FFCP PHASE1:Mm9::chrX:139953082..139953099,+: Difference between revisions
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{{FFCP|EntrezGene=18481|HGNC=|MCL_coexpression_id=3743|UniProt=Q61036,A3KGC0|association_with_transcript=-34bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end|description=CAGE_peak_2_at_Pak3_5end|id=chrX:139953082..139953099,+|ontology_enrichment_celltype=CL:0000117!6.65e-12!23;CL:0000337!6.65e-12!23;CL:0000393!8.76e-12!39;CL:0000211!8.76e-12!39;CL:0000540!1.75e-10!33;CL:0000047!1.75e-10!33;CL:0000031!1.75e-10!33;CL:0000404!1.75e-10!33;CL:0000055!1.83e-09!50;CL:0000221!4.35e-09!44;CL:0000133!4.35e-09!44;CL:0002319!9.81e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.98e-14,23;CL:0000337,7.98e-14,23;CL:0000393,1.12e-11,39;CL:0000211,1.12e-11,39;CL:0000540,3.93e-10,33;CL:0000047,3.93e-10,33;CL:0000031,3.93e-10,33;CL:0000404,3.93e-10,33;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44;CL:0002319,5.89e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.10e-27!102;UBERON:0000924!1.10e-27!102;UBERON:0006601!1.10e-27!102;UBERON:0000033!1.28e-24!63;UBERON:0002346!3.09e-24!71;UBERON:0003075!3.09e-24!71;UBERON:0007284!3.09e-24!71;UBERON:0000073!5.00e-23!75;UBERON:0001016!5.00e-23!75;UBERON:0001017!1.09e-22!73;UBERON:0005743!1.09e-22!73;UBERON:0003056!2.25e-21!49;UBERON:0001049!8.49e-21!52;UBERON:0005068!8.49e-21!52;UBERON:0006241!8.49e-21!52;UBERON:0007135!8.49e-21!52;UBERON:0000955!7.63e-20!50;UBERON:0006238!7.63e-20!50;UBERON:0002616!2.31e-19!49;UBERON:0003080!8.31e-17!40;UBERON:0002020!9.02e-17!34;UBERON:0002780!4.51e-16!39;UBERON:0001890!4.51e-16!39;UBERON:0006240!4.51e-16!39;UBERON:0002791!4.15e-14!29;UBERON:0003528!4.15e-14!29;UBERON:0001893!4.15e-14!29;UBERON:0007811!3.32e-13!86;UBERON:0000153!1.02e-12!94;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!8.39e-09!17;UBERON:0002021!3.36e-07!10;UBERON:0000411!3.36e-07!10;UBERON:0001950!3.36e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.06e-31,95;UBERON:0000924,6.06e-31,95;UBERON:0006601,6.06e-31,95;UBERON:0010371,6.48e-31,73;UBERON:0002346,6.74e-29,64;UBERON:0003075,6.74e-29,64;UBERON:0007284,6.74e-29,64;UBERON:0000073,8.37e-26,54;UBERON:0003056,1.59e-24,49;UBERON:0001049,3.77e-24,52;UBERON:0005068,3.77e-24,52;UBERON:0006241,3.77e-24,52;UBERON:0007135,3.77e-24,52;UBERON:0001016,4.88e-24,75;UBERON:0001017,1.25e-23,73;UBERON:0000955,1.50e-20,47;UBERON:0006238,1.50e-20,47;UBERON:0002616,5.38e-20,46;UBERON:0003080,3.99e-19,40;UBERON:0002020,4.80e-19,34;UBERON:0002780,2.92e-18,39;UBERON:0001890,2.92e-18,39;UBERON:0006240,2.92e-18,39;UBERON:0010314,8.20e-18,92;UBERON:0003528,6.74e-16,29;UBERON:0002791,6.74e-16,29;UBERON:0001893,6.74e-16,29;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0002619,1.27e-09,17;UBERON:0002021,2.98e-08,10;UBERON:0000411,2.98e-08,10;UBERON:0001950,2.98e-08,10;UBERON:0000020,4.33e-07,12;UBERON:0001032,4.33e-07,12;UBERON:0004456,4.33e-07,12|phase1_expression=11.69086583865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,8.71841608487825,8.81024410376071,0,1.30815093828268,0.439372365468944,2.52758868796568,0.139986421625363,0,0,0,0,1.28629718017973,1.14613375975503,3.09403255366465,11.7343547298567,11.6378015439847,12.6766280701236,0.677689064138264,0,0,0,0,1.19840044207362,0.768436610643109,3.83651565541367,1.62007125998029,3.15487442027073,5.42736870367227,7.73039893330647,10.0442455356262,5.75072826109418,7.35375029288017,19.82085857989,18.5146640223522,22.733766921924,13.1886287730194,11.0700048758916,15.6274011167028,12.5632349550621,12.9435400307286,15.7382195210114,16.2045722010517,16.3727432918968,17.5215479075783,2.80186915332781,2.64500460373749,3.18850937571846,0,0,0,0,0,0.561777680527007,3.2381761289831,2.33807404142582,1.7666978725517,6.61964072950398,2.56652954828636,5.09610479413291,0,0.649473123033642,0.253359865475099,0,0.68510327831436,0,3.56261133755579,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,1.41106448562846,0.376999773989026,1.23597483867187,1.44599356919912,0,0.647067399789637,0,0.484875253135222,0,2.63502717310392,2.72280718857492,0.255457055208591,0,0,0,32.953940669061,29.7375391832107,10.4293112253677,18.7730265807659,12.5300