FFCP PHASE1:Mm9::chr13:37870253..37870272,+: Difference between revisions
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{{FFCP|EntrezGene=68750|HGNC=|MCL_coexpression_id=67|UniProt=B8JJE5|association_with_transcript=0bp_to_ENSMUST00000122842_5end|description=CAGE_peak_13_at_Rreb1_5end|id=chr13:37870253..37870272,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,3.39e-08,4;CL:0000766,3.39e-08,4;CL:0000234,3.39e-08,4;CL:0000576,3.39e-08,4;CL:0000235,3.39e-08,4;CL:0000864,3.39e-08,4;CL:0002009,3.39e-08,4;CL:0000040,3.39e-08,4;CL:0000559,3.39e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.80e-07,48;UBERON:0002405,1.80e-07,48;UBERON:0002390,2.79e-07,45;UBERON:0003061,2.79e-07,45|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0.42438965179803,0.510259740906419,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.831173226792462,0,2.09265815368454,0,0,0,2.04913645487534,0.971020706062307,0.125896817975577,0,0.367093504323363,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,5.39939830368839,4.94433181283487,4.9733608046227,2.39680088414724,2.30530983192933,0,0.135005938331691,0,0,0.883474163806454,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.638436690425939,0.614426133024974,0,0.182975287204819,0,0.558365998002762,0.56276261003168,1.06958773443767,0.589257170947335,0.854230084794618,0.186399445825301,0,0,2.02905142091174,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0.461230994512117,0,0.23517741427141,0.251333182659351,1.23597483867187,0.578397427679647,2.65383165584962,0.970601099684455,0.662524555381181,1.45462575940567,3.72783522436244,0.878342391034642,0.209446706813455,0,0.11981512450592,0,0.508280908292259,1.04853447583376,0.915001205637253,0,0.521472960576829,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,2.73574412652416,0.520481771850815,0.459804208866946,0.900310649026746,0.753524089178575,1.97305847538851,1.15302348256365,1.49922759295566,0.776110112217047,0,0.378212160335639,0.527853372491847,0.219195732427575,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.822799249567402,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0.939444931322602,1.05144974282064,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,1.25667604400135,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.420814919341911,0.252946148497029,0,0.31399745568275,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,1.01430060694251,0.964708639009667,0.25462585178142,0.575392274901621,0.486405680325106,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,1.26289438973556,0.358794827043824,0,0.184753190166605,0,0.488894929326078,0.678980343100753,1.64283173801951,1.00503754465089,0,0.975668239288994,0.788175720530955,0.221464689648775,0.637819074629948,0.81931657357869,0.863424909329478,1.01254341007058,12.0633027151418,3.26343410291226,0.983528546038072,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0.646270193198397,0,0.222798674082394,0,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,2.10837217149998,1.03135543248187,0.680879211507576,0.720244376125241,0.388076051348264,0.857348140126369,0.886701168211368,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0.882113592219848,0.98931751764888,0.807322133479528,0.361877549568935,0.596861720015682,0.492422699235184,0.874442509889552,0.556275906031529,0.170870880797853,0.619160603889667,1.11116716421827,0.753473828018764,0.410082683163076,0.457556346413045,0.509935289981566,1.39951452323658,0.829199842826543,0,0,0.609958401380546,0.540026704109006,1.46361807210128,0.218362563746178,1.07891477107857,1.40510874733071,1.04702376793612,0.518459893167171,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.13020438484395,0.209718688851422,0,0.288030006257865,2.21207784439725,0.202725215290164,0.205421914329655,0.649604114888975,0.358053391334963,0.993406773906324,1.44234539423963,1.18151621739662,1.71642964911851,2.2862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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68750 | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B8JJE5 | |||
|association_with_transcript=0bp_to_ENSMUST00000122842_5end | |||
|cluster_id=chr13:37870253..37870272,+ | |||
|description=CAGE_peak_13_at_Rreb1_5end | |||
