726.318162139964,1096.45592826631,1203.60860420048,1211.51183837262,1539.56534433724,1830.25754062716,1105.81261601742,733.713515681991,737.419134224536,10.8940673841212,305.563676571133,447.710404572113,598.643338843237,618.030714243323,978.352964547357,896.298515219753,770.905251158165,147.608504372074,257.799630241269,75.420712134797,2061.0781617685,4860.88656568024,3154.30566081762,3509.42754134821,2496.58308512238,904.173555225797,6.67531087237835,24.4345359540929,1064.13069121838,500.7660020077,178.384928783442,87.3476115137351,133.377674979403,0,0,0.138199973804424,181.387417422872,339.428521112558,1104.8379843673,1419.29818373929,1664.13374797916,1577.23279793864,1819.32003273123,2364.79802175759,1563.20648552862,1056.88049222128,87.6088431452565,5.6369293868419,437.485413724682,715.938888207861,1267.62729681485,1494.76663710778,1228.98685681992,1419.90523037498,1756.06653839036,645.618983629102,294.974211528553,395.753228598307,20.8567339614598,937.8068459323,700.796860735616,300.636784370618,300.764848721369,225.105974967173,200.005228001228,172.796746794255,200.01453734728,128.408469213675,85.3997788109039,49.0213140120955,47.3362260870421,40.9069157635491,165.73991042272,0,0.269141569828427,0.503653849092235,747.643728904577,3151.3764453008,1093.59834849984,738.713434306461,48.6524940914302,3.3885110557024,6.44455331110048,5.72895513439397,10.3111909406213,3.42541259885321,0.755393897389701,1.35004500046361,0,0,0.51776031175182,67.565563277299,197.916337206911,564.103833411659,1228.41824134609,290.314230239755,623.781024170898,1370.81781708036,1404.74702025478,1240.35274507237,1394.88860893616,1311.75537693199,1338.4925184756,1463.05491270944,1360.40643829866,1358.23396986234,1380.29911733835,1333.5968229734,1377.17892489039,1555.21218963168,1465.95404561846,1675.60203640753,1525.04960232719,1485.45746337181,1447.50496324136,1432.1565511605,1510.28613625853,1281.41044997377,1265.62838172746,1446.99283302766,1242.93013172189,1393.01238281405,1433.92974994108,1627.51185868585,1507.69040158063,1920.19240570628,1734.18503204522,1873.79218364772,1792.4543328709,2504.15555511323,2893.7182360098,2091.21600946058
|short_description=p1@Col3a1
}}

Revision as of 16:55, 5 August 2015

Short description:p1@Col3a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Col3a1_5end
Coexpression cluster:MCL_coexpression_mm9:475
Association with transcript: 86bp_to_ENSMUST00000087883, ENSMUST00000129611, NM_009930, uc007awp.2, uc007awq.2_5end
EntrezGene:12825
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Col3a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7859.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3287.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81507.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91399.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3169.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71307.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C4453.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C4102.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11235.36
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13606.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52077.64
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C773.52
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62297.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12265.03
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7104.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E786.03
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D270.34
Mouse Microglia, donor1.CNhs12629.11718-123C8922.17
Mouse Microglia, donor2.CNhs12634.11736-123E8212.09
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D552.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D953.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1171.96
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5477.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6334.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6364.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1125.26
Mouse Schwann, donor1.CNhs12507.11728-123D968.46
