Personal tools

FFCP PHASE1:Mm9::chrX:111588092..111588108,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=237010|HGNC=|MCL_coexpression_id=20|UniProt=Q8BUX1,Q8BLJ6,Q3TSV2|association_with_transcript=-20bp_to_ENSMUST00000113370,NM_172781,uc009udu.1,uc009udv.1,uc009udw.1,uc009udx.1_5end|description=CAGE_peak_6_at_Klhl4_5end|id=chrX:111588092..111588108,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,2.42e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!2.49e-08!114;UBERON:0007100!5.10e-08!18;UBERON:0000948!5.10e-08!18;UBERON:0005498!5.10e-08!18;UBERON:0004140!5.10e-08!18;UBERON:0009881!5.10e-08!18;UBERON:0004141!5.10e-08!18;UBERON:0003084!5.10e-08!18;UBERON:0007005!5.10e-08!18;UBERON:0004139!5.10e-08!18;UBERON:0004291!5.10e-08!18;UBERON:0004111!2.32e-07!122;UBERON:0000955!6.94e-07!50;UBERON:0006238!6.94e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.22e-15,92;UBERON:0007100,5.21e-13,18;UBERON:0000948,5.21e-13,18;UBERON:0005498,5.21e-13,18;UBERON:0004140,5.21e-13,18;UBERON:0009881,5.21e-13,18;UBERON:0004141,5.21e-13,18;UBERON:0003084,5.21e-13,18;UBERON:0007005,5.21e-13,18;UBERON:0004139,5.21e-13,18;UBERON:0004291,5.21e-13,18;UBERON:0000073,5.00e-12,54;UBERON:0000025,1.77e-11,114;UBERON:0002616,2.60e-11,46;UBERON:0001049,3.66e-11,52;UBERON:0005068,3.66e-11,52;UBERON:0006241,3.66e-11,52;UBERON:0007135,3.66e-11,52;UBERON:0000955,5.39e-11,47;UBERON:0006238,5.39e-11,47;UBERON:0002950,6.98e-11,4;UBERON:0001891,6.98e-11,4;UBERON:0009616,6.98e-11,4;UBERON:0010286,6.98e-11,4;UBERON:0004111,2.44e-10,122;UBERON:0004535,9.34e-10,23;UBERON:0001009,9.34e-10,23;UBERON:0001017,4.57e-09,73;UBERON:0001016,1.03e-08,75;UBERON:0002346,2.32e-08,64;UBERON:0003075,2.32e-08,64;UBERON:0007284,2.32e-08,64;UBERON:0002038,2.42e-08,3;UBERON:0009663,2.42e-08,3;UBERON:0009661,2.42e-08,3;UBERON:0000125,2.42e-08,3;UBERON:0002308,2.42e-08,3;UBERON:0003103,1.13e-07,43;UBERON:0004733,1.93e-07,6;UBERON:0004732,1.93e-07,6;UBERON:0002028,1.93e-07,6;UBERON:0007277,1.93e-07,6;UBERON:0003080,4.35e-07,40;UBERON:0001896,5.19e-07,2;UBERON:0002298,5.19e-07,2;UBERON:0005290,5.19e-07,2;UBERON:0010096,5.19e-07,2;UBERON:0010371,7.09e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,2.17068474744819,4.30098293117482,0,0,0,1.67509799400829,1.68828783009504,3.51435969886663,0,0,0.186399445825301,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.230615497256059,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,4.6435098215495,2.74500361691176,0,1.56441888173049,1.02286182932132,5.81806524766768,4.70499662896497,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,1.79130840136644,0,0,0,3.93538967817454,4.69052119962192,3.78130329068131,4.7348947117042,3.14822770795846,2.77680803197281,1.86027155800326,1.60964040839772,1.63471479314037,1.31647879930784,0.985004784474571,0.324275238183423,0.730999937126662,0.439100230582101,0.402619256281115,2.73376933133365,0.102904612379284,0,0,1.49301775374664,0.696710015581316,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0.502670417600539,0.795825888164603,0,0.898819408654221,0.216138049874694,0,0.569003702859245,1.5994791765362,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0.83422552858047,0.589676985339609,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.505157755894224,0,0,0.184753190166605,0.947457058852424,0.325929952884052,0.848725428875941,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0,0,0,0,0.144649058581512,0,0,0,0,6.58257418949