FFCP PHASE2:Hg19::chr2:110873422..110873434,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7851 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6818 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6818 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8WE57 | ||
|association_with_transcript=-24bp_to_ENST00000424988_5end | |association_with_transcript=-24bp_to_ENST00000424988_5end | ||
|cluster_id=chr2:110873422..110873434,- | |cluster_id=chr2:110873422..110873434,- |
Latest revision as of 07:39, 16 September 2015
Short description: | p2@MALL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MALL_5end |
Coexpression cluster: | C4117_Urothelial_small_Corneal_tubular_Smooth_cervical_pharyngeal |
Association with transcript: | -24bp_to_ENST00000424988_5end |
EntrezGene: | MALL |
HGNC: | 6818 |
UniProt: | F8WE57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@MALL |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.41e-19 | 253 |
endothelial cell | 1.37e-15 | 36 |
meso-epithelial cell | 5.45e-15 | 45 |
endothelial cell of vascular tree | 2.40e-13 | 24 |
blood vessel endothelial cell | 1.50e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-11 | 18 |
squamous epithelial cell | 1.62e-11 | 63 |
kidney cell | 1.64e-10 | 17 |
kidney epithelial cell | 1.64e-10 | 17 |
embryonic cell | 1.78e-10 | 250 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
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epithelial tube | 1.61e-16 | 117 |
anatomical conduit | 5.96e-14 | 240 |
simple squamous epithelium | 1.47e-13 | 22 |
trunk region element | 6.04e-12 | 101 |
vessel | 6.99e-12 | 68 |
epithelium | 7.22e-12 | 306 |
squamous epithelium | 1.16e-11 | 25 |
blood vessel endothelium | 1.50e-11 | 18 |
endothelium | 1.50e-11 | 18 |
cardiovascular system endothelium | 1.50e-11 | 18 |
Showing 1 to 10 of 65 entries