FFCP PHASE1:Hg19::chr3:149193514..149193525,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11856 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 21:35, 15 September 2015
| Short description: | p5@TM4SF4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_TM4SF4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -45bp_to_ENST00000463068_5end |
| EntrezGene: | TM4SF4 |
| HGNC: | 11856 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@TM4SF4 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| liver | 3.62e-09 | 19 |
| digestive gland | 3.62e-09 | 19 |
| liver bud | 3.62e-09 | 19 |
| hepatic diverticulum | 5.39e-08 | 22 |
| liver primordium | 5.39e-08 | 22 |
| digestive tract diverticulum | 1.14e-07 | 23 |
| duodenum | 2.47e-07 | 2 |
| epithelial sac | 4.23e-07 | 25 |
| epithelium of foregut-midgut junction | 4.23e-07 | 25 |
| anatomical boundary | 4.23e-07 | 25 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| clear cell adenocarcinoma | 3.94e-37 | 2 |
| basal cell carcinoma | 2.71e-19 | 1 |
| signet ring cell adenocarcinoma | 1.57e-10 | 2 |
| skin carcinoma | 2.49e-10 | 2 |
| skin cancer | 2.49e-10 | 2 |
| integumentary system cancer | 2.49e-10 | 2 |
| carcinoma | 5.15e-08 | 106 |
| adenocarcinoma | 3.49e-07 | 25 |
Showing 1 to 8 of 8 entries