947,9.37693492737625,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0,0,0.161464426695906,0.241251699712623,0,0,0,10.198391610578,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,1.26534397432454,0.406638934253697,0.432021363287205,0.836353184057875,0.218362563746178,0.404593039154462,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0.513554785824136,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.214368379079066,0,2.25900737046827,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,1.81256963593682,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.564656282491984,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.57386499620653,0,0.463735671240843|short_description=p6@Klhl4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:237010
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=uniprot:Q8BUX1,uniprot:Q8BLJ6,uniprot:Q3TSV2
|association_with_transcript=-20bp_to_ENSMUST00000113370,NM_172781,uc009udu.1,uc009udv.1,uc009udw.1,uc009udx.1_5end
|cluster_id=chrX:111588092..111588108,+
|description=CAGE_peak_6_at_Klhl4_5end
|id=chrX:111588092..111588108,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,2.42e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.49e-08!114;UBERON:0007100!5.10e-08!18;UBERON:0000948!5.10e-08!18;UBERON:0005498!5.10e-08!18;UBERON:0004140!5.10e-08!18;UBERON:0009881!5.10e-08!18;UBERON:0004141!5.10e-08!18;UBERON:0003084!5.10e-08!18;UBERON:0007005!5.10e-08!18;UBERON:0004139!5.10e-08!18;UBERON:0004291!5.10e-08!18;UBERON:0004111!2.32e-07!122;UBERON:0000955!6.94e-07!50;UBERON:0006238!6.94e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.22e-15,92;UBERON:0007100,5.21e-13,18;UBERON:0000948,5.21e-13,18;UBERON:0005498,5.21e-13,18;UBERON:0004140,5.21e-13,18;UBERON:0009881,5.21e-13,18;UBERON:0004141,5.21e-13,18;UBERON:0003084,5.21e-13,18;UBERON:0007005,5.21e-13,18;UBERON:0004139,5.21e-13,18;UBERON:0004291,5.21e-13,18;UBERON:0000073,5.00e-12,54;UBERON:0000025,1.77e-11,114;UBERON:0002616,2.60e-11,46;UBERON:0001049,3.66e-11,52;UBERON:0005068,3.66e-11,52;UBERON:0006241,3.66e-11,52;UBERON:0007135,3.66e-11,52;UBERON:0000955,5.39e-11,47;UBERON:0006238,5.39e-11,47;UBERON:0002950,6.98e-11,4;UBERON:0001891,6.98e-11,4;UBERON:0009616,6.98e-11,4;UBERON:0010286,6.98e-11,4;UBERON:0004111,2.44e-10,122;UBERON:0004535,9.34e-10,23;UBERON:0001009,9.34e-10,23;UBERON:0001017,4.57e-09,73;UBERON:0001016,1.03e-08,75;UBERON:0002346,2.32e-08,64;UBERON:0003075,2.32e-08,64;UBERON:0007284,2.32e-08,64;UBERON:0002038,2.42e-08,3;UBERON:0009663,2.42e-08,3;UBERON:0009661,2.42e-08,3;UBERON:0000125,2.42e-08,3;UBERON:0002308,2.42e-08,3;UBERON:0003103,1.13e-07,43;UBERON:0004733,1.93e-07,6;UBERON:0004732,1.93e-07,6;UBERON:0002028,1.93e-07,6;UBERON:0007277,1.93e-07,6;UBERON:0003080,4.35e-07,40;UBERON:0001896,5.19e-07,2;UBERON:0002298,5.19e-07,2;UBERON:0005290,5.19e-07,2;UBERON:0010096,5.19e-07,2;UBERON:0010371,7.09e-07,73
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,2.17068474744819,4.30098293117482,0,0,0,1.67509799400829,1.68828783009504,3.51435969886663,0,0,0.186399445825301,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.230615497256059,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,4.6435098215495,2.74500361691176,0,1.56441888173049,1.02286182932132,5.81806524766768,4.70499662896497,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,1.79130840136644,0,0,0,3.93538967817454,4.69052119962192,3.78130329068131,4.7348947117042,3.14822770795846,