FFCP PHASE1:Mm9::chr6:54276846..54276882,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=78004|HGNC=|MCL_coexpression_id=12|UniProt=Q9D1T5,A2RT92|association_with_transcript=-123bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end|description=CAGE_peak_2_at_Prr15_5end|id=chr6:54276846..54276882,+|ontology_enrichment_celltype=CL:0002563!7.30e-07!9;CL:0002251!7.30e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9;CL:0000075,2.12e-07,7;CL:0000239,9.52e-07,6;CL:0000677,9.52e-07,6;CL:0000584,9.52e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.35e-13!59;UBERON:0000160!8.18e-12!43;UBERON:0000344!7.63e-11!15;UBERON:0001242!1.62e-09!13;UBERON:0000060!1.62e-09!13;UBERON:0001262!1.62e-09!13;UBERON:0004786!1.62e-09!13;UBERON:0005156!2.52e-08!26;UBERON:0000990!2.52e-08!26;UBERON:0000485!1.04e-07!11;UBERON:0003133!2.47e-07!24;UBERON:0004923!3.10e-07!24;UBERON:0003350!7.30e-07!9;UBERON:0004808!7.30e-07!9;UBERON:0001277!7.30e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.89e-21,31;UBERON:0005409,1.17e-19,47;UBERON:0000344,1.66e-13,15;UBERON:0001242,8.45e-12,13;UBERON:0001262,8.45e-12,13;UBERON:0004786,8.45e-12,13;UBERON:0000485,1.78e-09,11;UBERON:0005156,4.18e-09,26;UBERON:0000990,4.18e-09,26;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0003133,6.98e-08,24;UBERON:0004923,1.14e-07,24;UBERON:0003101,1.70e-07,16;UBERON:0000079,1.70e-07,16;UBERON:0000991,2.59e-07,18;UBERON:0005564,2.59e-07,18;UBERON:0004176,3.26e-07,17;UBERON:0009196,3.26e-07,17;UBERON:0009117,3.26e-07,17;UBERON:0003135,7.90e-07,15|phase1_expression=4.16387002472464,200.660859392633,204.294658485902,111.911758183527,123.721245296748,46.1667997757697,42.5175005883857,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.63634199468316,0,0,63.1970070033956,72.4933328172257,149.87454263402,102.52135508586,101.486950595054,120.474847935341,107.61686540749,52.5501310253072,0,0,0,6.93243887403059,4.98703936075477,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.37863096666592,0,1.44932244350839,0,0,0,0,0,5.47733238513832,0,0,0,10.4224130634744,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,12.1034912502204,0.776813650941515,2.07818994690755,0.693941307064543,0.304465478312141,0.691846491768175,0.753613202763113,0.823120949949934,0.753999547978053,2.47194967734374,0.578397427679647,0,1.29413479957927,0.441683036920787,0.484875253135222,13.0474232852686,0,0,38.8294723917059,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,1.42575109390443,1.49288364732112,6.82351447770922,0.631325567659422,0.130120442962704,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0.517406741478031,0,0,0,0,0.278047249225598,0,0,1.39323986772945,0,0,0,2.89976081549703,3.98694301967864,3.24111710629827,2.60419209143731,3.54175617145327,4.31947916084659,2.32533944750408,3.48755421819505,2.21854150497622,1.97471819896177,0.820837320395476,0.891756905004413,1.16959989940266,0.439100230582101,0.939444931322602,0,0.308713837137853,44.6065357028127,44.1632446328119,0.213288250535234,0.928946687441754,2.31961430379768,6.85723983719365,5.78182913996663,10.0819581839656,33.2170343081158,19.5991756121573,14.5774421104156,12.5342577385925,12.4777015756237,20.6728463990471,23.1267713365923,25.490082976559,1.13800740571849,2.05647322697512,0,4.2766778847516,2.90928730751439,2.87556861550306,3.41477300470989,4.72352473534727,3.61097074035162,3.94870924549762,0,0.333690211432188,0,0.224862112384854,1.42002084971952,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0,0.505157755894224,0,0,2.03228509183265,0.568474235311454,0.651859905768103,0.848725428875941,0.704070744865506,1.34005005953453,0.952174563544055,1.56106918286239,2.20689201748667,1.99318220683897,1.2756381492599,0.81931657357869,1.03610989119537,1.59113964439663,1.50791283939272,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,4.40014264145633,1.6025904330053,2.28041743095006,8.41347627159931,1.32745138339963,0,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,4.39328098385976,0.363533729477506,0.356497378384721,0,0,0,6.12791290356818,2.70091641046965,6.46793418913772,7.71613326113732,4.78818630834139,4.10248280484762,3.62007845324666,6.39376393140658,0.704015124191131,0.847328283455281,18.7449138346718,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.492422699235184,29.1480836629851,0.18542530201051,0,1.857481811669,0.740778109478847,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0.276399