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FFCP PHASE1:Mm9::chr8:14888877..14888900,+: Difference between revisions

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{{FFCP|EntrezGene=26889|HGNC=|UniProt=D3Z3T9|association_with_transcript=-103bp_to_ENSMUST00000133578_5end|description=CAGE_peak_3_at_Cln8_5end|id=chr8:14888877..14888900,+|ontology_enrichment_celltype=CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0002319!2.03e-07!43;CL:0000540!7.71e-07!33;CL:0000047!7.71e-07!33;CL:0000031!7.71e-07!33;CL:0000404!7.71e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,1.97e-07,44;CL:0000133,1.97e-07,44;CL:0002319,2.10e-07,43;CL:0000540,7.59e-07,33;CL:0000047,7.59e-07,33;CL:0000031,7.59e-07,33;CL:0000404,7.59e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.41e-13!75;UBERON:0001016!1.41e-13!75;UBERON:0004121!2.93e-13!102;UBERON:0000924!2.93e-13!102;UBERON:0006601!2.93e-13!102;UBERON:0001017!1.62e-12!73;UBERON:0005743!1.62e-12!73;UBERON:0002346!8.51e-08!71;UBERON:0003075!8.51e-08!71;UBERON:0007284!8.51e-08!71;UBERON:0000033!1.08e-07!63;UBERON:0001049!1.47e-07!52;UBERON:0005068!1.47e-07!52;UBERON:0006241!1.47e-07!52;UBERON:0007135!1.47e-07!52;UBERON:0000955!2.88e-07!50;UBERON:0006238!2.88e-07!50;UBERON:0002616!4.86e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.39e-14,95;UBERON:0000924,7.39e-14,95;UBERON:0006601,7.39e-14,95;UBERON:0001016,1.62e-13,75;UBERON:0001017,1.85e-12,73;UBERON:0002346,2.35e-08,64;UBERON:0003075,2.35e-08,64;UBERON:0007284,2.35e-08,64;UBERON:0000073,4.34e-08,54;UBERON:0010371,7.25e-08,73;UBERON:0001049,1.66e-07,52;UBERON:0005068,1.66e-07,52;UBERON:0006241,1.66e-07,52;UBERON:0007135,1.66e-07,52|phase1_expression=2.40223270657191,3.48975407639361,1.81999695755814,1.20985684522732,0.500895729946347,1.34303417529512,1.63528848416868,0.903863264091034,0.703943610758334,1.17032263160997,2.05461561870606,1.91453181588807,1.19840510951844,1.48614684112296,1.33243904726265,3.64455481301687,6.99561878128147,0.630924330716475,0.959801035240171,0.42438965179803,1.53077922271926,0.695036658406197,0.522399578277871,1.27993938234725,1.83527424853736,1.72269589234506,3.01533397311352,0.646413698057667,0.570070258369122,0.252030129759931,1.77384408524244,3.81018404075779,3.07532393792285,0,0.866554859253824,1.32987716286794,1.02084678131185,0.418531630736908,1.5626706890476,2.09409497589519,0.588231488031014,0,0.485510353031154,1.51076181570693,1.52065396829272,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,2.52758868796568,2.2397827460058,4.31257693094915,0,2.17608642603403,1.68046899571232,1.02903774414379,2.29226751951005,0,3.64169629547276,5.28990979272033,6.33831403506179,2.37191172448392,0.889294796111139,11.2487464660175,3.9554654502679,12.7886420690298,4.79360176829448,6.91592949578798,1.65903379693564,2.56511282830212,2.3135745748652,5.71301968807607,3.53389665522582,3.67472397644862,2.1086003624012,4.5960939330501,5.50579404996943,3.31987079021488,3.5329502648936,3.82470234417562,3.38504281328916,3.12548022334056,2.51264699101243,2.8138130501584,4.12555268997387,3.53554302568401,2.27794689278565,2.60959224155421,7.72407171998477,4.53429360640713,1.73918693221007,3.44169550792555,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,2.52799956237153,2.38602451609281,1.81850203222008,1.7666978725517,2.53518155598025,1.28326477414318,0,0,1.94841936910093,1.01343946190039,0,2.16949371466214,1.8125651855302,2.22663208597237,2.