2.77680803197281,1.86027155800326,1.60964040839772,1.63471479314037,1.31647879930784,0.985004784474571,0.324275238183423,0.730999937126662,0.439100230582101,0.402619256281115,2.73376933133365,0.102904612379284,0,0,1.49301775374664,0.696710015581316,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0.329397909448022,0.502670417600539,0.795825888164603,0,0.898819408654221,0.216138049874694,0,0.569003702859245,1.5994791765362,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0.83422552858047,0.589676985339609,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.505157755894224,0,0,0.184753190166605,0.947457058852424,0.325929952884052,0.848725428875941,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0,0,0,0,0.144649058581512,0,0,0,0,6.58257418949947,9.37693492737625,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0,0.428674070063185,0.532020700926821,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0,0,0.161464426695906,0.241251699712623,0,0,0,10.198391610578,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,1.26534397432454,0.406638934253697,0.432021363287205,0.836353184057875,0.218362563746178,0.404593039154462,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0.513554785824136,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.214368379079066,0,2.25900737046827,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,1.81256963593682,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0.564656282491984,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.57386499620653,0,0.463735671240843
|short_description=p6@Klhl4
}}

Revision as of 23:04, 5 August 2015

Short description:p6@Klhl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Klhl4_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -20bp_to_ENSMUST00000113370, NM_172781, uc009udu.1, uc009udv.1, uc009udw.1, uc009udx.1_5end
EntrezGene:237010
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Klhl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra2.42e-083

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.22e-1592
primary circulatory organ5.21e-1318
heart5.21e-1318
primitive heart tube5.21e-1318
primary heart field5.21e-1318
anterior lateral plate mesoderm5.21e-1318
heart tube5.21e-1318
heart primordium5.21e-1318
cardiac mesoderm5.21e-1318
cardiogenic plate5.21e-1318
heart rudiment5.21e-1318
regional part of nervous system5.00e-1254
tube1.77e-11114
regional part of brain2.60e-1146
neural tube3.66e-1152
neural rod3.66e-1152
future spinal cord3.66e-1152
neural keel3.66e-1152
brain5.39e-1147
future brain5.39e-1147
regional part of midbrain6.98e-114
midbrain6.98e-114
presumptive midbrain6.98e-114
midbrain neural tube6.98e-114
anatomical conduit2.44e-10122
cardiovascular system9.34e-1023
circulatory system9.34e-1023
central nervous system4.57e-0973
nervous system1.03e-0875
neurectoderm2.32e-0864
neural plate2.32e-0864
presumptive neural plate2.32e-0864
substantia nigra2.42e-083
telencephalic nucleus2.42e-083
midbrain nucleus2.42e-083
neural nucleus2.42e-083
nucleus of brain2.42e-083
compound organ1.13e-0743
segmental subdivision of hindbrain1.93e-076
segmental subdivision of nervous system1.93e-076
hindbrain1.93e-076
presumptive hindbrain1.93e-076
anterior neural tube4.35e-0740
medulla oblongata5.19e-072
brainstem5.19e-072
myelencephalon5.19e-072
future myelencephalon5.19e-072
ecto-epithelium7.09e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:111588092..111588108,%2B&oldid=3951566"