FFCP PHASE1:Mm9::chrX:106392089..106392102,+: Difference between revisions
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{{FFCP|EntrezGene=622976|HGNC=|MCL_coexpression_id=18|UniProt=Q8BHV4,A2ALN9|association_with_transcript=0bp_to_ENSMUST00000060013,ENSMUST00000139259,NM_001037917,uc009ucu.2_5end|description=CAGE_peak_3_at_Gm6377_5end|id=chrX:106392089..106392102,+|ontology_enrichment_celltype=CL:0000049!2.61e-10!19;CL:0000553!2.96e-10!6;CL:0000556!2.96e-10!6;CL:0000763!8.61e-09!16;CL:0000988!4.71e-08!32;CL:0002032!4.71e-08!32;CL:0000037!4.71e-08!32;CL:0000566!4.71e-08!32;CL:0000837!4.71e-08!32;CL:0000839!2.19e-07!13|ontology_enrichment_celltype_v019_2=CL:0000839,4.25e-22,13;CL:0000553,5.69e-22,6;CL:0000556,5.69e-22,6;CL:0000763,6.06e-18,16;CL:0002476,9.93e-17,2;CL:0002031,1.56e-15,25;CL:0000049,4.27e-15,19;CL:0000050,8.80e-15,9;CL:0000988,4.61e-12,32;CL:0002032,4.61e-12,32;CL:0000037,4.61e-12,32;CL:0000837,4.61e-12,32;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0002194,7.64e-09,4;CL:0000766,7.64e-09,4;CL:0000234,7.64e-09,4;CL:0000576,7.64e-09,4;CL:0000235,7.64e-09,4;CL:0000864,7.64e-09,4;CL:0002009,7.64e-09,4;CL:0000040,7.64e-09,4;CL:0000559,7.64e-09,4;CL:0002320,2.86e-08,46;CL:0000134,2.86e-08,46;CL:0000219,5.61e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.38e-14!70;UBERON:0002193!3.71e-11!48;UBERON:0002371!8.40e-11!16;UBERON:0002390!8.89e-10!45;UBERON:0003061!8.89e-10!45;UBERON:0001474!1.10e-09!22;UBERON:0004765!1.10e-09!22;UBERON:0001434!1.10e-09!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-18,16;UBERON:0001474,5.09e-13,22;UBERON:0004765,5.09e-13,22;UBERON:0001434,5.09e-13,22;UBERON:0002193,6.46e-13,48;UBERON:0002405,6.46e-13,48;UBERON:0002390,7.18e-11,45;UBERON:0003061,7.18e-11,45;UBERON:0000029,1.73e-09,1;UBERON:0001097,1.73e-09,1;UBERON:0003968,1.73e-09,1;UBERON:0001467,1.73e-09,1;UBERON:0002204,6.81e-09,32;UBERON:0002384,2.86e-08,46|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,2.83465374345756,0.699561878128147,7.72882305127682,7.95263714913285,5.09267582157636,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2615215149076,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50919862576798,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0.268412837520744,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.889357881261447,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,3.2465467351592,0,0,0.565105371014073,0.683471138605126,1.60144721244566,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p3@Gm6377}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:622976 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BHV4,uniprot:A2ALN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000060013,ENSMUST00000139259,NM_001037917,uc009ucu.2_5end | |||
|cluster_id=chrX:106392089..106392102,+ | |||
|description=CAGE_peak_3_at_Gm6377_5end | |||
|id=chrX:106392089..106392102,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.61e-10!19;CL:0000553!2.96e-10!6;CL:0000556!2.96e-10!6;CL:0000763!8.61e-09!16;CL:0000988!4.71e-08!32;CL:0002032!4.71e-08!32;CL:0000037!4.71e-08!32;CL:0000566!4.71e-08!32;CL:0000837!4.71e-08!32;CL:0000839!2.19e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.25e-22,13;CL:0000553,5.69e-22,6;CL:0000556,5.69e-22,6;CL:0000763,6.06e-18,16;CL:0002476,9.93e-17,2;CL:0002031,1.56e-15,25;CL:0000049,4.27e-15,19;CL:0000050,8.80e-15,9;CL:0000988,4.61e-12,32;CL:0002032,4.61e-12,32;CL:0000037,4.61e-12,32;CL:0000837,