FFCP PHASE1:Mm9::chr13:24695728..24695736,-: Difference between revisions
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{{FFCP|EntrezGene=76024|HGNC=|MCL_coexpression_id=285|UniProt=|association_with_transcript=371bp_to_uc007pvy.2_5end|description=CAGE_peak_6_at_Gm11346_5end|id=chr13:24695728..24695736,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,5.62e-30,1;CL:0000792,5.62e-30,1;CL:0000624,1.23e-15,8;CL:0000791,4.91e-14,9;CL:0000789,4.91e-14,9;CL:0002420,4.91e-14,9;CL:0002419,4.91e-14,9;CL:0000790,4.91e-14,9;CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0000838,8.07e-11,12;CL:0000542,4.49e-10,13;CL:0000051,4.49e-10,13;CL:0000738,5.82e-08,17;CL:0002087,5.82e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.78e-15!29;UBERON:0002193!1.87e-15!48;UBERON:0002390!6.25e-14!45;UBERON:0003061!6.25e-14!45;UBERON:0002370!9.20e-13!23;UBERON:0000974!9.20e-13!23;UBERON:0004807!9.20e-13!23;UBERON:0005058!9.20e-13!23;UBERON:0003351!9.20e-13!23;UBERON:0009113!9.20e-13!23;UBERON:0003295!9.20e-13!23;UBERON:0009722!9.20e-13!23;UBERON:0005562!9.20e-13!23;UBERON:0007690!9.20e-13!23;UBERON:0006562!3.42e-12!24;UBERON:0003408!3.42e-12!24;UBERON:0001557!3.42e-12!24;UBERON:0001042!3.42e-12!24;UBERON:0008814!3.42e-12!24;UBERON:0009145!3.42e-12!24;UBERON:0000072!9.86e-11!27;UBERON:0002405!5.53e-10!70;UBERON:0003081!6.37e-09!88;UBERON:0000065!1.61e-08!41;UBERON:0001004!2.74e-08!42;UBERON:0005057!3.38e-08!51;UBERON:0000063!4.64e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.513602189793617,1.92324885321794,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Gm11346}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76024 | |||
|HGNC= | |||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=371bp_to_uc007pvy.2_5end | |||
|cluster_id=chr13:24695728..24695736,- | |||
|description=CAGE_peak_6_at_Gm11346_5end | |||
|id=chr13:24695728..24695736,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.62e-30,1;CL:0000792,5.62e-30,1;CL:0000624,1.23e-15,8;CL:0000791,4.91e-14,9;CL:0000789,4.91e-14,9;CL:0002420,4.91e-14,9;CL:0002419,4.91e-14,9;CL:0000790,4.91e-14,9;CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0000838,8.07e-11,12;CL:0000542,4.49e-10,13;CL:0000051,4.49e-10,13;CL:0000738,5.82e-08,17;CL:0002087,5.82e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.78e-15!29;UBERON:0002193!1.87e-15!48;UBERON:0002390!6.25e-14!45;UBERON:0003061!6.25e-14!45;UBERON:0002370!9.20e-13!23;UBERON:0000974!9.20e-13!23;UBERON:0004807!9.20e-13!23;UBERON:0005058!9.20e-13!23;UBERON:0003351!9.20e-13!23;UBERON:0009113!9.20e-13!23;UBERON:0003295!9.20e-13!23;UBERON:0009722!9.20e-13!23;UBERON:0005562!9.20e-13!23;UBERON:0007690!9.20e-13!23;UBERON:0006562!3.42e-12!24;UBERON:0003408!3.42e-12!24;UBERON:0001557!3.42e-12!24;UBERON:0001042!3.42e-12!24;UBERON:0008814!3.42e-12!24;UBERON:0009145!3.42e-12!24;UBERON:0000072!9.86e-11!27;UBERON:0002405!5.53e-10!70;UBERON:0003081!6.37e-09!88;UBERON:0000065!1.61e-08!41;UBERON:0001004!2.74e-08!42;UBERON:0005057!3.38e-08!51;UBERON:0000063!4.64e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.513602189793617,1.92324885321794,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Gm11346 | |||
}} |
Revision as of 20:04, 5 August 2015
Short description: | p6@Gm11346 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gm11346_5end |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | 371bp_to_uc007pvy.2_5end |
EntrezGene: | 76024 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.62e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.62e-30 | 1 |
CD4-positive, alpha-beta T cell | 1.23e-15 | 8 |
mature alpha-beta T cell | 4.91e-14 | 9 |
alpha-beta T cell | 4.91e-14 | 9 |
immature T cell | 4.91e-14 | 9 |
mature T cell | 4.91e-14 | 9 |
immature alpha-beta T cell | 4.91e-14 | 9 |
T cell | 1.07e-11 | 11 |
pro-T cell | 1.07e-11 | 11 |
lymphoid lineage restricted progenitor cell | 8.07e-11 | 12 |
lymphocyte | 4.49e-10 | 13 |
common lymphoid progenitor | 4.49e-10 | 13 |
leukocyte | 5.82e-08 | 17 |
nongranular leukocyte | 5.82e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.10e-29 | 1 |
axillary lymph node | 1.10e-29 | 1 |
peripheral lymph node | 1.10e-29 | 1 |
shoulder | 1.10e-29 | 1 |
lymphoid system | 7.15e-11 | 3 |