947608848,1.90934123603023,0.632671987162271,2.84647253977588,3.02414954301044,4.39085421630384,4.36725127492355,2.42755823492677,2.47960367176008,5.49687478166462,20.8680106999787,3.10669656543463,3.38215763210514,1.04661582230785,1.98550188548517,3.11121901350476,1.93739735216597,2.36538575687089,2.46450201156083,5.33837977860195,9.75191903159111,5.55643477899814,5.76060012515731,0,0.608175645870493,0.513554785824136,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.302899349844443,0.15241361331,0.302478555410522,0.292373642219257,0,0,1.13365191807606,0.443971906748129,0,0.503653849092235,1.35232715822533,9.19644129710792,8.05867146775966,1.50057865355346,7.52358156053045,0,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0.906284817968409,1.55328093525546,0.62272408550506,0.798049746802062,0.170733605754134,0,0.838452650511929,1.47074806760011,2.00022055021454,0.618105171716683,0.320919209591815,1.01078884705519,1.01391719956096,1.50901073108861,0.842773567228942,1.79270426733634,1.03383844120104,2.38146845641537,1.15884325944855,1.54327376370964,0,0.441596760403192,0.685738504770831,0.70990322463735,0.476872379894642,1.30811774969096,1.31753132581463,0.846146078916765,0.914639864363863,1.8414879800649,1.90125759384206,1.68342681497322,0.949080144993393,1.0835493061312,0,0.929621047115796,2.12197272079256,1.49886346762768,1.16965804222704,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843|short_description=p2@Prr15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78004 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D1T5,uniprot:A2RT92 | |||
|association_with_transcript=-123bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end | |||
|cluster_id=chr6:54276846..54276882,+ | |||
|description=CAGE_peak_2_at_Prr15_5end | |||
|id=chr6:54276846..54276882,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.30e-07!9;CL:0002251!7.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9;CL:0000075,2.12e-07,7;CL:0000239,9.52e-07,6;CL:0000677,9.52e-07,6;CL:0000584,9.52e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.35e-13!59;UBERON:0000160!8.18e-12!43;UBERON:0000344!7.63e-11!15;UBERON:0001242!1.62e-09!13;UBERON:0000060!1.62e-09!13;UBERON:0001262!1.62e-09!13;UBERON:0004786!1.62e-09!13;UBERON:0005156!2.52e-08!26;UBERON:0000990!2.52e-08!26;UBERON:0000485!1.04e-07!11;UBERON:0003133!2.47e-07!24;UBERON:0004923!3.10e-07!24;UBERON:0003350!7.30e-07!9;UBERON:0004808!7.30e-07!9;UBERON:0001277!7.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.89e-21,31;UBERON:0005409,1.17e-19,47;UBERON:0000344,1.66e-13,15;UBERON:0001242,8.45e-12,13;UBERON:0001262,8.45e-12,13;UBERON:0004786,8.45e-12,13;UBERON:0000485,1.78e-09,11;UBERON:0005156,4.18e-09,26;UBERON:0000990,4.18e-09,26;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0003133,6.98e-08,24;UBERON:0004923,1.14e-07,24;UBERON:0003101,1.70e-07,16;UBERON:0000079,1.70e-07,16;UBERON:0000991,2.59e-07,18;UBERON:0005564,2.59e-07,18;UBERON:0004176,3.26e-07,17;UBERON:0009196,3.26e-07,17;UBERON:0009117,3.26e-07,17;UBERON:0003135,7.90e-07,15 | |||
|phase1_expression=4.16387002472464,200.660859392633,204.294658485902,111.911758183527,123.721245296748,46.1667997757697,42.5175005883857,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.63634199468316,0,0,63.1970070033956,72.4933328172257,149.87454263402,102.52135508586,101.486950595054,120.474847935341,107.61686540749,52.5501310253072,0,0,0,6.93243887403059,4.98703936075477,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.37863096666592,0,1.44932244350839,0,0,0,0,0,5.47733238513832,0,0,0,10.4224130634744,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,12.1034912502204,0.776813650941515,2.07818994690755,0.693941307064543,0.304465478312141,0.691846491768175,0.753613202763113,0.823120949949934,0.753999547978053,2.47194967734374,0.578397427679647,0,1.29413479957927,0.441683036920787,0.484875253135222,13.0474232852686,0,0,38.8294723917059,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,1.42575109390443,1.49288364732112,6.82351447770922,0.631325567659422,0.130120442962704,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0.281105173679186,0.517406741478031,0,0,0,0,0.278047249225598,0,0,1.39323986772945,0,0,0,2.89976081549703,3.98694301967864,3.24111710629827,2.60419209143731,3.54175617145327,4.31947916084659,2.32533944750408,3.48755421819505,2.21854150497622,1.97471819896177,0.820837320395476,0.891756905004413,1.16959