FFCP PHASE1:Mm9::chr6:71443844..71443912,+: Difference between revisions
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{{FFCP|EntrezGene=22644|HGNC=|MCL_coexpression_id=175|UniProt=Q9R1W3,D3Z0Y5,Q3TGP6|association_with_transcript=0bp_to_ENSMUST00000064637,ENSMUST00000114178,NM_009543,uc009cgv.1_5end|description=CAGE_peak_1_at_Rnf103_5end|id=chr6:71443844..71443912,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.68e-07!15;UBERON:0001049!3.03e-07!52;UBERON:0005068!3.03e-07!52;UBERON:0006241!3.03e-07!52;UBERON:0007135!3.03e-07!52;UBERON:0000160!3.56e-07!43;UBERON:0000955!5.74e-07!50;UBERON:0006238!5.74e-07!50;UBERON:0002020!6.03e-07!34;UBERON:0007023!7.48e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.77e-11,31;UBERON:0011216,7.83e-10,194;UBERON:0000073,9.60e-08,54;UBERON:0000344,1.68e-07,15;UBERON:0001049,3.03e-07,52;UBERON:0005068,3.03e-07,52;UBERON:0006241,3.03e-07,52;UBERON:0007135,3.03e-07,52;UBERON:0002020,6.03e-07,34;UBERON:0007023,7.48e-07,51|phase1_expression=19.3780104996801,64.9094258209212,71.4348805841572,87.4121570676739,115.20601788766,39.2837496273822,30.3696432774183,28.4071311571468,33.366927149945,31.8327755797911,5.99262888789267,4.86610169871552,29.7889270080298,28.7613123958501,5.99597571268193,5.66930748691513,5.59649502502517,12.3030244489713,10.4206969540361,11.8829102503448,14.4573593256819,8.83689465687879,5.48519557191764,35.3583254373429,41.5230798731578,73.5016914067226,44.3684856043847,45.2489588640367,52.2564403505028,44.3573028377478,32.5943850663298,8.89042942843484,3.07532393792285,0,22.8192779603507,13.9637102101134,22.8669679013853,17.1597968602132,17.1893775795236,7.85285615960697,21.1763335691165,18.442228093878,17.9638830621527,21.0247686019214,26.3580021170738,19.0888622248149,17.2126095756569,8.93903141159831,14.0599156950062,18.0819806139084,11.3389001516544,11.5002051491977,26.6774343631801,36.2681071005672,29.9123481236793,18.5226793945882,16.6189395164479,19.5955395065428,21.2432283902578,19.5726662330652,24.0855933332348,8.13226876965917,9.78224275722253,13.498495759221,14.8329954385046,12.0781619540837,13.7816050838466,16.5213871288268,25.7150238525025,20.9259204414121,20.6118462124354,24.2803336743233,26.5042249141936,19.7210186736076,11.8848384062613,31.2534387447407,26.4278114398533,28.9850257453376,23.962619187974,19.2553980086083,16.0103376304217,19.2737947106001,24.0097379141188,22.5105044012672,25.8229038742809,25.3380583507354,28.0472211174233,22.927131836512,16.053952986635,19.6486056277642,31.0155002910795,52.4858564958646,106.075528058409,74.4790404460188,69.5260766669006,90.9494580807591,26.6844398250329,11.930122580464,8.83272415649754,11.3068663843309,23.802537942259,7.69958864485907,12.7402619853323,7.11066703153331,20.5666488960653,18.7486300451573,22.7486000256652,47.8430456022861,5.17875767294343,17.813056687779,8.15381035800839,7.91610243611567,13.1450833435953,10.5505848386836,20.695612455884,16.4623234641875,40.7871696761717,17.3519228303894,4.42305275974937,13.7501822455298,12.5879665522424,8.24287930329878,31.6865994070808,33.3770108593164,71.2118803165747,36.5303588948286,13.8985544426868,14.9975682748352,11.690460890722,20.5213175984607,42.0900554593136,23.4973638451056,28.6810128317256,25.8272611903634,24.103413168909,24.4984307232314,23.7285717771237,13.31154585528,12.1306924048164,21.4650693004203,7.28674480591141,9.88579049063934,10.803727788321,13.1113191517072,22.1798987233329,15.1174189936123,19.021450085625,15.5222022443409,7.11374376678379,8.69887968771969,10.205165201509,14.0285268753648,10.0097009721215,14.626590993931,11.5237996388448,9.75267907410617,4.21327912387941,7.20574139921202,9.94572247884574,9.32065976409758,9.14651633926275,9.36322719597277,13.0209604571866,12.9864392953287,9.41029388613007,9.06882384526591,13.1453966685813,16.9309746432396,14.8103864922132,15.1034066952768,18.3215509573634,16.2281986042119,14.2707574939183,19.7283435577747,26.9171134162