FFCP PHASE1:Mm9::chr18:61173755..61173777,-: Difference between revisions
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{{FFCP|EntrezGene=240332|HGNC=|MCL_coexpression_id=1|UniProt=Q6PGE7|association_with_transcript=75bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end|description=CAGE_peak_4_at_Slc6a7_5end|id=chr18:61173755..61173777,-|ontology_enrichment_celltype=CL:0000117!1.01e-11!23;CL:0000337!1.01e-11!23;CL:0000540!4.31e-10!33;CL:0000047!4.31e-10!33;CL:0000031!4.31e-10!33;CL:0000404!4.31e-10!33;CL:0000393!3.08e-08!39;CL:0000211!3.08e-08!39;CL:0002319!5.56e-08!43;CL:0000221!1.26e-07!44;CL:0000133!1.26e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.41e-17,23;CL:0000337,9.41e-17,23;CL:0000540,8.00e-11,33;CL:0000047,8.00e-11,33;CL:0000031,8.00e-11,33;CL:0000404,8.00e-11,33;CL:0002614,2.01e-09,3;CL:0002610,7.80e-09,3;CL:0000393,9.79e-09,39;CL:0000211,9.79e-09,39;CL:0002319,1.13e-07,43;CL:0000221,1.95e-07,44;CL:0000133,1.95e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.59e-22!75;UBERON:0001016!1.59e-22!75;UBERON:0001017!6.96e-22!73;UBERON:0005743!6.96e-22!73;UBERON:0001049!2.89e-18!52;UBERON:0005068!2.89e-18!52;UBERON:0006241!2.89e-18!52;UBERON:0007135!2.89e-18!52;UBERON:0002020!5.13e-18!34;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!5.41e-16!49;UBERON:0004121!6.53e-15!102;UBERON:0000924!6.53e-15!102;UBERON:0006601!6.53e-15!102;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0003080!6.50e-13!40;UBERON:0000033!2.60e-12!63;UBERON:0002780!4.50e-12!39;UBERON:0001890!4.50e-12!39;UBERON:0006240!4.50e-12!39;UBERON:0002346!2.85e-11!71;UBERON:0003075!2.85e-11!71;UBERON:0007284!2.85e-11!71;UBERON:0002021!5.88e-11!10;UBERON:0000411!5.88e-11!10;UBERON:0001950!5.88e-11!10;UBERON:0003056!2.86e-10!49;UBERON:0002619!1.09e-08!17;UBERON:0002420!3.44e-08!8;UBERON:0007245!3.44e-08!8;UBERON:0010009!3.44e-08!8;UBERON:0010011!3.44e-08!8;UBERON:0000454!3.44e-08!8;UBERON:0000956!1.47e-07!21;UBERON:0001869!1.47e-07!21;UBERON:0000203!1.47e-07!21;UBERON:0002298!1.79e-07!6;UBERON:0007811!6.65e-07!86;UBERON:0002240!8.75e-07!6;UBERON:0005174!8.75e-07!6;UBERON:0001137!8.75e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.54e-36,54;UBERON:0001049,1.52e-31,52;UBERON:0005068,1.52e-31,52;UBERON:0006241,1.52e-31,52;UBERON:0007135,1.52e-31,52;UBERON:0001017,3.48e-31,73;UBERON:0001016,3.48e-30,75;UBERON:0002020,4.70e-30,34;UBERON:0002021,4.41e-25,10;UBERON:0000411,4.41e-25,10;UBERON:0001950,4.41e-25,10;UBERON:0000955,5.54e-25,47;UBERON:0006238,5.54e-25,47;UBERON:0002346,1.54e-24,64;UBERON:0003075,1.54e-24,64;UBERON:0007284,1.54e-24,64;UBERON:0002616,3.89e-23,46;UBERON:0003528,6.89e-23,29;UBERON:0002791,6.89e-23,29;UBERON:0001893,6.89e-23,29;UBERON:0004121,1.71e-22,95;UBERON:0000924,1.71e-22,95;UBERON:0006601,1.71e-22,95;UBERON:0003080,3.17e-22,40;UBERON:0010371,8.62e-21,73;UBERON:0002780,2.37e-20,39;UBERON:0001890,2.37e-20,39;UBERON:0006240,2.37e-20,39;UBERON:0003056,2.69e-17,49;UBERON:0002619,9.52e-17,17;UBERON:0000956,6.64e-16,21;UBERON:0001869,6.64e-16,21;UBERON:0000203,6.64e-16,21;UBERON:0010314,2.77e-15,92;UBERON:0002950,6.15e-12,4;UBERON:0001891,6.15e-12,4;UBERON:0009616,6.15e-12,4;UBERON:0010286,6.15e-12,4;UBERON:0000025,3.36e-11,114;UBERON:0002240,1.26e-10,6;UBERON:0005174,1.26e-10,6;UBERON:0001137,1.26e-10,6;UBERON:0004111,4.43e-10,122;UBERON:0003076,1.16e-09,12;UBERON:0003057,1.16e-09,12;UBERON:0002038,2.01e-09,3;UBERON:0009663,2.01e-09,3;UBERON:0009661,2.01e-09,3;UBERON:0000125,2.01e-09,3;UBERON:0002308,2.01e-09,3;UBERON:0011216,2.66e-09,194;UBERON:0004684,7.80e-09,3