FFCP PHASE1:Mm9::chr18:62708572..62708604,+: Difference between revisions
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{{FFCP|EntrezGene=328971|HGNC=|UniProt=E0CXN2|association_with_transcript=0bp_to_ENSMUST00000162365_5end|description=CAGE_peak_1_at_Spink10_5end|id=chr18:62708572..62708604,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!7.65e-12!94;UBERON:0007811!7.74e-11!86;UBERON:0000955!5.32e-08!50;UBERON:0006238!5.32e-08!50;UBERON:0001049!1.23e-07!52;UBERON:0005068!1.23e-07!52;UBERON:0006241!1.23e-07!52;UBERON:0007135!1.23e-07!52;UBERON:0002616!1.26e-07!49;UBERON:0000033!1.60e-07!63;UBERON:0003056!8.66e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.86e-09,64;UBERON:0003075,9.86e-09,64;UBERON:0007284,9.86e-09,64;UBERON:0000073,1.15e-08,54;UBERON:0001049,9.40e-08,52;UBERON:0005068,9.40e-08,52;UBERON:0006241,9.40e-08,52;UBERON:0007135,9.40e-08,52;UBERON:0010371,1.98e-07,73;UBERON:0003056,6.52e-07,49;UBERON:0000955,9.97e-07,47;UBERON:0006238,9.97e-07,47|phase1_expression=0.320297694209588,0.348975407639361,0,0.90739263392049,2.50447864973174,0.671517087647559,0.700837921786577,4.51931632045517,1.97104211012333,1.87251621057595,3.08192342805909,2.55270908785077,3.0816131387617,2.88487327982691,0.999329285446988,1.01237633694913,0.699561878128147,2.83915948822414,1.37114433605739,1.69755860719212,1.9559956734746,2.18440092641948,1.04479915655574,1.75991665072747,1.60586496747019,0,0,0.215471232685889,1.52018735565099,1.00812051903972,0.443461021310609,1.27006134691926,0.61506478758457,0,0.577703239502549,0.664938581433969,0.408338712524738,4.18531630736908,2.3440060335714,2.61761871986899,2.35292595212406,2.04913645487534,2.42755176515577,0.881277725829041,1.01376931219515,1.83546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0.194429899074283,0.55994568650145,0,2.68452169692378,1.45072428402269,4.36921938885203,0.257259436035947,0.573066879877513,0,1.41621522601718,1.5869729378161,1.90149421051854,0.677689064138264,0,1.3498495759221,1.97773272513395,2.8419204597844,0.898800331555214,0.384218305321555,2.07379224616955,1.35005938331691,0.841299845405528,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,5.50579404996943,4.72443150915195,8.60196586234964,1.05509030184155,2.37867873366265,2.08365348222704,5.02529398202486,6.75315132038016,3.20876320331301,2.94628585473668,4.27115042397309,2.42319279572891,1.36307147999731,0.982430281388212,0.289864488701678,0.860423876981386,0.679971333707751,0,1.29955283489534,0,0.280888840263504,1.02258193546835,1.29893002301434,0.35333957451034,0.281686839553361,1.28326477414318,0,0,1.5154372870785,1.26679932737549,2.02209778005913,1.02765491747154,2.07150306917737,1.03909497345377,1.38788261412909,0.608930956624282,0.691846491768175,2.26083960828934,1.29347577849275,0.628332956648377,1.48316980640624,1.01219549843938,1.76922110389975,0.323533699894818,2.20841518460394,1.45462575940567,0,5.27005434620785,5.65506108396329,0.766371165625774,1.55759661857696,1.19980546198682,2.03312363316904,6.74057877321702,4.11750542536764,3.39266750704734,6.25767552692195,4.34716277461562,5.61027720310812,7.78758062725237,0.916554274652847,1.11966273549084,2.77995034277042,1.68353484709179,2.99277018814219,1.83921683546778,1.80062129805349,4.9732589885786,2.4493139694478,4.09963904911519,2.99845518591132,1.81092359517311,1.72454394346274,4.16033376369202,2.46331573829528,1.53437012699302,1.94633074457919,2.78601733217733,2.26360350048738,2.7864797354589,1.40442637462647,1.80143534980301,2.27330799516474,0.414251545071004,0.469052119962192,1.44049649168812,1.18372367792605,1.37734962223183,1.3884040159864,2.55787339225449,0.536546802799238,0.233530684734339,0.822799249567402,1.47750717671186,1.05389452409612,0.877199924551994,1.3173006917463,0.671032093801859,7.14985825118033,3.2929475961371,0.991256348951394,1.58670339998127,2.34617075588757,5.10920678092965,2.06187938115349,1.00841762