FFCP PHASE1:Mm9::chr8:12672099..12672132,-: Difference between revisions
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{{FFCP|EntrezGene=259279|HGNC=|UniProt=E9Q0R3,P58854,Q3TN67|association_with_transcript=0bp_to_ENSMUST00000164774,ENSMUST00000167547,NM_198031,uc009kwd.1,uc009kwe.1,uc012fzo.1_5end|description=CAGE_peak_1_at_Tubgcp3_5end|id=chr8:12672099..12672132,-|ontology_enrichment_celltype=CL:0000050!4.95e-07!9|ontology_enrichment_celltype_v019_2=CL:0000050,4.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.70e-10!29;UBERON:0000475!1.68e-09!200;UBERON:0001004!2.88e-08!42;UBERON:0007811!4.19e-08!86;UBERON:0000065!4.99e-08!41;UBERON:0000153!5.59e-08!94;UBERON:0003408!1.18e-07!24;UBERON:0002370!2.02e-07!23;UBERON:0000974!2.02e-07!23;UBERON:0004807!2.02e-07!23;UBERON:0005058!2.02e-07!23;UBERON:0003351!2.02e-07!23;UBERON:0009113!2.02e-07!23;UBERON:0003295!2.02e-07!23;UBERON:0009722!2.02e-07!23;UBERON:0005562!2.02e-07!23;UBERON:0007690!2.02e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.70e-10,29;UBERON:0005057,5.70e-10,29;UBERON:0000077,1.86e-09,35;UBERON:0001004,2.88e-08,42;UBERON:0000065,4.99e-08,41;UBERON:0003408,1.18e-07,24;UBERON:0002370,2.02e-07,23;UBERON:0000974,2.02e-07,23;UBERON:0004807,2.02e-07,23;UBERON:0005058,2.02e-07,23;UBERON:0003351,2.02e-07,23;UBERON:0009113,2.02e-07,23;UBERON:0003295,2.02e-07,23;UBERON:0009722,2.02e-07,23;UBERON:0005562,2.02e-07,23;UBERON:0007690,2.02e-07,23|phase1_expression=15.8547358633746,11.1672130444596,8.64498554840118,21.7774232140918,20.0358291978539,16.787927191189,17.9881733258555,41.5777101481876,29.4248429296984,36.748130632553,23.4568616468942,23.4530147446289,36.1233540154844,41.6121115514428,34.6434152288289,37.4579244671178,37.0767795407918,32.4926030318985,36.3353249055208,39.4682376172168,18.0291775120268,21.0496816545877,22.4631818659484,13.9193407830264,12.6175104586944,7.46501553349526,6.03066794622705,9.26526300549323,14.8218267175972,11.8454160987167,12.1951780860418,39.3719017544971,38.7490816178279,47.5445043046316,15.3091358468176,18.1195763440757,20.0085969137122,18.8339233831608,22.6587249911902,19.3703785270305,16.4704816648684,23.2235464885872,15.5363312969969,19.5140067862145,16.8285705824394,16.3356609423897,15.6478268869608,17.2239873540553,15.817405156882,15.748821825017,19.5980990275508,11.5002051491977,28.5230430298152,42.071004236658,33.2732861151039,17.7509010864803,20.3438742356517,18.5641953219879,25.8965069900285,24.8625760257855,19.0149421051854,19.3141383279405,15.1180115338894,13.9484456178617,8.89979726310277,11.3676818391376,14.6804054154018,11.1423308543251,25.5076446278855,27.1361936046698,25.86997024622,17.9960120174396,17.6694832761291,26.0905402327852,27.2201137691791,22.0612508786405,27.5289702498472,22.7283461791634,21.3513081226178,26.2453712583086,21.9570344645783,22.3992749339407,20.3803589271008,24.7615548413939,21.3917546887534,17.3830865429464,18.2235751422852,22.3679334990361,17.7956554332983,17.9104597453082,39.7114349521299,21.5105969245347,12.2394840067395,6.47643829965381,19.4932925234301,14.3368603871147,11.5164424508037,18.9177658061644,16.8860902991865,16.2536204274756,17.6054274720851,15.3991772897181,7.64415719119937,21.3320010945999,18.8347205679756,16.2150313904063,12.6381111253696,9.24889425724386,32.1082975722493,18.7037095221679,21.8591511725331,16.7456013071678,20.2941637585331,17.6345489446568,21.4011446986983,21.7403203000339,16.8092578059374,21.8345028949067,37.1536431818947,19.5737888436365,25.838457659866,20.3647606316793,11.1835056730873,21.6657789788545,25.1336048176146,16.0937944781413,23.7233946521722,17.9970819298022,21.7290088294941,26.0635712564392,19.6725259212009,27.6439574648302,23.4662832259573,24.2929684463814,24.103413168909,24.4984307232314,23.5248930494231,26.0010568575094,17.4378703319236,12.416069497302,24.2024023910629,20.2313851901456,25.7488845621649,20.3451504078215,32.79359259094,28.185018462667,24.7372552837684,20.6962696591213,21.3412313003514,22.6927296201383,19.5305747821983,20.1660073833369,18.0730711996639,25.7706603226403,17.6972637310831,26.6705917536781,21.066395619397,10.5512641917033,18.4706274607135,20.5054514810147,17.12040237862,18.9065164534066,19.8865577891577,18.8893662477