;UBERON:0002275,7.80e-09,3;UBERON:0001948,1.09e-08,5;UBERON:0002315,1.09e-08,5;UBERON:0002420,3.92e-08,8;UBERON:0007245,3.92e-08,8;UBERON:0010009,3.92e-08,8;UBERON:0010011,3.92e-08,8;UBERON:0000454,3.92e-08,8|phase1_expression=0,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0,0,0,4.85606673486466,1.98781686856452,0.367472397644862,0,0,1.10115880999389,7.53355294702608,5.83704826373725,0.527545150920775,1.00636407962651,1.56274011167028,4.18774498502071,6.75315132038016,5.04234217663473,3.53554302568401,2.56269025438385,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0.510914110417183,0,0,0,4.34392854273986,0.915001205637253,0.628271760564322,5.04090528557602,3.83573185995496,2.0778804455956,2.43361894601636,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.411618449517138,0,0,0,0,0.128867461322093,0,1.11189021922435,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.56880943980467,2.34423373184406,0,0,0,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.8244312647074,0,0,0,0,1.7488850197791,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,2.25900737046827,2.76195141904306,3.43737308063638,2.92150409984269,2.05524755931193,2.2661816921691,3.37511250115903,4.05289082901798,4.53142408984205,8.28416498802912,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.505394423527595,0.25347929989024,0,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0,0|short_description=p4@Slc6a7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240332 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PGE7 | |||
|association_with_transcript=75bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end | |||
|cluster_id=chr18:61173755..61173777,- | |||
|description=CAGE_peak_4_at_Slc6a7_5end | |||
|id=chr18:61173755..61173777,- | |||
|ontology_enrichment_celltype=CL:0000117!1.01e-11!23;CL:0000337!1.01e-11!23;CL:0000540!4.31e-10!33;CL:0000047!4.31e-10!33;CL:0000031!4.31e-10!33;CL:0000404!4.31e-10!33;CL:0000393!3.08e-08!39;CL:0000211!3.08e-08!39;CL:0002319!5.56e-08!43;CL:0000221!1.26e-07!44;CL:0000133!1.26e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.41e-17,23;CL:0000337,9.41e-17,23;CL:0000540,8.00e-11,33;CL:0000047,8.00e-11,33;CL:0000031,8.00e-11,33;CL:0000404,8.00e-11,33;CL:0002614,2.01e-09,3;CL:0002610,7.80e-09,3;CL:0000393,9.79e-09,39;CL:0000211,9.79e-09,39;CL:0002319,1.13e-07,43;CL:0000221,1.95e-07,44;CL:0000133,1.95e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-22!75;UBERON:0001016!1.59e-22!75;UBERON:0001017!6.96e-22!73;UBERON:0005743!6.96e-22!73;UBERON:0001049!2.89e-18!52;UBERON:0005068!2.89e-18!52;UBERON:0006241!2.89e-18!52;UBERON:0007135!2.89e-18!52;UBERON:0002020!5.13e-18!34;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!5.41e-16!49;UBERON:0004121!6.53e-15!102;UBERON:0000924!6.53e-15!102;UBERON:0006601!6.53e-15!102;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0003080!6.50e-13!40;UBERON:0000033!2.60e-12!63;UBERON:0002780!4.50e-12!39;UBERON:0001890!4.50e-12!39;UBERON:0006240!4.50e-12!39;UBERON:0002346!2.85e-11!71;UBERON:0003075!2.85e-11!71;UBERON:0007284!2.85e-11!71;UBERON:0002021!5.88e-11!10;UBERON:0000411!5.88e-11!10;UBERON:0001950!5.88e-11!10;UBERON:0003056!2.86e-10!49;UBERON:0002619!1.09e-08!17;UBERON:0002420!3.44e-08!8;UBERON:0007245!3.44e-08!8;UBERON:0010009!3.44e-08!8;UBERON:0010011!3.44e-08!8;UBERON:0000454!3.44e-08!8;UBERON:0000956!1.47e-07!21;UBERON:0001869!1.47e-07!21;UBERON:0000203!1.47e-07!21;UBERON:0002298!1.79e-07!6;UBERON:0007811!6.65e-07!86;UBERON:0002240!8.75e-07!6;UBERON:0005174!8.75e-07!6;UBERON:0001137!8.75e