FFCP PHASE1:Hg19::chr19:4279282..4279293,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=56961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30633 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96IW2 | ||
|association_with_transcript=-365bp_to_AK055673_5end | |association_with_transcript=-365bp_to_AK055673_5end | ||
|cluster_id=chr19:4279282..4279293,+ | |cluster_id=chr19:4279282..4279293,+ |
Latest revision as of 08:38, 18 September 2015
Short description: | p11@SHD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SHD_5end |
Coexpression cluster: | C1241_neuroblastoma_small_Skeletal_Dendritic_Pericytes_merkel_mesenchymal |
Association with transcript: | -365bp_to_AK055673_5end |
EntrezGene: | SHD |
HGNC: | 30633 |
UniProt: | Q96IW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@SHD |
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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central nervous system pericyte | 2.72e-10 | 2 |
Merkel cell | 3.58e-10 | 2 |
cell of skeletal muscle | 3.92e-09 | 9 |
plasmacytoid dendritic cell | 3.16e-07 | 3 |
migratory neural crest cell | 5.04e-07 | 41 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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sympathetic nervous system | 4.31e-33 | 5 |
autonomic nervous system | 4.31e-33 | 5 |
peripheral nervous system | 9.79e-19 | 8 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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neuroendocrine tumor | 1.02e-27 | 6 |
neuroectodermal tumor | 6.19e-17 | 10 |
germ cell and embryonal cancer | 1.64e-13 | 22 |
germ cell cancer | 1.64e-13 | 22 |
Showing 1 to 4 of 4 entries