083,24.0796792967526,52.5365864944239,33.3207713996066,10.024547775156,9.0572302025571,16.8816374331942,21.5801371346977,27.5748774367639,33.0992589435853,47.9274352159957,30.139908714494,41.4703094520445,49.9380744823289,34.7036075072034,25.1669434423182,45.3889904736858,41.8196673834171,9.293727146701,8.45438993311993,15.7790829942313,9.9789150644204,11.8311017172252,20.3393877681924,16.3782631151826,17.5656076095727,19.6248409801719,20.2371348831753,38.8352941484165,6.50695912292767,7.66580080941492,5.8464149220062,9.53442570525964,12.5412123071257,11.4581633301639,21.0018180339092,66.4754429777645,21.4157902286704,37.3797336971122,40.1912223481984,26.8352398878522,23.9949934049756,44.6699559669561,61.2703272131476,22.3551360101592,9.47457058852424,7.33342393989116,5.43184274480602,6.57132695207806,12.0604505358107,12.8543566078447,20.6841666729267,12.4531763843891,20.3747514476873,17.6994793209811,12.1258852889646,14.3328534948693,21.2634116114822,25.6345182696763,14.6854534631052,8.85175691434265,12.417153583713,22.6376331882787,19.33992828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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22644 | |||
|HGNC= | |||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9R1W3,uniprot:D3Z0Y5,uniprot:Q3TGP6 | |||
|association_with_transcript=0bp_to_ENSMUST00000064637,ENSMUST00000114178,NM_009543,uc009cgv.1_5end | |||
|cluster_id=chr6:71443844..71443912,+ | |||
|description=CAGE_peak_1_at_Rnf103_5end | |||
|id=chr6:71443844..71443912,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.68e-07!15;UBERON:0001049!3.03e-07!52;UBERON:0005068!3.03e-07!52;UBERON:0006241!3.03e-07!52;UBERON:0007135!3.03e-07!52;UBERON:0000160!3.56e-07!43;UBERON:0000955!5.74e-07!50;UBERON:0006238!5.74e-07!50;UBERON:0002020!6.03e-07!34;UBERON:0007023!7.48e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.77e-11,31;UBERON:0011216,7.83e-10,194;UBERON:0000073,9.60e-08,54;UBERON:0000344,1.68e-07,15;UBERON:0001049,3.03e-07,52;UBERON:0005068,3.03e-07,52;UBERON:0006241,3.03e-07,52;UBERON:0007135,3.03e-07,52;UBERON:0002020,6.03e-07,34;UBERON:0007023,7.48e-07,51 | |||
|phase1_expression=19.3780104996801,64.9094258209212,71.4348805841572,87.4121570676739,115.20601788766,39.2837496273822,30.3696432774183,28.4071311571468,33.366927149945,31.8327755797911,5.99262888789267,4.86610169871552,29.7889270080298,28.7613123958501,5.99597571268193,5.66930748691513,5.59649502502517,12.3030244489713,10.4206969540361,11.8829102503448,14.4573593256819,8.83689465687879,5.48519557191764,35.3583254373429,41.5230798731578,73.5016914067226,44.3684856043847,45.2489588640367,52.2564403505028,44.3573028377478,32.5943850663298,8.89042942843484,3.07532393792285,0,22.8192779603507,13.9637102101134,22.8669679013853,17.1597968602132,17.1893775795236,7.85285615960697,21.1763335691165,18.442228093878,17.9638830621527,21.0247686019214,26.3580021170738,19.0888622248149,17.2126095756569,8.93903141159831,14.0599156950062,18.0819806139084,11.3389001516544,11.5002051491977,26.6774343631801,36.2681071005672,29.9123481236793,18.5226793945882,16.6189395164479,19.5955395065428,21.2432283902578,19.5726662330652,24.0855933332348,8.13226876965917,9.78224275722253,13.498495759221,14.8329954385046,12.0781619540837,13.7816050838466,16.5213871288268,25.7150238525025,20.9259204414121,20.6118462124354,24.2803336743233,26.5042249141936,19.7210186736076,11.8848384062613,31.2534387447407,26.4278114398533,28.9850257453376,23.962619187974,19.2553980086083,16.0103376304217,19.2737947106001,24.0097379141188,22.5105044012672,25.8229038742809,25.3380583507354,28.0472211174233,22.927131836512,16.053952986635,19.6486056277642,31.0155002910795,52.4858564958646,106.075528058409,74.4790404460188,69.5260766669006,90.9494580807591,26.6844398250329,11.930122580464,8.83272415649754,11.3068663843309,23.802537942259,7.69958864485907,12.7402619853323,7.11066703153331,20.5666488960653,18.7486300451573,22.7486000256652