Mouse Schwann, donor2.CNhs12573.11746-123F969.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3137.98
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7188.43
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7281.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7268.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3269.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8282.32
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6328.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1483.79
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8129.95
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B651.95
accessory axillary lymph node, adult.CNhs10475.1063-29H972.50
adrenal gland, adult.CNhs10508.49-24D728.35
adrenal gland, embryo E14.CNhs11038.406-44C5772.01
adrenal gland, embryo E16.CNhs11004.1254-43D6836.98
adrenal gland, embryo E17.CNhs11043.1263-45I1831.83
adrenal gland, embryo E18.CNhs11026.1262-18F5576.36
adrenal gland, neonate N00.CNhs11191.1311-23C1889.79
adrenal gland, neonate N25.CNhs11223.1377-27I3379.39
amnion, adult pregnant day17.5.CNhs10488.583-22A8383.40
aorta, adult.CNhs10498.46-23H1220.08
bone (os femoris), adult.CNhs10483.56-12G2125.61
bone (os femoris), neonate N02.CNhs11227.1985-43F52472.28
bone (os femoris), neonate N16.CNhs11225.1525-43A61076.60
bone (os femoris), neonate N20.CNhs11195.1350-25C3939.69
cecum, adult.CNhs10467.37-13H4309.41
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H7123.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14467.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21435.66
epididymis, adult.CNhs10490.58-23B259.14
eyeball, adult.CNhs10484.31-12G467.97
eyeball, embryo E12.CNhs11016.345-16C6147.30
eyeball, embryo E14.CNhs10521.399-16E2458.88
eyeball, embryo E15.CNhs10593.426-16C9621.57
eyeball, embryo E17.CNhs11023.1261-18D41338.56
eyeball, neonate N00.CNhs11207.633-15C61155.40
eyeball, neonate N01.CNhs11140.1532-43E71029.01
eyeball, neonate N02.CNhs11205.1551-44G81072.23
eyeball, neonate N16.CNhs11188.777-19A2588.03
forelimb, embryo E11.CNhs10596.335-25E273.94
forelimb, embryo E12.CNhs10600.359-14H2347.01
forelimb, embryo E13.CNhs10589.384-1E2482.81
forelimb, embryo E14.CNhs10577.413-26A81072.52
forelimb, embryo E15.CNhs11007.437-20E71307.93
forelimb, embryo E17.CNhs10598.1517-43C42442.64
forelimb, embryo E18.CNhs11008.1520-43B53341.70
gonad, embryo E13.CNhs11044.1564-45I6828.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E9174.40
heart, embryo E12.CNhs11015.353-12F5360.00
heart, embryo E13.CNhs11013.376-3I9541.63
heart, embryo E14.CNhs10597.403-26D4571.98
heart, embryo E15.CNhs11017.431-16C8654.63
heart, embryo E16.CNhs11021.457-17C6893.52
heart, embryo E17.CNhs11025.479-18E5743.64
heart, embryo E18.CNhs11030.1283-20G31000.39
heart, neonate N00.CNhs11213.639-21E3825.88
heart, neonate N03.CNhs11221.1349-25I21410.94
heart, neonate N10.CNhs11118.749-24G11776.62
heart, neonate N16.CNhs11209.782-15G11199.17
heart, neonate N20.CNhs11127.821-26I61003.81
heart, neonate N25.CNhs11196.1351-25D31050.55
heart, neonate N30.CNhs11202.1390-42D2633.99
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G143.94
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A3122.71
intestine, embryo E12.CNhs11019.1251-16I5538.98
intestine, embryo E13.CNhs11010.381-16D5839.77
intestine, embryo E15.CNhs10602.976-16D81010.06
intestine, embryo E16.CNhs10585.463-22H4658.90
intestine, embryo E17.CNhs10582.482-18D3710.94
intestine, embryo E18.CNhs10526.1289-20F7664.46
intestine, neonate N00.CNhs11126.644-26D1791.51
intestine, neonate N01.CNhs11192.1322-23E9717.10
intestine, neonate N06.CNhs11102.688-20B81087.78
intestine, neonate N07.CNhs11095.720-20F21072.38
intestine, neonate N10.CNhs11098.755-23A51282.47
intestine, neonate N20.CNhs11187.827-18D1833.21
intestine, neonate N25.CNhs11121.1352-25E3728.39
intestine, neonate N30.CNhs11131.1384-42G1519.16
kidney, embryo E14.CNhs10606.411-4I9258.90
kidney, embryo E15.CNhs10997.434-16F8522.23
kidney, embryo E16.CNhs10584.464-22A5442.94
kidney, embryo E17.CNhs11028.483-18I2568.39
kidney, embryo E18.CNhs11001.1288-20C7545.20
kidney, neonate N00.CNhs11214.646-21G7615.44
