FFCP PHASE2:Hg19::chr2:44588649..44588667,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9581 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30228 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30228 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q4J6C6 | ||
|association_with_transcript=-16bp_to_ENST00000409936_5end | |association_with_transcript=-16bp_to_ENST00000409936_5end | ||
|cluster_id=chr2:44588649..44588667,- | |cluster_id=chr2:44588649..44588667,- | ||
Latest revision as of 09:10, 17 September 2015
| Short description: | p3@PREPL |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PREPL_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -16bp_to_ENST00000409936_5end |
| EntrezGene: | PREPL |
| HGNC: | 30228 |
| UniProt: | Q4J6C6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@PREPL |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 6.75e-32 | 89 |
| central nervous system | 3.13e-29 | 81 |
| neural tube | 5.32e-28 | 56 |
| neural rod | 5.32e-28 | 56 |
| future spinal cord | 5.32e-28 | 56 |
| neural keel | 5.32e-28 | 56 |
| brain | 1.09e-26 | 68 |
| future brain | 1.09e-26 | 68 |
| regional part of nervous system | 3.11e-26 | 53 |
| regional part of brain | 3.11e-26 | 53 |
Showing 1 to 10 of 42 entries
