FFCP PHASE2:Hg19::chr5:176943630..176943646,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:51428 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18674 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=51428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18674 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 07:13, 17 September 2015
| Short description: | p7@DDX41 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_DDX41_5end |
| Coexpression cluster: | C2471_basal_Smooth_mucinous_Chondrocyte_H9_Cardiac_Sertoli |
| Association with transcript: | -305bp_to_ENST00000504781_5end |
| EntrezGene: | DDX41 |
| HGNC: | 18674 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@DDX41 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 3.72e-21 | 32 |
| smooth muscle cell | 1.09e-14 | 43 |
| smooth muscle myoblast | 1.09e-14 | 43 |
| muscle precursor cell | 5.58e-13 | 58 |
| myoblast | 5.58e-13 | 58 |
| multi-potent skeletal muscle stem cell | 5.58e-13 | 58 |
| muscle cell | 3.00e-12 | 55 |
| aortic smooth muscle cell | 4.72e-11 | 10 |
| electrically responsive cell | 1.25e-10 | 61 |
| electrically active cell | 1.25e-10 | 61 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| systemic artery | 1.08e-17 | 33 |
| systemic arterial system | 1.08e-17 | 33 |
| artery | 3.37e-17 | 42 |
| arterial blood vessel | 3.37e-17 | 42 |
| arterial system | 3.37e-17 | 42 |
| splanchnic layer of lateral plate mesoderm | 1.32e-12 | 83 |
| epithelial tube open at both ends | 1.38e-12 | 59 |
| blood vessel | 1.38e-12 | 59 |
| blood vasculature | 1.38e-12 | 59 |
| vascular cord | 1.38e-12 | 59 |
Showing 1 to 10 of 42 entries
