FFCP PHASE2:Hg19::chr15:65914355..65914385,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9187 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10975 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10975 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H483 | ||
|association_with_transcript=8bp_to_ENST00000544319_5end | |association_with_transcript=8bp_to_ENST00000544319_5end | ||
|cluster_id=chr15:65914355..65914385,+ | |cluster_id=chr15:65914355..65914385,+ |
Latest revision as of 15:33, 18 September 2015
Short description: | p13@SLC24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC24A1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 8bp_to_ENST00000544319_5end |
EntrezGene: | SLC24A1 |
HGNC: | 10975 |
UniProt: | F5H483 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p13@SLC24A1 |
---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.61e-34 | 2 |
regional part of epithalamus | 3.61e-34 | 2 |
secretory circumventricular organ | 3.61e-34 | 2 |
circumventricular organ | 3.61e-34 | 2 |
epithalamus | 3.61e-34 | 2 |
gland of diencephalon | 7.35e-18 | 4 |
neuroendocrine gland | 7.35e-18 | 4 |
regional part of diencephalon | 7.35e-18 | 4 |
eye | 1.16e-13 | 21 |
visual system | 1.16e-13 | 21 |
Showing 1 to 10 of 18 entries