4.61e-12,32;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0002194,7.64e-09,4;CL:0000766,7.64e-09,4;CL:0000234,7.64e-09,4;CL:0000576,7.64e-09,4;CL:0000235,7.64e-09,4;CL:0000864,7.64e-09,4;CL:0002009,7.64e-09,4;CL:0000040,7.64e-09,4;CL:0000559,7.64e-09,4;CL:0002320,2.86e-08,46;CL:0000134,2.86e-08,46;CL:0000219,5.61e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.38e-14!70;UBERON:0002193!3.71e-11!48;UBERON:0002371!8.40e-11!16;UBERON:0002390!8.89e-10!45;UBERON:0003061!8.89e-10!45;UBERON:0001474!1.10e-09!22;UBERON:0004765!1.10e-09!22;UBERON:0001434!1.10e-09!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-18,16;UBERON:0001474,5.09e-13,22;UBERON:0004765,5.09e-13,22;UBERON:0001434,5.09e-13,22;UBERON:0002193,6.46e-13,48;UBERON:0002405,6.46e-13,48;UBERON:0002390,7.18e-11,45;UBERON:0003061,7.18e-11,45;UBERON:0000029,1.73e-09,1;UBERON:0001097,1.73e-09,1;UBERON:0003968,1.73e-09,1;UBERON:0001467,1.73e-09,1;UBERON:0002204,6.81e-09,32;UBERON:0002384,2.86e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,2.83465374345756,0.699561878128147,7.72882305127682,7.95263714913285,5.09267582157636,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2615215149076,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50919862576798,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658650345873152,0.268412837520744,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.889357881261447,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,3.2465467351592,0,0,0.565105371014073,0.683471138605126,1.60144721244566,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Gm6377 | |||
}} |
Revision as of 22:43, 5 August 2015
Short description: | p3@Gm6377 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm6377_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000060013, ENSMUST00000139259, NM_001037917, uc009ucu.2_5end |
EntrezGene: | 622976 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.25e-22 | 13 |
megakaryocyte progenitor cell | 5.69e-22 | 6 |
megakaryocyte | 5.69e-22 | 6 |
myeloid cell | 6.06e-18 | 16 |
bone marrow macrophage | 9.93e-17 | 2 |
hematopoietic lineage restricted progenitor cell | 1.56e-15 | 25 |
common myeloid progenitor | 4.27e-15 | 19 |
megakaryocyte-erythroid progenitor cell | 8.80e-15 | 9 |
hematopoietic cell | 4.61e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.61e-12 | 32 |
hematopoietic stem cell | 4.61e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.61e-12 | 32 |
lymphocyte of B lineage | 9.82e-10 | 1 |
B cell | 9.82e-10 | 1 |
pro-B cell | 9.82e-10 | 1 |
monopoietic cell | 7.64e-09 | 4 |
myeloid leukocyte | 7.64e-09 | 4 |
phagocyte | 7.64e-09 | 4 |
monocyte | 7.64e-09 | 4 |
macrophage | 7.64e-09 | 4 |
tissue-resident macrophage | 7.64e-09 | 4 |
macrophage dendritic cell progenitor | 7.64e-09 | 4 |
monoblast | 7.64e-09 | 4 |
promonocyte | 7.64e-09 | 4 |
connective tissue cell | 2.86e-08 | 46 |
mesenchymal cell | 2.86e-08 | 46 |
motile cell | 5.61e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.06e-18 | 16 |
bone element | 5.09e-13 | 22 |
skeletal element | 5.09e-13 | 22 |
skeletal system | 5.09e-13 | 22 |
hemolymphoid system | 6.46e-13 | 48 |
immune system | 6.46e-13 | 48 |
hematopoietic system | 7.18e-11 | 45 |
blood island | 7.18e-11 | 45 |
lymph node | 1.73e-09 | 1 |
axillary lymph node | 1.73e-09 | 1 |
peripheral lymph node | 1.73e-09 | 1 |
shoulder | 1.73e-09 | 1 |
musculoskeletal system | 6.81e-09 | 32 |
connective tissue | 2.86e-08 | 46 |