574091862,25.3501414362663,19.1444690419954,0.712875546952214,0.373220911830279,0.252722758433675,5.6819301089348,4.55421550369463,5.9774547152703,9.00310649026746,10.7000420663358,16.39679629547,26.7757675395336,15.1796793786761,8.53721123438752,1.29340795759705,0.756424320671277,1.58356011747554,1.09597866213787,1.11218899690239,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0,0.492502392237286,0.0810688095458557,0,0,0.134206418760372,15.7717461423095,8.02655976558419,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.190225626112559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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18481 | |||
|HGNC= | |||
|MCL_coexpression_id=3743 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61036,uniprot:A3KGC0 | |||
|association_with_transcript=-34bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end | |||
|cluster_id=chrX:139953082..139953099,+ | |||
|description=CAGE_peak_2_at_Pak3_5end | |||
|id=chrX:139953082..139953099,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.65e-12!23;CL:0000337!6.65e-12!23;CL:0000393!8.76e-12!39;CL:0000211!8.76e-12!39;CL:0000540!1.75e-10!33;CL:0000047!1.75e-10!33;CL:0000031!1.75e-10!33;CL:0000404!1.75e-10!33;CL:0000055!1.83e-09!50;CL:0000221!4.35e-09!44;CL:0000133!4.35e-09!44;CL:0002319!9.81e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.98e-14,23;CL:0000337,7.98e-14,23;CL:0000393,1.12e-11,39;CL:0000211,1.12e-11,39;CL:0000540,3.93e-10,33;CL:0000047,3.93e-10,33;CL:0000031,3.93e-10,33;CL:0000404,3.93e-10,33;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44;CL:0002319,5.89e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.10e-27!102;UBERON:0000924!1.10e-27!102;UBERON:0006601!1.10e-27!102;UBERON:0000033!1.28e-24!63;UBERON:0002346!3.09e-24!71;UBERON:0003075!3.09e-24!71;UBERON:0007284!3.09e-24!71;UBERON:0000073!5.00e-23!75;UBERON:0001016!5.00e-23!75;UBERON:0001017!1.09e-22!73;UBERON:0005743!1.09e-22!73;UBERON:0003056!2.25e-21!49;UBERON:0001049!8.49e-21!52;UBERON:0005068!8.49e-21!52;UBERON:0006241!8.49e-21!52;UBERON:0007135!8.49e-21!52;UBERON:0000955!7.63e-20!50;UBERON:0006238!7.63e-20!50;UBERON:0002616!2.31e-19!49;UBERON:0003080!8.31e-17!40;UBERON:0002020!9.02e-17!34;UBERON:0002780!4.51e-16!39;UBERON:0001890!4.51e-16!39;UBERON:0006240!4.51e-16!39;UBERON:0002791!4.15e-14!29;UBERON:0003528!4.15e-14!29;UBERON:0001893!4.15e-14!29;UBERON:0007811!3.32e-13!86;UBERON:0000153!1.02e-12!94;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!8.39e-09!17;UBERON:0002021!3.36e-07!10;UBERON:0000411!3.36e-07!10;UBERON:0001950!3.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.06e-31,95;UBERON:0000924,6.06e-31,95;UBERON:0006601,6.06e-31,95;UBERON:0010371,6.48e-31,73;UBERON:0002346,6.74e-29,64;UBERON:0003075,6.74e-29,64;UBERON:0007284,6.74e-29,64;UBERON:0000073,8.37e-26,54;UBERON:0003056,1.59e-24,49;UBERON:0001049,3.77e-24,52;UBERON:0005068,3.77e-24,52;UBERON:0006241,3.77e-24,52;UBERON:0007135,3.77e-24,52;UBERON:0001016,4.88e-24,75;UBERON:0001017,1.25e-23,73;UBERON:0000955,1.50e-20,47;UBERON:0006238,1.50e-20,47;UBERON:0002616,5.38e-20,46;UBERON:0003080,3.99e-19,40;UBERON:0002020,4.80e-19,34;UBERON:0002780,2.92e-18,39;UBERON:0001890,2.92e-18,39;UBERON:0006240,2.92e-18,39;UBERON:0010314,8.20e-18,92;UBERON:0003528,6.74e-16,29;UBERON:0002791,6.74e-16,29;UBERON:0001893,6.74e-16,29;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0002619,1.27e-09,17;UBERON:0002021,2.98e-08,10;UBERON:0000411,2.98e-08,10;UBERON:0001950,2.98e-08,10;UBERON:0000020,4.33e-07,12;UBERON:0001032,4.33e-07,12;UBERON:0004456,4.33e-07,12 | |||
