Personal tools

FFCP PHASE1:Mm9::chr11:34934628..34934643,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=20564|HGNC=|MCL_coexpression_id=2664|UniProt=Q9WVB4|association_with_transcript=-82bp_to_ENSMUST00000069837_5end|description=CAGE_peak_3_at_Slit3_5end|id=chr11:34934628..34934643,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!6.18e-10!57;UBERON:0000468!1.59e-09!333;UBERON:0005153!3.44e-08!17;UBERON:0002048!4.87e-08!14;UBERON:0000117!4.87e-08!14;UBERON:0000171!4.87e-08!14;UBERON:0000170!4.87e-08!14;UBERON:0005597!4.87e-08!14;UBERON:0000118!4.87e-08!14;UBERON:0003102!9.28e-08!23;UBERON:0000922!2.55e-07!328;UBERON:0002323!6.20e-07!37;UBERON:0004458!6.20e-07!37;UBERON:0003886!8.20e-07!38;UBERON:0004872!8.54e-07!33;UBERON:0002553!9.22e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.12e-08,17;UBERON:0002048,3.03e-08,14;UBERON:0000117,3.03e-08,14;UBERON:0000171,3.03e-08,14;UBERON:0000170,3.03e-08,14;UBERON:0005597,3.03e-08,14;UBERON:0000118,3.03e-08,14;UBERON:0003102,3.03e-08,22;UBERON:0002323,4.89e-07,37;UBERON:0004458,4.89e-07,37;UBERON:0003886,6.51e-07,38;UBERON:0002553,7.32e-07,39;UBERON:0005157,9.94e-07,20|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,7.65389611359628,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.0456076305457,46.5320114297572,35.2409764150429,28.9484797408774,2.8343270329458,7.0299578475031,5.24960727500565,5.31948402176378,10.062679505548,0,0,0,10.5476368774738,22.9226751951005,20.6268836910977,0,0.528990979272033,0.633831403506179,5.76035704517525,3.55717918444456,0,0,0.7104801149461,6.5912024314049,1.53687322128622,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.489963196859816,0.479227355091182,0,0,1.78762273319263,0.768032666281217,0.395658863190582,0.457438218012048,0,0.279182999001381,0.56276261003168,1.5279824777681,0.589257170947335,0.427115042397309,0.931997229126503,0.37863096666592,2.34271836331035,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0,0,18.3096445709685,0,0,0,0,0,0,1.94112595522402,2.84831672011889,3.26572705942614,7.28638372417771,4.26251669636998,2.53677046981664,3.3158980921577,6.58496759959947,2.63899841792318,5.19109432242185,22.1237016087465,3.5384422077995,9.86777784679196,7.06692859073259,12.1218813283806,1.86391761218122,1.17112318804619,1.67557365450764,1.02182822083437,0,0,0,0.449371918214468,3.20250421973039,0.251308704225729,2.9550134432687,2.30143911597297,0.41557608911912,1.78465389374533,14.8685471221462,11.1966273549084,3.0326731012041,2.10441855886474,4.55421550369463,1.83921683546778,3.60124259610698,3.61691562805716,2.24520447199382,3.07472928683639,2.34254311399322,4.39795730256327,13.7963515477019,12.2918952109083,9.50136070485324,5.91828477554452,11.1218899690239,9.75106066262066,10.2891068203972,5.7719937377363,0,0,0,12.0132948070591,12.6644072389792,6.48223421259654,9.46978942340841,6.88674811115913,6.32495162838251,3.48800917125612,4.82892122519315,5.60473643362414,5.75959474697182,3.11918181750281,4.53985333456792,5.11699955988663,4.83010253640311,4.02619256281115,4.6263788684108,3.80747065803352,0,4.7601101999438,7.67837701926842,8.59275685883622,6.82997545007095,3.83198696784351,4.22518283305254,1.71203063501303,1.89811624617805,3.78807595865225,4.02136334080431,4.57599885694647,3.50935356814416,2.69645822596266,1.51296634912286,1.39398891278057,4.1726938209678,7.65465034485183,9.01661885384643,6.72049381889537,4.26695471768777,4.69909993265134,6.19718063817721,5.01874503130647,2.511979645462,2.34454611451421,0,1.33476084572875,1.57247196090562,0.224862112384854,0.405720242777006,0,0,0.863088412352432,0.810676133875177,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,10.9004382198297,13.6433816474749,8.8001087278694,12.5611363473639,7.27539769694356,8.04030035720716,9.99783291721258,9.17128144931655,15.1329738341943,15.723992965063,14.1914