311671,2.89091456998331,1.33157938278791,0.474529061544512,1.31759163779209,0.754005626400808,1.98956472041151,0.974820435595601,1.79763881730844,1.72910439899755,2.19055400579804,0.948339504765408,2.97046132785295,1.1270773567308,3.05476991767971,0.969762435838129,1.82353131714828,1.7706230394792,2.21415221969403,1.72698600625512,1.60416313098341,0.592905254174298,1.83529616287703,1.57247196090562,1.12431056192427,2.02860121388503,0.72353147925725,1.78238096246994,1.72617682470486,1.13494658742525,0.823684239564244,0,1.11642284300551,1.87222603868736,1.01031551178845,1.25578189465339,0.964887042726734,1.10851914099963,1.89491411770485,2.28150967018836,2.54617628662782,2.58159273117352,2.51259386162724,1.19021820443007,1.56106918286239,2.20689201748667,2.21464689648775,1.59454768657487,1.47476983244164,2.76295970985433,1.88043776155965,3.01582567878545,1.08781136763742,0.983528546038072,2.20749397043786,5.77982123956051,10.1974167335217,0.491804836130026,1.76729649043061,2.2085575359138,1.56175497718655,1.07711698866399,1.19484398976276,1.33679204449436,1.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328971 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CXN2 | |||
|association_with_transcript=0bp_to_ENSMUST00000162365_5end | |||
|cluster_id=chr18:62708572..62708604,+ | |||
|description=CAGE_peak_1_at_Spink10_5end | |||
|id=chr18:62708572..62708604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.65e-12!94;UBERON:0007811!7.74e-11!86;UBERON:0000955!5.32e-08!50;UBERON:0006238!5.32e-08!50;UBERON:0001049!1.23e-07!52;UBERON:0005068!1.23e-07!52;UBERON:0006241!1.23e-07!52;UBERON:0007135!1.23e-07!52;UBERON:0002616!1.26e-07!49;UBERON:0000033!1.60e-07!63;UBERON:0003056!8.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.86e-09,64;UBERON:0003075,9.86e-09,64;UBERON:0007284,9.86e-09,64;UBERON:0000073,1.15e-08,54;UBERON:0001049,9.40e-08,52;UBERON:0005068,9.40e-08,52;UBERON:0006241,9.40e-08,52;UBERON:0007135,9.40e-08,52;UBERON:0010371,1.98e-07,73;UBERON:0003056,6.52e-07,49;UBERON:0000955,9.97e-07,47;UBERON:0006238,9.97e-07,47 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.90739263392049,2.50447864973174,0.671517087647559,0.700837921786577,4.51931632045517,1.97104211012333,1.87251621057595,3.08192342805909,2.55270908785077,3.0816131387617,2.88487327982691,0.999329285446988,1.01237633694913,0.699561878128147,2.83915948822414,1.37114433605739,1.69755860719212,1.9559956734746,2.18440092641948,1.04479915655574,1.75991665072747,1.60586496747019,0,0,0.215471232685889,1.52018735565099,1.00812051903972,0.443461021310609,1.27006134691926,0.61506478758457,0,0.577703239502549,0.664938581433969,0.408338712524738,4.18531630736908,2.3440060335714,2.61761871986899,2.35292595212406,2.04913645487534,2.42755176515577,0.881277725829041,1.01376931219515,1.83546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0.194429899074283,0.55994568650145,0,2.68452169692378,1.45072428402269,4.36921938885203,0.257259436035947,0.573066879877513,0,1.41621522601718,1.5869729378161,1.90149421051854,0.677689064138264,0,1.3498495759221,1.97773272513395,2.8419204597844,0.898800331555214,0.384218305321555,2.07379224616955,1.35005938331691,0.841299845405528,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,5.50579404996943,4.72443150915195,8.60196586234964,1.05509030184155,2.37867873366265,2.08365348222704,5.02529398202486,6.75315132038016,3.20876320331301,2.94628585473668,4.27115042397309,2.42319279572891,1.36307147999731,0.982430281388212,0.289864488701678,0.860423876981386,0.679971333707751,0,1.29955283489534,0,0.280888840263504,1.02258193546835,1.29893002301434,0.35333957451034,0.281686839553361,1.28326477414318,0,0,1.5154372870785,1.26679932737549,2.02209778005913,1.02765491747154,2.07150306917737,1.03909497345377,1.38788261412909,0.608930956624282,0.691846491768175,2.26083960828934,1.29347577849275,0.628332956648377,1.48316980640624,1.01219549843938