989940266,0.439100230582101,0.939444931322602,0,0.308713837137853,44.6065357028127,44.1632446328119,0.213288250535234,0.928946687441754,2.31961430379768,6.85723983719365,5.78182913996663,10.0819581839656,33.2170343081158,19.5991756121573,14.5774421104156,12.5342577385925,12.4777015756237,20.6728463990471,23.1267713365923,25.490082976559,1.13800740571849,2.05647322697512,0,4.2766778847516,2.90928730751439,2.87556861550306,3.41477300470989,4.72352473534727,3.61097074035162,3.94870924549762,0,0.333690211432188,0,0.224862112384854,1.42002084971952,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0,0.505157755894224,0,0,2.03228509183265,0.568474235311454,0.651859905768103,0.848725428875941,0.704070744865506,1.34005005953453,0.952174563544055,1.56106918286239,2.20689201748667,1.99318220683897,1.2756381492599,0.81931657357869,1.03610989119537,1.59113964439663,1.50791283939272,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,4.40014264145633,1.6025904330053,2.28041743095006,8.41347627159931,1.32745138339963,0,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,4.39328098385976,0.363533729477506,0.356497378384721,0,0,0,6.12791290356818,2.70091641046965,6.46793418913772,7.71613326113732,4.78818630834139,4.10248280484762,3.62007845324666,6.39376393140658,0.704015124191131,0.847328283455281,18.7449138346718,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.492422699235184,29.1480836629851,0.18542530201051,0,1.857481811669,0.740778109478847,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0.276399947608848,1.90934123603023,0.632671987162271,2.84647253977588,3.02414954301044,4.39085421630384,4.36725127492355,2.42755823492677,2.47960367176008,5.49687478166462,20.8680106999787,3.10669656543463,3.38215763210514,1.04661582230785,1.98550188548517,3.11121901350476,1.93739735216597,2.36538575687089,2.46450201156083,5.33837977860195,9.75191903159111,5.55643477899814,5.76060012515731,0,0.608175645870493,0.513554785824136,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.302899349844443,0.15241361331,0.302478555410522,0.292373642219257,0,0,1.13365191807606,0.443971906748129,0,0.503653849092235,1.35232715822533,9.19644129710792,8.05867146775966,1.50057865355346,7.52358156053045,0,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0.906284817968409,1.55328093525546,0.62272408550506,0.798049746802062,0.170733605754134,0,0.838452650511929,1.47074806760011,2.00022055021454,0.618105171716683,0.320919209591815,1.01078884705519,1.01391719956096,1.50901073108861,0.842773567228942,1.79270426733634,1.03383844120104,2.38146845641537,1.15884325944855,1.54327376370964,0,0.441596760403192,0.685738504770831,0.70990322463735,0.476872379894642,1.30811774969096,1.31753132581463,0.846146078916765,0.914639864363863,1.8414879800649,1.90125759384206,1.68342681497322,0.949080144993393,1.0835493061312,0,0.929621047115796,2.12197272079256,1.49886346762768,1.16965804222704,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843 | |||
|short_description=p2@Prr15 | |||
}} |
Revision as of 23:23, 5 August 2015
Short description: | p2@Prr15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prr15_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -123bp_to_ENSMUST00000059138, NM_030024, uc009bzu.1_5end |
EntrezGene: | 78004 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.16e-08 | 9 |
epithelial cell of alimentary canal | 2.16e-08 | 9 |
columnar/cuboidal epithelial cell | 2.12e-07 | 7 |
brush border epithelial cell | 9.52e-07 | 6 |
gut absorptive cell | 9.52e-07 | 6 |
enterocyte | 9.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.89e-21 | 31 |
gastrointestinal system | 1.17e-19 | 47 |
mucosa | 1.66e-13 | 15 |
intestinal mucosa | 8.45e-12 | 13 |
wall of intestine | 8.45e-12 | 13 |
gastrointestinal system mucosa | 8.45e-12 | 13 |
simple columnar epithelium | 1.78e-09 | 11 |
reproductive structure | 4.18e-09 | 26 |
reproductive system | 4.18e-09 | 26 |
epithelium of mucosa | 2.16e-08 | 9 |
gastrointestinal system epithelium | 2.16e-08 | 9 |
intestinal epithelium | 2.16e-08 | 9 |
reproductive organ | 6.98e-08 | 24 |
organ component layer | 1.14e-07 | 24 |
male organism | 1.70e-07 | 16 |
male reproductive system | 1.70e-07 | 16 |
gonad | 2.59e-07 | 18 |
gonad primordium | 2.59e-07 | 18 |
external genitalia | 3.26e-07 | 17 |
indifferent external genitalia | 3.26e-07 | 17 |
indifferent gonad | 3.26e-07 | 17 |
male reproductive organ | 7.90e-07 | 15 |