744105164,13.4367918066905,13.1240586218081,14.1756077409881,0,0,2.95058563811422,7.17435540392304,0.642202359951168,0.820481806145422,7.54100748732707,3.53459298086122,1.26203287766503,1.56175497718655,1.07711698866399,1.91175038362042,2.45078541490634,1.13230612315533,2.83367491172426,2.33804686329049,0.395287777946524,0.321321316421807,14.6198287764517,7.12262414669021,11.4020871547503,7.4236555337641,7.96470830039777,10.4395673546642,10.883648050731,13.7681708221806,13.2885851796348,12.604841065701,9.56184684722418,22.1755574981278,14.2598951353889,7.26884543252377,6.32511651449993,6.18813259489121,0.340439605753788,5.76195500900193,2.8458910432206,4.92975180572662,4.25616560741457,8.91844088010353,9.21474515371877,4.26250928760439,15.0189893160775,5.71946591332314,8.82113592219848,33.6367956000619,22.9279485908186,11.218204036637,8.11731939221328,9.68431308495861,2.62332752966866,0.556275906031529,1.36696704638282,7.84270098260245,11.2968661695524,1.50694765603753,1.36694227721025,0.457556346413045,0,0,0,2.86401185404534,6.80122386199441,6.09958401380546,4.86024033698106,5.01811910434725,3.05707589244649,7.41753905116514,4.95920734352016,5.23511883968059,3.24037433229482,3.72803587852155,0,3.73791365109947,2.15096037594227,2.91676782516071,3.09983576346555,3.54807863530634,5.51579021635044,7.16124116641726,9.43734099831398,3.8653459332161,4.32045009386798,0.948033361884535,8.91990947276722,4.5192821152524,2.07873316764472,1.61124026100733,0.993406773906324,0.600977247599844,0.295379054349154,0.403865799792591,0.381034033274999,0.100826185136841,0.194915761479505,0.192423683280659,1.05189211963412,5.21479882314986,0.221985953374065,0,0,24.341888848056,45.0437941082837,4.76194223094889,5.14484109789758,6.01886524842436,0,1.84130094602871,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,2.70192721934532,0.453142408984205,1.03552062350364,1.764384908931,13.167820822234,5.80494259564056,7.77941494618541,2.09613162627982,3.49302666055027,6.88964856185007,6.18105171716683,3.53011130550997,7.32821914115013,8.11133759648767,6.60192194851267,5.05664140337365,6.72264100251127,5.45636955078326,9.52587382566147,5.33067899346335,7.13764115715709,6.1812885120496,6.47675248591348,9.60033906679163,6.03417740941747,5.96090474868302,4.94177816549917,5.36423468367385,7.27685627868418,6.40247905054704,4.47218509444333,6.79020569229309,10.1005608898393,6.64356101495375,6.79680928391388,3.27384834535751,5.26785260032284,8.10207766120794,6.74488560432454,8.4215379040347,7.73535794573874,7.07766828654721,5.29419405886837,4.17362104116759|short_description=p3@Slit3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20564
|HGNC=
|MCL_coexpression_id=2664
|TSSclassifier=NA
|UniProt=uniprot:Q9WVB4
|association_with_transcript=-82bp_to_ENSMUST00000069837_5end
|cluster_id=chr11:34934628..34934643,+
|description=CAGE_peak_3_at_Slit3_5end
|id=chr11:34934628..34934643,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!6.18e-10!57;UBERON:0000468!1.59e-09!333;UBERON:0005153!3.44e-08!17;UBERON:0002048!4.87e-08!14;UBERON:0000117!4.87e-08!14;UBERON:0000171!4.87e-08!14;UBERON:0000170!4.87e-08!14;UBERON:0005597!4.87e-08!14;UBERON:0000118!4.87e-08!14;UBERON:0003102!9.28e-08!23;UBERON:0000922!2.55e-07!328;UBERON:0002323!6.20e-07!37;UBERON:0004458!6.20e-07!37;UBERON:0003886!8.20e-07!38;UBERON:0004872!8.54e-07!33;UBERON:0002553!9.22e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.12e-08,17;UBERON:0002048,3.03e-08,14;UBERON:0000117,3.03e-08,14;UBERON:0000171,3.03e-08,14;UBERON:0000170,3.03e-08,14;UBERON:0005597,3.03e-08,14;UBERON:0000118,3.03e-08,14;UBERON:0003102,3.03e-08,22;UBERON:0002323,4.89e-07,37;UBERON:0004458,4.89e-07,37;UBERON:0003886,6.51e-07,38;UBERON:0002553,7.32e-07,39;UBERON:0005157,9.94e-07,20
