FFCP PHASE2:Hg19::chr8:23564065..23564087,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:137814 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32940 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=137814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=32940 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JML6 | ||
|association_with_transcript=-143bp_to_ENST00000418222,uc011kzy.1_5end | |association_with_transcript=-143bp_to_ENST00000418222,uc011kzy.1_5end | ||
|cluster_id=chr8:23564065..23564087,- | |cluster_id=chr8:23564065..23564087,- | ||
Latest revision as of 14:43, 17 September 2015
| Short description: | p1@NKX2-6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NKX2-6_5end |
| Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
| Association with transcript: | -143bp_to_ENST00000418222, uc011kzy.1_5end |
| EntrezGene: | NKX2-6 |
| HGNC: | 32940 |
| UniProt: | C9JML6 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@NKX2-6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| skin fibroblast | 8.20e-28 | 23 |
| fibroblast | 8.32e-14 | 76 |
| Schwann cell | 2.54e-12 | 2 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| skin of body | 9.93e-19 | 41 |
| integument | 1.58e-16 | 46 |
| integumental system | 1.58e-16 | 46 |
| surface structure | 2.11e-08 | 99 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 6.88e-27 | 5 |
| myotonic disease | 6.88e-27 | 5 |
| muscle tissue disease | 6.88e-27 | 5 |
| myopathy | 6.88e-27 | 5 |
| muscular disease | 6.88e-27 | 5 |
| myotonic dystrophy | 6.88e-27 | 5 |
| organ system benign neoplasm | 3.74e-10 | 1 |
| skin benign neoplasm | 3.74e-10 | 1 |
| integumentary system benign neoplasm | 3.74e-10 | 1 |
| dermis tumor | 3.74e-10 | 1 |
Showing 1 to 10 of 11 entries