508,14.9639099500757,17.2075119115302,19.047411499373,20.7842309413562,20.0763016894446,17.237583728305,18.8079638146385,14.3275987676826,17.564009223284,18.1178665326502,22.7113144449257,22.6390147234426,11.2342386214491,12.9580777665137,20.9022485524529,27.6361639513922,26.1600946483849,23.5969723809311,22.4601824283319,17.8812088545806,12.3377556001573,15.9757986082291,18.5988054512199,20.6914730922797,21.056121408865,20.6728463990471,16.6426298403515,20.1132685986911,30.3468641524931,23.5351935976041,28.1769339182701,22.1979947351393,22.4984885114446,27.6335130367855,24.4725398670876,19.0417090893687,18.5258498852822,22.8284753255331,12.1545577105731,29.6984288174647,29.8769672572069,35.9779379815766,33.066199786326,31.5942079275666,21.1339456978578,27.6188291952778,23.9960135627052,18.3956146836015,17.2521847832825,17.11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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:259279 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q0R3,uniprot:P58854,uniprot:Q3TN67 | |||
|association_with_transcript=0bp_to_ENSMUST00000164774,ENSMUST00000167547,NM_198031,uc009kwd.1,uc009kwe.1,uc012fzo.1_5end | |||
|cluster_id=chr8:12672099..12672132,- | |||
|description=CAGE_peak_1_at_Tubgcp3_5end | |||
|id=chr8:12672099..12672132,- | |||
|ontology_enrichment_celltype=CL:0000050!4.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,4.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.70e-10!29;UBERON:0000475!1.68e-09!200;UBERON:0001004!2.88e-08!42;UBERON:0007811!4.19e-08!86;UBERON:0000065!4.99e-08!41;UBERON:0000153!5.59e-08!94;UBERON:0003408!1.18e-07!24;UBERON:0002370!2.02e-07!23;UBERON:0000974!2.02e-07!23;UBERON:0004807!2.02e-07!23;UBERON:0005058!2.02e-07!23;UBERON:0003351!2.02e-07!23;UBERON:0009113!2.02e-07!23;UBERON:0003295!2.02e-07!23;UBERON:0009722!2.02e-07!23;UBERON:0005562!2.02e-07!23;UBERON:0007690!2.02e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.70e-10,29;UBERON:0005057,5.70e-10,29;UBERON:0000077,1.86e-09,35;UBERON:0001004,2.88e-08,42;UBERON:0000065,4.99e-08,41;UBERON:0003408,1.18e-07,24;UBERON:0002370,2.02e-07,23;UBERON:0000974,2.02e-07,23;UBERON:0004807,2.02e-07,23;UBERON:0005058,2.02e-07,23;UBERON:0003351,2.02e-07,23;UBERON:0009113,2.02e-07,23;UBERON:0003295,2.02e-07,23;UBERON:0009722,2.02e-07,23;UBERON:0005562,2.02e-07,23;UBERON:0007690,2.02e-07,23 | |||
|phase1_expression=15.8547358633746,11.1672130444596,8.64498554840118,21.7774232140918,20.0358291978539,16.787927191189,17.9881733258555,41.5777101481876,29.4248429296984,36.748130632553,23.4568616468942,23.4530147446289,36.1233540154844,41.6121115514428,34.6434152288289,37.4579244671178,37.0767795407918,32.4926030318985,36.3353249055208,39.4682376172168,18.0291775120268,21.0496816545877,22.4631818659484,13.9193407830264,12.6175104586944,7.46501553349526,6.03066794622705,9.26526300549323,14.8218267175972,11.8454160987167,12.1951780860418,39.3719017544971,38.7490816178279,47.5445043046316,15.3091358468176,18.1195763440757,20.0085969137122,18.8339233831608,22.6587249911902,19.3703785270305,16.4704816648684,23.2235464885872,15.5363312969969,19.5140067862145,16.8285705824394,16.3356609423897,15.6478268869608,17.2239873540553,15.817405156882,15.748821825017,19.5980990275508,11.5002051491977,28.5230430298152,42.071004236658,33.2732861151039,17.7509010864803,20.3438742356517,18.5641953219879,25.8965069900285,24.8625760257855,19.0149421051854,19.3141383279405,15.1180115338894,13.9484456178617,8.89979726310277,11.3676818391376,14.6804054154018,11.1423308543251,25.5076446278855,27.1361936046698,25.86997024622,17.9960120174396,17.6694832761291,26.0905402327852,27.2201137691791,22.0612508786405,27.5289702498472,22.7283461791634,21.3513081226178,26.2453712583086,21.9570344645783,22.3992749339407,20.3803589271008,24.7615548413939,21.3917546887534,17.3830865429464,18.2235751422852,22.3679334990361,17.7956554332983,17.9104597453082,39.7114349521299,21.5105969245347,12.2394840067395,6.47643829965381,19.4932925234301,14.3368603871147,11.5164424508037,18.9177658061644,16.8860902991865,16.2536204274756,17.6054274720851,15.3991772897181,7.64415719119937,21.3320010945999,18.8347205679756,16.2150313904063,12.6381111253696,9.24889425724386,32.1082