kidney, neonate N10.CNhs11206.758-6D5659.05
kidney, neonate N20.CNhs11113.832-19I1169.90
kidney, neonate N25.CNhs11122.1353-25F3208.81
kidney, neonate N30.CNhs11203.1385-42H1154.62
liver, adult pregnant day01.CNhs10466.508-5B232.02
liver, embryo E12.CNhs10601.355-15F8130.31
liver, embryo E13.CNhs10524.378-3H6147.03
liver, embryo E14.CNhs10594.409-16E196.47
liver, embryo E15.CNhs10520.433-16D797.58
liver, embryo E16.CNhs10523.462-17F5115.77
liver, embryo E17.CNhs10510.481-18A3160.67
liver, embryo E18.CNhs10579.499-43G4122.56
liver, neonate N00.CNhs11117.641-24F4135.71
liver, neonate N03.CNhs11123.1345-25G2151.01
liver, neonate N06.CNhs11101.684-20A8280.35
liver, neonate N07.CNhs11103.716-20H2384.05
liver, neonate N10.CNhs11115.751-24B9587.57
liver, neonate N20.CNhs11220.823-25A3341.99
liver, neonate N25.CNhs11198.1368-26H1242.37
liver, neonate N30.CNhs11106.1382-42D1177.06
lung, adult.CNhs10474.28-22B1128.96
lung, embryo E12.CNhs10522.354-16G2538.72
lung, embryo E14.CNhs10604.404-26F8616.33
lung, embryo E15.CNhs11020.432-17C5875.04
lung, embryo E16.CNhs10998.458-17B6692.34
lung, embryo E17.CNhs10605.480-44A6574.55
lung, embryo E18.CNhs10583.1287-20I6701.99
lung, neonate N00.CNhs11224.640-42C6736.63
lung, neonate N06.CNhs11212.683-20E51175.01
lung, neonate N07.CNhs11111.715-19A31376.18
lung, neonate N10.CNhs11219.750-23E61858.76
lung, neonate N20.CNhs11109.822-18A4923.53
lung, neonate N25.CNhs11119.1359-25C71145.59
lung, neonate N30.CNhs11133.1394-42H2713.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B6574.38
mammary gland, adult pregnant day19.CNhs10476.588-5H2762.14
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A317.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7313.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22069.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E192.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E296.05
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7103.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.20
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D947.84
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4102.42
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D593.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D671.55
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I7418.58
ovary, embryo E18.CNhs11040.505-44H72742.57
ovary, neonate N00.CNhs11217.1299-22I42822.18
oviduct, adult pregnant day01.CNhs10500.988-6G6947.59
pancreas, adult.CNhs10486.34-16E4102.21
pancreas, embryo E14.CNhs11012.405-44F4827.15
pancreas, embryo E15.CNhs11042.1556-45F2834.11
pancreas, embryo E16.CNhs11003.460-26E5726.32
pancreas, embryo E17.CNhs10599.1558-45G31096.46
pancreas, embryo E18.CNhs10580.1535-43I71203.61
pancreas, neonate N00.CNhs11105.645-26G91211.51
pancreas, neonate N01.CNhs11138.1531-43D71539.57
pancreas, neonate N02.CNhs11139.1539-43D81830.26
pancreas, neonate N16.CNhs11136.787-43B61105.81
pancreas, neonate N25.CNhs11094.1555-45E2733.71
pancreas, neonate N30.CNhs11182.1548-44H5737.42
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E6305.56
pituitary gland, embryo E13.CNhs11009.370-44C7447.71
pituitary gland, embryo E14.CNhs11037.398-44A5598.64
pituitary gland, embryo E15.CNhs10592.427-16B9618.03
pituitary gland, embryo E16.CNhs11036.449-43F6978.35
pituitary gland, embryo E17.CNhs11039.1265-44F5896.30
pituitary gland, neonate N00.CNhs11190.1308-22E9770.91
placenta, adult pregnant day10.CNhs10472.539-13I7147.61
placenta, adult pregnant day17.CNhs10464.577-18G3257.80
prostate, adult.CNhs10470.859-1F875.42
skin, adult.CNhs10492.30-1C32061.08
skin, neonate N00.CNhs11124.650-25G44860.89
skin, neonate N03.CNhs11215.662-22H33154.31
skin, neonate N06.CNhs11097.693-20I53509.43
skin, neonate N10.CNhs11108.762-6C42496.58
small intestine, neonate N16.CNhs11114.790-21I1904.17
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G224.43
spleen, embryo E16.CNhs11035.461-43C11064.13
spleen, embryo E18.CNhs11011.1271-21F2500.77
spleen, neonate N10.CNhs11116.752-24D1178.38
spleen, neonate N20.CNhs11112.824-19H187.35
spleen, neonate N25.CNhs11099.1354-25G3133.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H6181.39
