FFCP PHASE2:Hg19::chr9:136568685..136568722,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1757 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10536 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10536 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5SYV2 | ||
|association_with_transcript=100bp_to_ENST00000371868,uc004cen.2_5end | |association_with_transcript=100bp_to_ENST00000371868,uc004cen.2_5end | ||
|cluster_id=chr9:136568685..136568722,- | |cluster_id=chr9:136568685..136568722,- |
Latest revision as of 07:39, 16 September 2015
Short description: | p4@SARDH |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SARDH_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 100bp_to_ENST00000371868, uc004cen.2_5end |
EntrezGene: | SARDH |
HGNC: | 10536 |
UniProt: | Q5SYV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SARDH |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 5.70e-21 | 2 |
precursor B cell | 1.60e-14 | 3 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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hematologic cancer | 4.06e-13 | 51 |
immune system cancer | 4.06e-13 | 51 |
leukemia | 6.08e-10 | 39 |
Showing 1 to 3 of 3 entries