FFCP PHASE1:Hg19::chr3:48470838..48470867,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9103 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43157 | ||
|association_with_transcript=4bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end | |association_with_transcript=4bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end | ||
|cluster_id=chr3:48470838..48470867,- | |cluster_id=chr3:48470838..48470867,- | ||
Latest revision as of 13:57, 18 September 2015
| Short description: | p2@PLXNB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PLXNB1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 4bp_to_ENST00000358459, ENST00000358536, NM_002673, uc003csw.2_5end |
| EntrezGene: | PLXNB1 |
| HGNC: | 9103 |
| UniProt: | O43157 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@PLXNB1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.03e-11 | 253 |
| ecto-epithelial cell | 6.61e-09 | 34 |
| columnar/cuboidal epithelial cell | 3.41e-08 | 27 |
| embryonic cell | 4.39e-07 | 250 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 9.33e-19 | 171 |
| ectoderm | 9.33e-19 | 171 |
| presumptive ectoderm | 9.33e-19 | 171 |
| ecto-epithelium | 1.29e-17 | 104 |
| anatomical conduit | 9.97e-17 | 240 |
| neural plate | 5.04e-14 | 82 |
| presumptive neural plate | 5.04e-14 | 82 |
| tube | 5.47e-14 | 192 |
| adult organism | 1.08e-13 | 114 |
| central nervous system | 2.92e-13 | 81 |
Showing 1 to 10 of 36 entries