|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,7.65389611359628,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.0456076305457,46.5320114297572,35.2409764150429,28.9484797408774,2.8343270329458,7.0299578475031,5.24960727500565,5.31948402176378,10.062679505548,0,0,0,10.5476368774738,22.9226751951005,20.6268836910977,0,0.528990979272033,0.633831403506179,5.76035704517525,3.55717918444456,0,0,0.7104801149461,6.5912024314049,1.53687322128622,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.489963196859816,0.479227355091182,0,0,1.78762273319263,0.768032666281217,0.395658863190582,0.457438218012048,0,0.279182999001381,0.56276261003168,1.5279824777681,0.589257170947335,0.427115042397309,0.931997229126503,0.37863096666592,2.34271836331035,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0,0,18.3096445709685,0,0,0,0,0,0,1.94112595522402,2.84831672011889,3.26572705942614,7.28638372417771,4.26251669636998,2.53677046981664,3.3158980921577,6.58496759959947,2.63899841792318,5.19109432242185,22.1237016087465,3.5384422077995,9.86777784679196,7.06692859073259,12.1218813283806,1.86391761218122,1.17112318804619,1.67557365450764,1.02182822083437,0,0,0,0.449371918214468,3.20250421973039,0.251308704225729,2.9550134432687,2.30143911597297,0.41557608911912,1.78465389374533,14.8685471221462,11.1966273549084,3.0326731012041,2.10441855886474,4.55421550369463,1.83921683546778,3.60124259610698,3.61691562805716,2.24520447199382,3.07472928683639,2.34254311399322,4.39795730256327,13.7963515477019,12.2918952109083,9.50136070485324,5.91828477554452,11.1218899690239,9.75106066262066,10.2891068203972,5.7719937377363,0,0,0,12.0132948070591,12.6644072389792,6.48223421259654,9.46978942340841,6.88674811115913,6.32495162838251,3.48800917125612,4.82892122519315,5.60473643362414,5.75959474697182,3.11918181750281,4.53985333456792,5.11699955988663,4.83010253640311,4.02619256281115,4.6263788684108,3.80747065803352,0,4.7601101999438,7.67837701926842,8.59275685883622,6.82997545007095,3.83198696784351,4.22518283305254,1.71203063501303,1.89811624617805,3.78807595865225,4.02136334080431,4.57599885694647,3.50935356814416,2.69645822596266,1.51296634912286,1.39398891278057,4.1726938209678,7.65465034485183,9.01661885384643,6.72049381889537,4.26695471768777,4.69909993265134,6.19718063817721,5.01874503130647,2.511979645462,2.34454611451421,0,1.33476084572875,1.57247196090562,0.224862112384854,0.405720242777006,0,0,0.863088412352432,0.810676133875177,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,10.9004382198297,13.6433816474749,8.8001087278694,12.5611363473639,7.27539769694356,8.04030035720716,9.99783291721258,9.17128144931655,15.1329738341943,15.723992965063,14.1914744105164,13.4367918066905,13.1240586218081,14.1756077409881,0,0,2.95058563811422,7.17435540392304,0.642202359951168,0.820481806145422,7.54100748732707,3.53459298086122,1.26203287766503,1.56175497718655,1.07711698866399,1.91175038362042,2.45078541490634,1.13230612315533,2.83367491172426,2.33804686329049,0.395287777946524,0.321321316421807,14.6198287764517,7.12262414669021,11.4020871547503,7.4236555337641,7.96470830039777,10.4395673546642,10.883648050731,13.7681708221806,13.2885851796348,12.604841065701,9.56184684722418,22.1755574981278,14.2598951353889,7.26884543252377,6.32511651449993,6.18813259489121,0.340439605753788,5.76195500900193,2.8458910432206,4.92975180572662,4.25616560741457,8.91844088010353,9.21474515371877,4.26250928760439,15.0189893160775,5.71946591332314,8.82113592219848,33.6367956000619,22.9279485908186,11.218204036637,8.11731939221328,9.68431308495861,2.62332752966866,0.556275906031529,1.36696704638282,7.84270098260245,11.2968661695524,1.50694765603753,1.36694227721025,0.457556346413045,0,0,0,2.86401185404534,6.80122386199441,6.09958401380546,4.86024033698106,5.01811910434725,3.05707589244649,7.41753905116514,4.95920734352016,5.23511883968059,3.24037433229482,3.72803587852155,0,3.73791365109