FFCP PHASE2:Hg19::chr11:44117242..44117253,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2132 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3513 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3513 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JU51,E9PNL9 | ||
|association_with_transcript=-13bp_to_,13bp_to_ENST00000358681,ENST00000527014_5end | |association_with_transcript=-13bp_to_,13bp_to_ENST00000358681,ENST00000527014_5end | ||
|cluster_id=chr11:44117242..44117253,+ | |cluster_id=chr11:44117242..44117253,+ |
Latest revision as of 00:03, 18 September 2015
Short description: | p3@EXT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EXT2_5end |
Coexpression cluster: | C2131_Smooth_Fibroblast_gall_leiomyoma_bone_Chondrocyte_mesenchymal |
Association with transcript: | -13bp_to_, 13bp_to_ENST00000358681, ENST00000527014_5end |
EntrezGene: | EXT2 |
HGNC: | 3513 |
UniProt: | C9JU51E9PNL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@EXT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 1.07e-21 | 250 |
mesodermal cell | 1.46e-17 | 121 |
fibroblast | 2.70e-16 | 76 |
muscle precursor cell | 3.91e-13 | 58 |
myoblast | 3.91e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.91e-13 | 58 |
vascular associated smooth muscle cell | 3.99e-13 | 32 |
muscle cell | 3.14e-12 | 55 |
smooth muscle cell | 1.34e-11 | 43 |
smooth muscle myoblast | 1.34e-11 | 43 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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vasculature | 4.16e-17 | 78 |
vascular system | 4.16e-17 | 78 |
mesenchyme | 1.96e-16 | 160 |
entire embryonic mesenchyme | 1.96e-16 | 160 |
vessel | 3.15e-16 | 68 |
epithelial tube | 1.74e-15 | 117 |
epithelial tube open at both ends | 1.01e-14 | 59 |
blood vessel | 1.01e-14 | 59 |
blood vasculature | 1.01e-14 | 59 |
vascular cord | 1.01e-14 | 59 |
Showing 1 to 10 of 46 entries