FFCP PHASE2:Hg19::chr20:9495263..9495313,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:24141 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16097 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16097 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UJQ1 | ||
|association_with_transcript=0bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=0bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495263..9495313,+ | |cluster_id=chr20:9495263..9495313,+ |
Latest revision as of 17:34, 17 September 2015
Short description: | p3@LAMP5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMP5_5end |
Coexpression cluster: | C2627_biphenotypic_acute_putamen_caudate_Dendritic_hippocampus_amygdala |
Association with transcript: | 0bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@LAMP5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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plasmacytoid dendritic cell | 2.38e-10 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
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neural tube | 5.01e-65 | 56 |
neural rod | 5.01e-65 | 56 |
future spinal cord | 5.01e-65 | 56 |
neural keel | 5.01e-65 | 56 |
regional part of nervous system | 5.04e-62 | 53 |
regional part of brain | 5.04e-62 | 53 |
telencephalon | 1.30e-52 | 34 |
cerebral hemisphere | 2.60e-52 | 32 |
brain | 3.27e-51 | 68 |
future brain | 3.27e-51 | 68 |
Showing 1 to 10 of 73 entries