947,2.15096037594227,2.91676782516071,3.09983576346555,3.54807863530634,5.51579021635044,7.16124116641726,9.43734099831398,3.8653459332161,4.32045009386798,0.948033361884535,8.91990947276722,4.5192821152524,2.07873316764472,1.61124026100733,0.993406773906324,0.600977247599844,0.295379054349154,0.403865799792591,0.381034033274999,0.100826185136841,0.194915761479505,0.192423683280659,1.05189211963412,5.21479882314986,0.221985953374065,0,0,24.341888848056,45.0437941082837,4.76194223094889,5.14484109789758,6.01886524842436,0,1.84130094602871,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,2.70192721934532,0.453142408984205,1.03552062350364,1.764384908931,13.167820822234,5.80494259564056,7.77941494618541,2.09613162627982,3.49302666055027,6.88964856185007,6.18105171716683,3.53011130550997,7.32821914115013,8.11133759648767,6.60192194851267,5.05664140337365,6.72264100251127,5.45636955078326,9.52587382566147,5.33067899346335,7.13764115715709,6.1812885120496,6.47675248591348,9.60033906679163,6.03417740941747,5.96090474868302,4.94177816549917,5.36423468367385,7.27685627868418,6.40247905054704,4.47218509444333,6.79020569229309,10.1005608898393,6.64356101495375,6.79680928391388,3.27384834535751,5.26785260032284,8.10207766120794,6.74488560432454,8.4215379040347,7.73535794573874,7.07766828654721,5.29419405886837,4.17362104116759
|short_description=p3@Slit3
}}

Revision as of 20:52, 5 August 2015

Short description:p3@Slit3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Slit3_5end
Coexpression cluster:MCL_coexpression_mm9:2664
Association with transcript: -82bp_to_ENSMUST00000069837_5end
EntrezGene:20564
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Slit3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D859.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D946.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H122.12
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.20
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H212.29
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E912.01
heart, embryo E12.CNhs11015.353-12F512.66
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I65.12
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F87.65
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D56.20
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G213.64
lung, embryo E14.CNhs10604.404-26F88.80
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E515.13
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E614.19
lung, neonate N20.CNhs11109.822-18A413.44
lung, neonate N25.CNhs11119.1359-25C713.12
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I714.62
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E513.77
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G99.56
pancreas, neonate N01.CNhs11138.1531-43D722.18
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F68.92
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C333.64
skin, neonate N00.CNhs11124.650-25G422.93
skin, neonate N03.CNhs11215.662-22H311.22
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F211.30
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D99.44
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I48.92
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E424.34
uterus, adult pregnant day19.CNhs10497.590-15F545.04
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C913.17
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial bud2.12e-0817
lung3.03e-0814
respiratory tube3.03e-0814
respiration organ3.03e-0814
pair of lungs3.03e-0814
lung primordium3.03e-0814
lung bud3.03e-0814
surface structure3.03e-0822
body cavity4.89e-0737
body cavity or lining4.89e-0737
body cavity precursor6.51e-0738
anatomical cavity7.32e-0739
epithelial fold9.94e-0720
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:34934628..34934643,%2B&oldid=3940671"