08182392119363,1.21786191324856,2.07553947530453,2.56228488939458,2.11659672844269,3.51866455723091,5.6854842578906,2.74738778147832,2.65383165584962,3.558870698843,2.87093973998512,3.39412677194655,5.59175283654366,4.68449275218475,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,2.54140454146129,4.19413790333504,5.03250663100489,3.39266750704734,3.99795936442236,2.81287003063364,5.81806524766768,5.67844420737152,2.95334155165917,2.23932547098167,1.76905930903572,4.41927897361595,1.69156575851515,2.75882525320168,3.42118046630164,2.41127708537144,1.7009124787832,2.562274405697,2.71735001223214,3.62184719034622,3.44908788692548,2.64748512234947,2.28736461413134,2.84954452155847,1.94633074457919,3.83077383174383,3.49829631893504,2.18937693500343,5.61770549850588,1.80143534980301,0.852490498186778,2.89976081549703,2.11073453982987,2.52086886045421,2.60419209143731,1.77087808572663,1.07986979021165,0.697601834251224,2.14618721119695,2.33530684734339,1.81015834904829,1.47750717671186,2.02672023864639,2.04679982395465,3.51280184465681,3.48936688776967,2.94405927989778,3.91037527041281,0.330418782983798,2.3800550999719,1.2797295032114,1.85789337488351,1.80414445850931,2.62188582010345,1.33426826306922,1.71203063501303,2.37264530772256,2.63518327558417,3.01602250560323,1.59165177632921,1.55971269695296,0.898819408654221,2.37751854862164,0.995706366271836,2.27601481143698,2.28497025219458,2.25415471346161,1.62921062276251,2.71533482034676,1.96380295692892,1.89709611372772,1.91893192373483,1.56998727841375,2.46794327843601,3.55743152504579,2.33583148002532,2.94838492669805,4.72210436008193,3.24576194221605,5.30589751455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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:26889
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:D3Z3T9
|association_with_transcript=-103bp_to_ENSMUST00000133578_5end
|cluster_id=chr8:14888877..14888900,+
|description=CAGE_peak_3_at_Cln8_5end
|id=chr8:14888877..14888900,+
|ontology_enrichment_celltype=CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0002319!2.03e-07!43;CL:0000540!7.71e-07!33;CL:0000047!7.71e-07!33;CL:0000031!7.71e-07!33;CL:0000404!7.71e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000221,1.97e-07,44;CL:0000133,1.97e-07,44;CL:0002319,2.10e-07,43;CL:0000540,7.59e-07,33;CL:0000047,7.59e-07,33;CL:0000031,7.59e-07,33;CL:0000404,7.59e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.39e-14,95;UBERON:0000924,7.39e-14,95;UBERON:0006601,7.39e-14,95;UBERON:0001016,1.62e-13,75;UBERON:0001017,1.85e-12,73;UBERON:0002346,2.35e-08,64;UBERON:0003075,2.35e-08,64;UBERON:0007284,2.35e-08,64;UBERON:0000073,4.34e-08,54;UBERON:0010371,7.25e-08,73;UBERON:0001049,1.66e-07,52;UBERON:0005068,1.66e-07,52;UBERON:0006241,1.66e-07,52;UBERON:0007135,1.66e-07,52
|phase1_expression=2.40223270657191,3.48975407639361,1.81999695755814,1.20985684522732,0.500895729946347,1.34303417529512,1.63528848416868,0.903863264091034,0.703943610758334,1.17032263160997,2.05461561870606,1.91453181588807,1.19840510951844,1.48614684112296,1.33243904726265,3.64455481301687,6.99561878128147,0.630924330716475,0.959801035240171,0.42438965179803,1.53077922271926,0.695036658406197,0.522399578277871,1.27993938234725,1.83527424853736,1.72269589234506,3.01533397311352,0.646413698057667,0.570070258369122,0.252030129759931,1.77384408524244,3.81018404075779,3.07532393792285,0,0.866554859253824,1.32987716286794,1.02084678131185