FFCP PHASE2:Hg19::chr19:50143346..50143409,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6237 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10447 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10447 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P10301 | ||
|association_with_transcript=0bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | |association_with_transcript=0bp_to_ENST00000246792,NM_006270,uc002pop.1_5end | ||
|cluster_id=chr19:50143346..50143409,- | |cluster_id=chr19:50143346..50143409,- |
Latest revision as of 08:23, 19 September 2015
Short description: | p1@RRAS |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RRAS_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000246792, NM_006270, uc002pop.1_5end |
EntrezGene: | RRAS |
HGNC: | 10447 |
UniProt: | P10301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@RRAS |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 4.57e-25 | 121 |
embryonic cell | 1.42e-18 | 250 |
smooth muscle cell | 1.25e-17 | 43 |
smooth muscle myoblast | 1.25e-17 | 43 |
muscle precursor cell | 1.72e-17 | 58 |
myoblast | 1.72e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-17 | 58 |
muscle cell | 1.98e-17 | 55 |
vascular associated smooth muscle cell | 3.09e-15 | 32 |
electrically responsive cell | 2.03e-13 | 61 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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epithelial tube | 2.45e-21 | 117 |
splanchnic layer of lateral plate mesoderm | 1.13e-20 | 83 |
mesenchyme | 3.32e-20 | 160 |
entire embryonic mesenchyme | 3.32e-20 | 160 |
vasculature | 5.66e-20 | 78 |
vascular system | 5.66e-20 | 78 |
epithelial vesicle | 5.88e-20 | 78 |
multilaminar epithelium | 8.26e-20 | 83 |
trunk | 3.42e-19 | 199 |
vessel | 5.68e-18 | 68 |
Showing 1 to 10 of 61 entries