FFCP PHASE2:Hg19::chr10:105036887..105036903,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9118 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6057 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6057 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q16352 | ||
|association_with_transcript=-16bp_to_ENST00000369849,NM_032727,uc001kws.2,uc009xxj.2_5end | |association_with_transcript=-16bp_to_ENST00000369849,NM_032727,uc001kws.2,uc009xxj.2_5end | ||
|cluster_id=chr10:105036887..105036903,+ | |cluster_id=chr10:105036887..105036903,+ |
Latest revision as of 03:06, 16 September 2015
Short description: | p1@INA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INA_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -16bp_to_ENST00000369849, NM_032727, uc001kws.2, uc009xxj.2_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q16352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@INA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neurectodermal cell | 4.28e-08 | 59 |
neural cell | 1.21e-07 | 25 |
neuronal stem cell | 3.39e-07 | 8 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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nervous system | 3.93e-49 | 89 |
central nervous system | 2.11e-44 | 81 |
neural tube | 1.77e-42 | 56 |
neural rod | 1.77e-42 | 56 |
future spinal cord | 1.77e-42 | 56 |
neural keel | 1.77e-42 | 56 |
ectoderm-derived structure | 1.92e-41 | 171 |
ectoderm | 1.92e-41 | 171 |
presumptive ectoderm | 1.92e-41 | 171 |
regional part of nervous system | 3.43e-40 | 53 |
Showing 1 to 10 of 64 entries
Ontology term | p-value | n |
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germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |
Showing 1 to 2 of 2 entries