,0.418531630736908,1.5626706890476,2.09409497589519,0.588231488031014,0,0.485510353031154,1.51076181570693,1.52065396829272,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,2.52758868796568,2.2397827460058,4.31257693094915,0,2.17608642603403,1.68046899571232,1.02903774414379,2.29226751951005,0,3.64169629547276,5.28990979272033,6.33831403506179,2.37191172448392,0.889294796111139,11.2487464660175,3.9554654502679,12.7886420690298,4.79360176829448,6.91592949578798,1.65903379693564,2.56511282830212,2.3135745748652,5.71301968807607,3.53389665522582,3.67472397644862,2.1086003624012,4.5960939330501,5.50579404996943,3.31987079021488,3.5329502648936,3.82470234417562,3.38504281328916,3.12548022334056,2.51264699101243,2.8138130501584,4.12555268997387,3.53554302568401,2.27794689278565,2.60959224155421,7.72407171998477,4.53429360640713,1.73918693221007,3.44169550792555,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,2.52799956237153,2.38602451609281,1.81850203222008,1.7666978725517,2.53518155598025,1.28326477414318,0,0,1.94841936910093,1.01343946190039,0,2.16949371466214,1.8125651855302,2.22663208597237,2.08182392119363,1.21786191324856,2.07553947530453,2.56228488939458,2.11659672844269,3.51866455723091,5.6854842578906,2.74738778147832,2.65383165584962,3.558870698843,2.87093973998512,3.39412677194655,5.59175283654366,4.68449275218475,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,2.54140454146129,4.19413790333504,5.03250663100489,3.39266750704734,3.99795936442236,2.81287003063364,5.81806524766768,5.67844420737152,2.95334155165917,2.23932547098167,1.76905930903572,4.41927897361595,1.69156575851515,2.75882525320168,3.42118046630164,2.41127708537144,1.7009124787832,2.562274405697,2.71735001223214,3.62184719034622,3.44908788692548,2.64748512234947,2.28736461413134,2.84954452155847,1.94633074457919,3.83077383174383,3.49829631893504,2.18937693500343,5.61770549850588,1.80143534980301,0.852490498186778,2.89976081549703,2.11073453982987,2.52086886045421,2.60419209143731,1.77087808572663,1.07986979021165,0.697601834251224,2.14618721119695,2.33530684734339,1.81015834904829,1.47750717671186,2.02672023864639,2.04679982395465,3.51280184465681,3.48936688776967,2.94405927989778,3.91037527041281,0.330418782983798,2.3800550999719,1.2797295032114,1.85789337488351,1.80414445850931,2.62188582010345,1.33426826306922,1.71203063501303,2.37264530772256,2.63518327558417,3.01602250560323,1.59165177632921,1.55971269695296,0.898819408654221,2.37751854862164,0.995706366271836,2.27601481143698,2.28497025219458,2.25415471346161,1.62921062276251,2.71533482034676,1.96380295692892,1.89709611372772,1.91893192373483,1.56998727841375,2.46794327843601,3.55743152504579,2.33583148002532,2.94838492669805,4.72210436008193,3.24576194221605,5.30589751455317,5.34714288740982,3.45235364940973,3.24270453550071,3.0201755450689,1.43768206527355,4.83783231969054,2.18426371180192,4.04126204715379,3.22915344339442,2.41221760681684,1.84753190166605,3.41084541186873,1.95557971730431,1.18821560042632,1.87752198630802,1.67506257441816,1.6663054862021,2.34160377429359,2.36452716159286,1.55025282754142,2.23236676120482,2.29408640602033,2.76295970985433,2.60368305446721,10.5553898757491,5.4390568381871,2.95058563811422,3.86311444826625,4.33486592967038,4.33683240391152,2.13115428989678,2.7771801992481,2.2085575359138,3.12350995437311,2.58508077279359,3.34556317133573,2.89638276307112,5.09537755419898,3.23848561339915,1.16902