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.54e-36,54;UBERON:0001049,1.52e-31,52;UBERON:0005068,1.52e-31,52;UBERON:0006241,1.52e-31,52;UBERON:0007135,1.52e-31,52;UBERON:0001017,3.48e-31,73;UBERON:0001016,3.48e-30,75;UBERON:0002020,4.70e-30,34;UBERON:0002021,4.41e-25,10;UBERON:0000411,4.41e-25,10;UBERON:0001950,4.41e-25,10;UBERON:0000955,5.54e-25,47;UBERON:0006238,5.54e-25,47;UBERON:0002346,1.54e-24,64;UBERON:0003075,1.54e-24,64;UBERON:0007284,1.54e-24,64;UBERON:0002616,3.89e-23,46;UBERON:0003528,6.89e-23,29;UBERON:0002791,6.89e-23,29;UBERON:0001893,6.89e-23,29;UBERON:0004121,1.71e-22,95;UBERON:0000924,1.71e-22,95;UBERON:0006601,1.71e-22,95;UBERON:0003080,3.17e-22,40;UBERON:0010371,8.62e-21,73;UBERON:0002780,2.37e-20,39;UBERON:0001890,2.37e-20,39;UBERON:0006240,2.37e-20,39;UBERON:0003056,2.69e-17,49;UBERON:0002619,9.52e-17,17;UBERON:0000956,6.64e-16,21;UBERON:0001869,6.64e-16,21;UBERON:0000203,6.64e-16,21;UBERON:0010314,2.77e-15,92;UBERON:0002950,6.15e-12,4;UBERON:0001891,6.15e-12,4;UBERON:0009616,6.15e-12,4;UBERON:0010286,6.15e-12,4;UBERON:0000025,3.36e-11,114;UBERON:0002240,1.26e-10,6;UBERON:0005174,1.26e-10,6;UBERON:0001137,1.26e-10,6;UBERON:0004111,4.43e-10,122;UBERON:0003076,1.16e-09,12;UBERON:0003057,1.16e-09,12;UBERON:0002038,2.01e-09,3;UBERON:0009663,2.01e-09,3;UBERON:0009661,2.01e-09,3;UBERON:0000125,2.01e-09,3;UBERON:0002308,2.01e-09,3;UBERON:0011216,2.66e-09,194;UBERON:0004684,7.80e-09,3;UBERON:0002275,7.80e-09,3;UBERON:0001948,1.09e-08,5;UBERON:0002315,1.09e-08,5;UBERON:0002420,3.92e-08,8;UBERON:0007245,3.92e-08,8;UBERON:0010009,3.92e-08,8;UBERON:0010011,3.92e-08,8;UBERON:0000454,3.92e-08,8 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0,0,0,4.85606673486466,1.98781686856452,0.367472397644862,0,0,1.10115880999389,7.53355294702608,5.83704826373725,0.527545150920775,1.00636407962651,1.56274011167028,4.18774498502071,6.75315132038016,5.04234217663473,3.53554302568401,2.56269025438385,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0.510914110417183,0,0,0,4.34392854273986,0.915001205637253,0.628271760564322,5.04090528557602,3.83573185995496,2.0778804455956,2.43361894601636,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.411618449517138,0,0,0,0,0.128867461322093,0,1.11189021922435,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.56880943980467,2.34423373184406,0,0,0,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.8244312647074,0,0,0,0,1.7488850197791,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,2.25900737046827,2.76195141904306,3.43737308063638,2.92150409984269,2.05524755931193,2.2661816921691,3.37511250115903,4.05289082901798,4.53142408984205,8.28416498802912,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.505394423527595,0.25347929989024,0,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p4@Slc6a7 | |||
}} |
Revision as of 23:20, 5 August 2015
Short description: | p4@Slc6a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 75bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end |
EntrezGene: | 240332 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.41e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.41e-17 | 23 |
neuron | 8.00e-11 | 33 |
neuronal stem cell | 8.00e-11 | 33 |
neuroblast | 8.00e-11 | 33 |
electrically signaling cell | 8.00e-11 | 33 |
neuron of the substantia nigra | 2.01e-09 | 3 |
raphe nuclei neuron | 7.80e-09 | 3 |
electrically responsive cell | 9.79e-09 | 39 |
electrically active cell | 9.79e-09 | 39 |
neural cell | 1.13e-07 | 43 |
ectodermal cell | 1.95e-07 | 44 |
neurectodermal cell | 1.95e-07 | 44 |