FFCP PHASE1:Hg19::chr11:65769758..65769782,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17397 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 12:41, 19 September 2015
| Short description: | p5@BANF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_BANF1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -4bp_to_ENST00000524663_5end |
| EntrezGene: | BANF1 |
| HGNC: | 17397 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@BANF1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.94e-30 | 253 |
| squamous epithelial cell | 1.88e-12 | 63 |
| embryonic cell | 1.82e-11 | 250 |
| lining cell | 3.08e-09 | 58 |
| barrier cell | 3.08e-09 | 58 |
| epithelial cell of nephron | 4.20e-09 | 15 |
| kidney cell | 1.28e-08 | 17 |
| kidney epithelial cell | 1.28e-08 | 17 |
| endothelial cell | 7.37e-08 | 36 |
| kidney cortical cell | 1.50e-07 | 12 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| nephron epithelium | 4.20e-09 | 15 |
| renal tubule | 4.20e-09 | 15 |
| nephron tubule | 4.20e-09 | 15 |
| nephron | 4.20e-09 | 15 |
| uriniferous tubule | 4.20e-09 | 15 |
| nephrogenic mesenchyme | 4.20e-09 | 15 |
| excretory tube | 4.31e-08 | 16 |
| kidney epithelium | 4.31e-08 | 16 |
| cortex of kidney | 1.50e-07 | 12 |
| renal parenchyma | 1.50e-07 | 12 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 2.58e-20 | 235 |
| disease of cellular proliferation | 3.91e-20 | 239 |
| carcinoma | 2.34e-14 | 106 |
| cell type cancer | 4.22e-10 | 143 |
| organ system cancer | 1.18e-09 | 137 |
| hematologic cancer | 4.90e-08 | 51 |
| immune system cancer | 4.90e-08 | 51 |
| disease of anatomical entity | 4.52e-07 | 39 |
Showing 1 to 8 of 8 entries