,47.8430456022861,5.17875767294343,17.813056687779,8.15381035800839,7.91610243611567,13.1450833435953,10.5505848386836,20.695612455884,16.4623234641875,40.7871696761717,17.3519228303894,4.42305275974937,13.7501822455298,12.5879665522424,8.24287930329878,31.6865994070808,33.3770108593164,71.2118803165747,36.5303588948286,13.8985544426868,14.9975682748352,11.690460890722,20.5213175984607,42.0900554593136,23.4973638451056,28.6810128317256,25.8272611903634,24.103413168909,24.4984307232314,23.7285717771237,13.31154585528,12.1306924048164,21.4650693004203,7.28674480591141,9.88579049063934,10.803727788321,13.1113191517072,22.1798987233329,15.1174189936123,19.021450085625,15.5222022443409,7.11374376678379,8.69887968771969,10.205165201509,14.0285268753648,10.0097009721215,14.626590993931,11.5237996388448,9.75267907410617,4.21327912387941,7.20574139921202,9.94572247884574,9.32065976409758,9.14651633926275,9.36322719597277,13.0209604571866,12.9864392953287,9.41029388613007,9.06882384526591,13.1453966685813,16.9309746432396,14.8103864922132,15.1034066952768,18.3215509573634,16.2281986042119,14.2707574939183,19.7283435577747,26.9171134162083,24.0796792967526,52.5365864944239,33.3207713996066,10.024547775156,9.0572302025571,16.8816374331942,21.5801371346977,27.5748774367639,33.0992589435853,47.9274352159957,30.139908714494,41.4703094520445,49.9380744823289,34.7036075072034,25.1669434423182,45.3889904736858,41.8196673834171,9.293727146701,8.45438993311993,15.7790829942313,9.9789150644204,11.8311017172252,20.3393877681924,16.3782631151826,17.5656076095727,19.6248409801719,20.2371348831753,38.8352941484165,6.50695912292767,7.66580080941492,5.8464149220062,9.53442570525964,12.5412123071257,11.4581633301639,21.0018180339092,66.4754429777645,21.4157902286704,37.3797336971122,40.1912223481984,26.8352398878522,23.9949934049756,44.6699559669561,61.2703272131476,22.3551360101592,9.47457058852424,7.33342393989116,5.43184274480602,6.57132695207806,12.0604505358107,12.8543566078447,20.6841666729267,12.4531763843891,20.3747514476873,17.6994793209811,12.1258852889646,14.3328534948693,21.2634116114822,25.6345182696763,14.6854534631052,8.85175691434265,12.417153583713,22.6376331882787,19.3399282877135,8.0328123234571,22.9748543755979,16.4064274096453,10.1514073517126,15.5104846367615,12.4263774935327,16.0415045339324,13.0215204162863,15.7876173653209,15.4895604692995,19.7643888973262,34.0600595407115,22.0007132072816,10.6839362200353,21.8268525533792,23.5907275850726,22.5666735177937,8.74010290157933,11.7906187216253,9.43025398779491,11.2214719294694,11.6825356218692,23.2585463851399,18.9037539328303,16.0423820273125,14.8537276229834,14.7586052004998,20.6271086496374,27.235168460303,9.72329907769075,7.89087971074802,13.5032332069903,18.798064766081,20.155676389034,19.087686389846,26.7929155220847,14.0803024838226,36.0114520468494,25.3607657763206,16.488625294148,28.7406679518712,13.5704081088351,19.9351814485238,21.8307396660931,44.3050871677373,26.5158181875029,9.3978984438819,9.28740905834501,8.33375373163703,4.33247451110789,6.42462870288818,5.49067615695654,21.7572390392135,26.590775941495,32.4769938440396,17.184071124272,12.1789357528737,16.062237903021,1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| |||
|short_description=p1@Rnf103 | |||
}} |
Revision as of 02:12, 6 August 2015
Short description: | p1@Rnf103 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf103_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | 0bp_to_ENSMUST00000064637, ENSMUST00000114178, NM_009543, uc009cgv.1_5end |
EntrezGene: | 22644 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.77e-11 | 31 |
organ system subdivision | 7.83e-10 | 194 |
regional part of nervous system | 9.60e-08 | 54 |
mucosa | 1.68e-07 | 15 |
neural tube | 3.03e-07 | 52 |
neural rod | 3.03e-07 | 52 |
future spinal cord | 3.03e-07 | 52 |
neural keel | 3.03e-07 | 52 |
gray matter | 6.03e-07 | 34 |
adult organism | 7.48e-07 | 51 |