,1.76922110389975,0.323533699894818,2.20841518460394,1.45462575940567,0,5.27005434620785,5.65506108396329,0.766371165625774,1.55759661857696,1.19980546198682,2.03312363316904,6.74057877321702,4.11750542536764,3.39266750704734,6.25767552692195,4.34716277461562,5.61027720310812,7.78758062725237,0.916554274652847,1.11966273549084,2.77995034277042,1.68353484709179,2.99277018814219,1.83921683546778,1.80062129805349,4.9732589885786,2.4493139694478,4.09963904911519,2.99845518591132,1.81092359517311,1.72454394346274,4.16033376369202,2.46331573829528,1.53437012699302,1.94633074457919,2.78601733217733,2.26360350048738,2.7864797354589,1.40442637462647,1.80143534980301,2.27330799516474,0.414251545071004,0.469052119962192,1.44049649168812,1.18372367792605,1.37734962223183,1.3884040159864,2.55787339225449,0.536546802799238,0.233530684734339,0.822799249567402,1.47750717671186,1.05389452409612,0.877199924551994,1.3173006917463,0.671032093801859,7.14985825118033,3.2929475961371,0.991256348951394,1.58670339998127,2.34617075588757,5.10920678092965,2.06187938115349,1.00841762311671,2.89091456998331,1.33157938278791,0.474529061544512,1.31759163779209,0.754005626400808,1.98956472041151,0.974820435595601,1.79763881730844,1.72910439899755,2.19055400579804,0.948339504765408,2.97046132785295,1.1270773567308,3.05476991767971,0.969762435838129,1.82353131714828,1.7706230394792,2.21415221969403,1.72698600625512,1.60416313098341,0.592905254174298,1.83529616287703,1.57247196090562,1.12431056192427,2.02860121388503,0.72353147925725,1.78238096246994,1.72617682470486,1.13494658742525,0.823684239564244,0,1.11642284300551,1.87222603868736,1.01031551178845,1.25578189465339,0.964887042726734,1.10851914099963,1.89491411770485,2.28150967018836,2.54617628662782,2.58159273117352,2.51259386162724,1.19021820443007,1.56106918286239,2.20689201748667,2.21464689648775,1.59454768657487,1.47476983244164,2.76295970985433,1.88043776155965,3.01582567878545,1.08781136763742,0.983528546038072,2.20749397043786,5.77982123956051,10.1974167335217,0.491804836130026,1.76729649043061,2.2085575359138,1.56175497718655,1.07711698866399,1.19484398976276,1.33679204449436,1.69845918473299,0.404810701674894,2.63030272120181,1.58115111178609,3.53453448063988,1.84522110770749,0.534196811001766,0.81443479676788,1.81467135269789,2.65490276679926,1.45668381692989,1.81394134178851,1.13163047853539,0.885905678642318,1.22974059177571,1.29214146584111,2.54473610634254,2.13898427030833,2.21225730555071,0,1.03135543248187,2.04263763452273,2.70091641046965,0.776152102696527,1.28602221018955,2.12808280370728,1.78368817602071,1.15184314421485,1.522324745573,1.40803024838226,0.63549621259146,1.10264199027481,1.31909002353184,2.42196640043858,2.11095237248546,1.43246812803764,2.46211349617592,1.45740418314925,9.08583979851498,2.05045056957423,1.44470807574256,1.11116716421827,1.50694765603753,1.77702496037333,1.83022538565218,1.86976272993241,2.09927178485487,2.3493995546752,0.954670618015114,2.05618395827738,3.04979200690273,2.05210147561422,1.88179466413022,0.87345025498471,1.61837215661785,0.743881101528023,0.523511883968059,3.11075935900303,1.24267862617385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| |||
|short_description=p1@Spink10 | |||
}} |
Revision as of 00:05, 6 August 2015
Short description: | p1@Spink10 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spink10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000162365_5end |
EntrezGene: | 328971 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.86e-09 | 64 |
neural plate | 9.86e-09 | 64 |
presumptive neural plate | 9.86e-09 | 64 |
regional part of nervous system | 1.15e-08 | 54 |
neural tube | 9.40e-08 | 52 |
neural rod | 9.40e-08 | 52 |
future spinal cord | 9.40e-08 | 52 |
neural keel | 9.40e-08 | 52 |
ecto-epithelium | 1.98e-07 | 73 |
pre-chordal neural plate | 6.52e-07 | 49 |
brain | 9.97e-07 | 47 |
future brain | 9.97e-07 | 47 |