|phase1_expression=11.69086583865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,8.71841608487825,8.81024410376071,0,1.30815093828268,0.439372365468944,2.52758868796568,0.139986421625363,0,0,0,0,1.28629718017973,1.14613375975503,3.09403255366465,11.7343547298567,11.6378015439847,12.6766280701236,0.677689064138264,0,0,0,0,1.19840044207362,0.768436610643109,3.83651565541367,1.62007125998029,3.15487442027073,5.42736870367227,7.73039893330647,10.0442455356262,5.75072826109418,7.35375029288017,19.82085857989,18.5146640223522,22.733766921924,13.1886287730194,11.0700048758916,15.6274011167028,12.5632349550621,12.9435400307286,15.7382195210114,16.2045722010517,16.3727432918968,17.5215479075783,2.80186915332781,2.64500460373749,3.18850937571846,0,0,0,0,0,0.561777680527007,3.2381761289831,2.33807404142582,1.7666978725517,6.61964072950398,2.56652954828636,5.09610479413291,0,0.649473123033642,0.253359865475099,0,0.68510327831436,0,3.56261133755579,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,1.41106448562846,0.376999773989026,1.23597483867187,1.44599356919912,0,0.647067399789637,0,0.484875253135222,0,2.63502717310392,2.72280718857492,0.255457055208591,0,0,0,32.953940669061,29.7375391832107,10.4293112253677,18.7730265807659,12.5300574091862,25.3501414362663,19.1444690419954,0.712875546952214,0.373220911830279,0.252722758433675,5.6819301089348,4.55421550369463,5.9774547152703,9.00310649026746,10.7000420663358,16.39679629547,26.7757675395336,15.1796793786761,8.53721123438752,1.29340795759705,0.756424320671277,1.58356011747554,1.09597866213787,1.11218899690239,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0,0.492502392237286,0.0810688095458557,0,0,0.134206418760372,15.7717461423095,8.02655976558419,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,1.29327233116623,0.37898282354097,0.162964976442026,0,0.704070744865506,0.837531287209079,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,22.6376331882787,18.6366581681603,11.3115112309906,0.757412781613119,1.26203287766503,0.780877488593277,1.72338718186239,0.238968797952552,0.445597348164788,1.41538265394416,0.404810701674894,0.292255857911312,1.58115111178609,8.67567554338879,3.69044221541498,0.178065603667255,0.488660878060728,1.81467135269789,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,14.6389030474129,4.14140516272013,1.16422815404479,1.92903331528433,2.83744373827638,1.42695054081656,1.64549020602121,1.522324745573,0,0,0.441056796109924,11.3771514529621,5.16686165426898,4.1012788951146,4.77489376012546,5.58079059133208,0.582961673259701,28.5554965096185,0,0,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.661227645802687,0,0,0,2.81846469342095,1.34564891439581,0.66183396182839,2.91676782516071,3.22899558694328,5.57555214119568,4.3422178298929,6.90083239672936,12.687980675511,4.83168241652012,4.89651010638371,0,0,0.410843828659309,0.389762468933385,0.179026695667481,0,0.120195449519969,0.443068581523732,0.302899349844443,0.228620419965,0,0,0,0.116876902181569,1.58711268530648,0,0,0,0.579568782096571,2.064507229963,2.38097111547445,2.35805216986972,2.50786052017682,16.3778034358949,20.714635642823,17.1868654031819,11.5141632170271,16.4419804744954,14.3524840504043,10.8003600037089,23.4167025676595,14.5005570874945,11.9084871702919,4.04770655578289,15.9609949360412,7.85374586469017,4.132814190161,7.1268475293514,6.43452279575049,4.00044110042907,4.32673620201678,6.4183841918363,5.05394423527595,8.11133759648767,5.28153755881013,3.46473577638565,3.13723246783859,3.10151532360312,6.19181798667996,2.78122382267653,2.50781986602817,1.64834360321323,3.53277408322554,2.74295401908332,2.8396128985494,4.05341522910446,4.21504608233753,3.85848459702856,4.14611578669215,4.20734337607377,3.41990624869196,2.71608227691724,5.61142271657738,4.03359061622192,1.67457620038458,2.86461730218783,3.40861050609125,2.3148793317737,5.9954538705107,3.74290573512653,3.86767897286937,1.72159498861959,1.76473135295612,1.39120701372253 | |||
|short_description=p2@Pak3 | |||
}} |
Revision as of 01:40, 6 August 2015
Short description: | p2@Pak3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pak3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3743 |
Association with transcript: | -34bp_to_ENSMUST00000033640, ENSMUST00000070348, NM_001195048, uc009umg.2_5end |
EntrezGene: | 18481 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.98e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.98e-14 | 23 |
electrically responsive cell | 1.12e-11 | 39 |
electrically active cell | 1.12e-11 | 39 |
neuron | 3.93e-10 | 33 |
neuronal stem cell | 3.93e-10 | 33 |
neuroblast | 3.93e-10 | 33 |
electrically signaling cell | 3.93e-10 | 33 |
ectodermal cell | 2.42e-08 | 44 |
neurectodermal cell | 2.42e-08 | 44 |
neural cell | 5.89e-08 | 43 |