FFCP PHASE1:Mm9::chr13:56804798..56804806,+: Difference between revisions
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{{FFCP|EntrezGene=17129|HGNC=|UniProt=P97454|association_with_transcript=-222bp_to_ENSMUST00000109874,NM_001164042,uc007qta.2_5end|description=CAGE_peak_7_at_Smad5_5end|id=chr13:56804798..56804806,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,1.13e-15,6;CL:0002608,1.34e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!4.07e-07!9;UBERON:0000019!4.07e-07!9;UBERON:0000047!4.07e-07!9;UBERON:0004088!4.07e-07!9;UBERON:0002104!4.07e-07!9;UBERON:0001456!4.07e-07!9;UBERON:0003072!4.07e-07!9;UBERON:0003071!4.07e-07!9;UBERON:0004128!4.07e-07!9;UBERON:0000020!7.40e-07!12;UBERON:0001032!7.40e-07!12;UBERON:0004456!7.40e-07!12|ontology_enrichment_uberon_v019_2=|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,0.135005938331691,0.420649922702764,0,0,0.857435594504678,1.34183659425531,0,0,0,0.153606533256243,0.659431438650969,0.182975287204819,0.52091337055676,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0.255715457330331,0,0,0.407357455401265,0,0.252722758433675,0.420883711772948,0.260240885925407,0.689706313300419,0.540186389416048,0.30140963567143,0.476255494059295,0.512454881139399,0.468508622798644,0.517406741478031,0,0.756424320671277,0.351902248327898,0.43839146485515,0,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0.315270288212382,0,0.637819074629948,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.49465875882444,0,0.241251699712623,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,1.12738587736838,0,0.330916980914195,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.726511433089237,0,0.512200817262403,0,0,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0.231867835620421|short_description=p7@Smad5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17129 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97454 | |||
|association_with_transcript=-222bp_to_ENSMUST00000109874,NM_001164042,uc007qta.2_5end | |||
|cluster_id=chr13:56804798..56804806,+ | |||
|description=CAGE_peak_7_at_Smad5_5end | |||
|id=chr13:56804798..56804806,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.13e-15,6;CL:0002608,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.07e-07!9;UBERON:0000019!4.07e-07!9;UBERON:0000047!4.07e-07!9;UBERON:0004088!4.07e-07!9;UBERON:0002104!4.07e-07!9;UBERON:0001456!4.07e-07!9;UBERON:0003072!4.07e-07!9;UBERON:0003071!4.07e-07!9;UBERON:0004128!4.07e-07!9;UBERON:0000020!7.40e-07!12;UBERON:0001032!7.40e-07!12;UBERON:0004456!7.40e-07!12 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,0.135005938331691,0.420649922702764,0,0,0.857435594504678,1.34183659425531,0,0,0,0.153606533256243,0.659431438650969,0.182975287204819,0.52091337055676,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0.255715457330331,0,0,0.407357455401265,0,0.252722758433675,0.420883711772948,0.260240885925407,0.689706313300419,0.540186389416048,0.30140963567143,0.476255494059295,0.512454881139399,0.468508622798644,0.517406741478031,0,0.756424320671277,0.351902248327898,0.43839146485515,0,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0.315270288212382,0,0.637819074629948,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.49465875882444,0,0.241251699712623,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,1.12738587736838,0,0.330916980914195,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.726511433089237,0,0.512200817262403,0,0,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p7@Smad5 | |||
}} |
Revision as of 04:41, 6 August 2015
Short description: | p7@Smad5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Smad5_5end |
Coexpression cluster: | NA |
Association with transcript: | -222bp_to_ENSMUST00000109874, NM_001164042, uc007qta.2_5end |
EntrezGene: | 17129 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.13e-15 | 6 |
hippocampal neuron | 1.34e-08 | 3 |