FFCP PHASE2:Hg19::chr12:42877408..42877422,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:144165 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17019 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=144165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17019 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B3KVG3,Q96MT3 | ||
|association_with_transcript=0bp_to_ENST00000552240,NM_001144881,uc010skv.1_5end | |association_with_transcript=0bp_to_ENST00000552240,NM_001144881,uc010skv.1_5end | ||
|cluster_id=chr12:42877408..42877422,- | |cluster_id=chr12:42877408..42877422,- |
Latest revision as of 08:02, 18 September 2015
Short description: | p9@PRICKLE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRICKLE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000552240, NM_001144881, uc010skv.1_5end |
EntrezGene: | PRICKLE1 |
HGNC: | 17019 |
UniProt: | B3KVG3Q96MT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@PRICKLE1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.46e-13 | 2 |
kidney interstitial cell | 8.46e-13 | 2 |
juxtaglomerular complex cell | 8.46e-13 | 2 |
renal interstitial pericyte | 8.46e-13 | 2 |
extraglomerular mesangial cell | 8.46e-13 | 2 |
B cell | 4.04e-11 | 14 |
capillary endothelial cell | 1.98e-09 | 3 |
glomerular cell | 3.91e-08 | 7 |
kidney corpuscule cell | 3.91e-08 | 7 |
kidney cortical cell | 4.28e-08 | 12 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 8.46e-13 | 2 |
abdominal segment connective tissue | 8.46e-13 | 2 |
trunk connective tissue | 8.46e-13 | 2 |
interstitial tissue | 8.46e-13 | 2 |
extraglomerular mesangium | 8.46e-13 | 2 |
kidney interstitium | 8.46e-13 | 2 |
juxtaglomerular apparatus | 8.46e-13 | 2 |
mesangium | 8.46e-13 | 2 |
microcirculatory vessel | 1.98e-09 | 3 |
endothelium of capillary | 1.98e-09 | 3 |
Showing 1 to 10 of 36 entries