stomach, embryo E12.CNhs10588.356-43E3339.43
stomach, embryo E15.CNhs10603.1252-16G81104.84
stomach, embryo E16.CNhs11022.459-17D41419.30
stomach, embryo E17.CNhs11006.1035-18D51664.13
stomach, embryo E18.CNhs10999.1286-20C61577.23
stomach, neonate N03.CNhs11193.1340-24B81819.32
stomach, neonate N07.CNhs11210.718-18A92364.80
stomach, neonate N25.CNhs11104.1355-25E41563.21
stomach, neonate N30.CNhs11134.1386-42I11056.88
submandibular gland, adult.CNhs10469.59-29C187.61
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F5437.49
testis, embryo E15.CNhs11034.443-27C5715.94
testis, embryo E16.CNhs11033.470-26G51267.63
testis, embryo E17.CNhs11029.486-18I51494.77
testis, embryo E18.CNhs11027.503-18G51228.99
testis, neonate N00.CNhs11189.1300-22B71419.91
testis, neonate N07.CNhs11222.726-26I41756.07
testis, neonate N10.CNhs11204.763-44D9645.62
testis, neonate N20.CNhs11110.839-18H3294.97
testis, neonate N30.CNhs11130.1391-42E2395.75
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I4937.81
thymus, embryo E15.CNhs11005.430-45I2700.80
thymus, embryo E16.CNhs11002.456-26C5300.64
thymus, embryo E17.CNhs10581.478-18C1300.76
thymus, embryo E18.CNhs10595.1273-19G4225.11
thymus, neonate N02.CNhs11181.1541-43F8200.01
thymus, neonate N03.CNhs11137.2104-43C7172.80
thymus, neonate N06.CNhs11197.681-26C4200.01
thymus, neonate N07.CNhs11211.713-19D3128.41
thymus, neonate N10.CNhs11194.748-24E485.40
thymus, neonate N20.CNhs11186.820-7A249.02
thymus, neonate N25.CNhs11125.1362-25G747.34
thymus, neonate N30.CNhs11132.1393-42G240.91
tongue, adult.CNhs10499.32-1B4165.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E4747.64
uterus, adult pregnant day19.CNhs10497.590-15F53151.38
uterus, adult.CNhs10509.92-27E51093.60
vagina, adult.CNhs10502.89-27D5738.71
vesicular gland, adult.CNhs10491.51-27F848.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I867.57
whole body, embryo E12.CNhs10587.857-27C9197.92
whole body, embryo E13.CNhs10512.372-23H2564.10
whole body, embryo E14.5.CNhs10578.420-27D21228.42
whole body, embryo E14.CNhs10519.395-14B1290.31
whole body, embryo E16.CNhs10514.453-14F2623.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51370.82
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51404.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51240.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51394.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51311.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51338.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51463.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51360.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51358.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51380.30
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51333.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51377.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51555.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51465.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51675.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51525.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51485.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51447.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51432.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51281.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51265.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51446.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51242.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51393.01
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51433.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51627.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51507.69
whole body, embryo E17.5.CNhs10513.490-9F91920.19
whole body, embryo E17.CNhs10517.475-3I51734.19
whole body, embryo E18.CNhs10516.493-3B31873.79
whole body, neonate N00.CNhs10525.657-19C21792.45
whole body, neonate N01.CNhs10576.659-23C62504.16
whole body, neonate N06.CNhs10515.692-21D12893.72
whole body, neonate N10.CNhs10518.761-6B42091.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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