FFCP PHASE2:Hg19::chr1:45140360..45140399,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:339541 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:34345 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=339541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=34345 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J477,C9JCY2,C9J579,F8WDG2,Q6PIY5 | ||
|association_with_transcript=0bp_to_ENST00000357508,ENST00000418644,ENST00000424484,ENST00000441519,ENST00000445071,ENST00000455805,ENST00000458657,ENST00000535358,NM_001145636,uc001cmf.2_5end | |association_with_transcript=0bp_to_ENST00000357508,ENST00000418644,ENST00000424484,ENST00000441519,ENST00000445071,ENST00000455805,ENST00000458657,ENST00000535358,NM_001145636,uc001cmf.2_5end | ||
|cluster_id=chr1:45140360..45140399,+ | |cluster_id=chr1:45140360..45140399,+ |
Latest revision as of 06:28, 18 September 2015
Short description: | p2@C1orf228 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf228_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | 0bp_to_ENST00000357508, ENST00000418644, ENST00000424484, ENST00000441519, ENST00000445071, ENST00000455805, ENST00000458657, ENST00000535358, NM_001145636, uc001cmf.2_5end |
EntrezGene: | C1orf228 |
HGNC: | 34345 |
UniProt: | C9J477C9JCY2C9J579F8WDG2Q6PIY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@C1orf228 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 1.99e-60 | 56 |
neural rod | 1.99e-60 | 56 |
future spinal cord | 1.99e-60 | 56 |
neural keel | 1.99e-60 | 56 |
regional part of nervous system | 8.32e-58 | 53 |
regional part of brain | 8.32e-58 | 53 |
brain | 6.03e-52 | 68 |
future brain | 6.03e-52 | 68 |
central nervous system | 3.67e-50 | 81 |
neural plate | 3.28e-48 | 82 |
Showing 1 to 10 of 69 entries