975722493,18.7037095221679,21.8591511725331,16.7456013071678,20.2941637585331,17.6345489446568,21.4011446986983,21.7403203000339,16.8092578059374,21.8345028949067,37.1536431818947,19.5737888436365,25.838457659866,20.3647606316793,11.1835056730873,21.6657789788545,25.1336048176146,16.0937944781413,23.7233946521722,17.9970819298022,21.7290088294941,26.0635712564392,19.6725259212009,27.6439574648302,23.4662832259573,24.2929684463814,24.103413168909,24.4984307232314,23.5248930494231,26.0010568575094,17.4378703319236,12.416069497302,24.2024023910629,20.2313851901456,25.7488845621649,20.3451504078215,32.79359259094,28.185018462667,24.7372552837684,20.6962696591213,21.3412313003514,22.6927296201383,19.5305747821983,20.1660073833369,18.0730711996639,25.7706603226403,17.6972637310831,26.6705917536781,21.066395619397,10.5512641917033,18.4706274607135,20.5054514810147,17.12040237862,18.9065164534066,19.8865577891577,18.8893662477508,14.9639099500757,17.2075119115302,19.047411499373,20.7842309413562,20.0763016894446,17.237583728305,18.8079638146385,14.3275987676826,17.564009223284,18.1178665326502,22.7113144449257,22.6390147234426,11.2342386214491,12.9580777665137,20.9022485524529,27.6361639513922,26.1600946483849,23.5969723809311,22.4601824283319,17.8812088545806,12.3377556001573,15.9757986082291,18.5988054512199,20.6914730922797,21.056121408865,20.6728463990471,16.6426298403515,20.1132685986911,30.3468641524931,23.5351935976041,28.1769339182701,22.1979947351393,22.4984885114446,27.6335130367855,24.4725398670876,19.0417090893687,18.5258498852822,22.8284753255331,12.1545577105731,29.6984288174647,29.8769672572069,35.9779379815766,33.066199786326,31.5942079275666,21.1339456978578,27.6188291952778,23.9960135627052,18.3956146836015,17.2521847832825,17.1184835927512,14.3537329632698,18.9434158460334,15.0693827358406,15.4381926836277,25.1264338626582,21.6020209418353,31.289275476869,22.9155865796504,22.5302638356962,26.9685074481323,23.3282768068293,26.7333097565184,27.5861502185834,26.7972274475018,27.7451297464028,26.7097202986653,25.2120073524208,27.0493739547427,13.5712155545345,13.053736411649,15.7364567366092,22.3508764506833,22.4770825982909,25.3177243039159,17.5410391553043,14.6433137778536,25.5561657727168,23.8167634020949,25.8508077279359,28.1983181584011,25.8446461935577,27.4584234865167,29.1463705205924,21.6269334854371,20.5549644532192,23.1351347823701,24.6975748262387,23.6827252877449,23.9443830249757,27.8799507823585,26.5490276679926,23.3069410708782,18.1394134178851,14.8998013007159,16.5369060013233,17.5238034328039,26.1012576099903,25.4473610634254,23.1723295950069,19.5942789920206,11.5960469432499,27.8465966770104,26.2138496430417,24.4883087882582,24.4487912349406,21.2193664681276,24.4729522426338,24.4365280114837,18.9231373692439,23.7482660309387,22.2938122660525,18.2175580942885,22.0528398054962,18.7970328353287,18.729873496725,22.2554692984895,22.9194900486022,21.338316966858,23.0269860937582,20.3967832211561,30.7567585436135,23.5281029478074,25.1864557222808,40.4992182560086,40.8715740885865,39.3498457915219,23.2870449091582,23.7917468950219,26.5343949704494,11.4560474161814,23.09252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| |||
|short_description=p1@Tubgcp3 | |||
}} |
Revision as of 03:13, 6 August 2015
Short description: | p1@Tubgcp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubgcp3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000164774, ENSMUST00000167547, NM_198031, uc009kwd.1, uc009kwe.1, uc012fzo.1_5end |
EntrezGene: | 259279 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 4.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.70e-10 | 29 |
immune organ | 5.70e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.86e-09 | 35 |
respiratory system | 2.88e-08 | 42 |
respiratory tract | 4.99e-08 | 41 |
gland of gut | 1.18e-07 | 24 |
thymus | 2.02e-07 | 23 |
neck | 2.02e-07 | 23 |
respiratory system epithelium | 2.02e-07 | 23 |
hemolymphoid system gland | 2.02e-07 | 23 |
pharyngeal epithelium | 2.02e-07 | 23 |
thymic region | 2.02e-07 | 23 |
pharyngeal gland | 2.02e-07 | 23 |
entire pharyngeal arch endoderm | 2.02e-07 | 23 |
thymus primordium | 2.02e-07 | 23 |
early pharyngeal endoderm | 2.02e-07 | 23 |