|id=chr13:37870253..37870272,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.39e-08,4;CL:0000766,3.39e-08,4;CL:0000234,3.39e-08,4;CL:0000576,3.39e-08,4;CL:0000235,3.39e-08,4;CL:0000864,3.39e-08,4;CL:0002009,3.39e-08,4;CL:0000040,3.39e-08,4;CL:0000559,3.39e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.80e-07,48;UBERON:0002405,1.80e-07,48;UBERON:0002390,2.79e-07,45;UBERON:0003061,2.79e-07,45 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0.42438965179803,0.510259740906419,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.831173226792462,0,2.09265815368454,0,0,0,2.04913645487534,0.971020706062307,0.125896817975577,0,0.367093504323363,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,5.39939830368839,4.94433181283487,4.9733608046227,2.39680088414724,2.30530983192933,0,0.135005938331691,0,0,0.883474163806454,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.638436690425939,0.614426133024974,0,0.182975287204819,0,0.558365998002762,0.56276261003168,1.06958773443767,0.589257170947335,0.854230084794618,0.186399445825301,0,0,2.02905142091174,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0.461230994512117,0,0.23517741427141,0.251333182659351,1.23597483867187,0.578397427679647,2.65383165584962,0.970601099684455,0.662524555381181,1.45462575940567,3.72783522436244,0.878342391034642,0.209446706813455,0,0.11981512450592,0,0.508280908292259,1.04853447583376,0.915001205637253,0,0.521472960576829,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,2.73574412652416,0.520481771850815,0.459804208866946,0.900310649026746,0.753524089178575,1.97305847538851,1.15302348256365,1.49922759295566,0.776110112217047,0,0.378212160335639,0.527853372491847,0.219195732427575,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.822799249567402,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0.939444931322602,1.05144974282064,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,1.25667604400135,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.420814919341911,0.252946148497029,0,0.31399745568275,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,1.01430060694251,0.964708639009667,0.25462585178142,0.575392274901621,0.486405680325106,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,1.26289438973556,0.358794827043824,0,0.184753190166605,0,0.488894929326078,0.678980343100753,1.64283173801951,1.00503754465089,0,0.975668239288994,0.788175720530955,0.221464689648775,0.637819074629948,0.81931657357869,0.863424909329478,1.01254341007058,12.0633027151418,3.26343410291226,0.983528546038072,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0.646270193198397,0,0.222798674082394,0,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,2.10837217149998,1.03135543248187,0.680879211507576,0.720244376125241,0.388076051348264,0.857348140126369,0.886701168211368,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0.882113592219848,0.98931751764888,0.807322133479528,0.361877549568935,0.596861720015682,0.492422699235184,0.874442509889552,0.556275906031529,0.170870880797853,0.619160603889667,1.11116716421827,0.753473828018764,0.410082683163076,0.457556346413045,0.509935289981566,1.39951452323658,0.829199842826543,0,0,0.609958401380546,0.540026704109006,1.46361807210128,0.218362563746178,1.07891477107857,1.40510874733071,1.04702376793612,0.518459893167171,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.13020438484395,0.209718688851422,0,0.288030006257865,2.21207784439725,0.202725215290164,0.205421914329655,0.649604114888975,0.358053391334963,0.993406773906324,1.44234539423963,1.18151621739662,1.71642964911851,2.28620419965,1.91569751759997,1.75424185331554,1.82802499116626,1.8700304349051,1.13365191807606,0.887943813496259,0.179427713218951,0,0.386379188064381,0.750729901804728,0.36630324853453,1.07184189539533,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,0,0.51776031175182,0.207574695168353,0,0.512200817262403,0.972426868273176,0.419226325255965,0.183843508450014,1.33348036680969,0.412070114477788,0,0,0.50695859978048,0.754505365544305,0.280924522409647,0.576226371643824,0.459483751644906,0,0.695305955669133,0.192909220463705,0.412085900803307,0.441596760403192,1.02860775715625,0.53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| |||
|short_description=p13@Rreb1 | |||
}} |
Revision as of 22:53, 5 August 2015
Short description: | p13@Rreb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Rreb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 0bp_to_ENSMUST00000122842_5end |
EntrezGene: | 68750 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.39e-08 | 4 |
myeloid leukocyte | 3.39e-08 | 4 |
phagocyte | 3.39e-08 | 4 |
monocyte | 3.39e-08 | 4 |
macrophage | 3.39e-08 | 4 |
tissue-resident macrophage | 3.39e-08 | 4 |
macrophage dendritic cell progenitor | 3.39e-08 | 4 |
monoblast | 3.39e-08 | 4 |
promonocyte | 3.39e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.80e-07 | 48 |
immune system | 1.80e-07 | 48 |
hematopoietic system | 2.79e-07 | 45 |
blood island | 2.79e-07 | 45 |