343164525,2.76701444562566,3.21321316421807,3.12268187458191,2.49291845134157,2.93196526836437,2.63952196756057,2.65490276679926,1.21390318077491,0.906970670894253,1.13163047853539,1.18120757152309,2.15204603560749,2.32585463851399,2.54473610634254,1.42598951353889,1.8962205476149,2.10837217149998,0,4.76615448055303,1.98067203434441,2.32845630808958,2.57204442037911,1.77340233642274,2.67553226403106,3.29098041204242,2.13125464380219,3.28540391289194,3.1774810629573,2.64634077665954,1.6488625294148,1.93757312035087,1.86970067277283,2.626191568069,1.31312719796049,0.874442509889552,5.37733375830478,3.07567585436135,3.92135049130123,1.48155621895769,3.20226376907975,2.1871076435364,3.66045077130436,2.03974115992626,2.23922323717853,1.93479963326193,0.954670618015114,2.37251995185852,2.03319467126849,1.29606408986162,2.29997125615916,1.09181281873089,1.34864346384821,1.98368293740806,3.40282724579238,0.90730481304255,3.10669656543463,0,2.39226473670366,1.82004339502807,1.94451188344048,2.19571699912143,2.19642963138012,2.93393096614385,3.25510962109875,1.67774951081137,1.44950472495604,0.288030006257865,3.16011120628178,2.8381530140623,1.02710957164827,1.03936658382236,1.43221356533985,2.18549490259391,1.68273629327956,1.62458479892035,1.61546319917036,1.98137697303,1.91569751759997,2.14407337627455,1.92423683280659,2.22066114144981,1.13365191807606,2.21985953374065,1.61484941897056,1.17519231454855,3.67060228661162,2.62755465631655,2.56412273974171,1.2862102744744,1.00314420807073,2.25900737046827,5.06357760157895,2.29158205375759,1.71853182343688,2.74033007908257,3.0215755895588,4.05013500139084,4.5032120322422,0.906284817968409,2.07104124700728,1.55681021376265,1.59609949360412,3.58540572083682,2.43106717068294,1.04806581313991,2.02227859295016,2.00022055021454,2.47242068686673,0.64183841918363,2.27427490587418,1.2673964994512,3.2066478035633,2.43467919421694,2.30490548657529,1.78049953762401,0.952587382566147,2.66533949673168,2.70072908649187,1.64834360321323,1.47198920134397,0.342869252385415,3.01708870470874,1.90748951957857,1.45346416632329,1.50575008664529,2.62305284464197,1.09756783723664,1.31534855718921,2.30866993537965,0.561142271657738,2.25406534435931,2.26560309463796,2.45538625901814,2.16911577660352,0.964533054905707,3.74715866906919,3.27504251823572,2.79332370262788,2.67803664896381,3.30887128679273,2.08681052058379
|short_description=p3@Cln8
}}

Revision as of 05:18, 6 August 2015

Short description:p3@Cln8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cln8_5end
Coexpression cluster:NA
Association with transcript: -103bp_to_ENSMUST00000133578_5end
EntrezGene:26889
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Cln8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D97.72
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.97e-0744
neurectodermal cell1.97e-0744
neural cell2.10e-0743
neuron7.59e-0733
neuronal stem cell7.59e-0733
neuroblast7.59e-0733
electrically signaling cell7.59e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure7.39e-1495
ectoderm7.39e-1495
presumptive ectoderm7.39e-1495
nervous system1.62e-1375
central nervous system1.85e-1273
neurectoderm2.35e-0864
neural plate2.35e-0864
presumptive neural plate2.35e-0864
regional part of nervous system4.34e-0854
ecto-epithelium7.25e-0873
neural tube1.66e-0752
neural rod1.66e-0752
future spinal cord1.66e-0752
neural keel1.66e-0752
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