FFCP PHASE1:Hg19::chr1:201857798..201857813,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=149345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=27139 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96DD7 | ||
|association_with_transcript=0bp_to_ENST00000464117,NM_198149_5end | |association_with_transcript=0bp_to_ENST00000464117,NM_198149_5end | ||
|cluster_id=chr1:201857798..201857813,+ | |cluster_id=chr1:201857798..201857813,+ | ||
Latest revision as of 19:13, 19 September 2015
| Short description: | p2@SHISA4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SHISA4_5end |
| Coexpression cluster: | C1667_corpus_diaphragm_globus_tongue_diencephalon_optic_thalamus |
| Association with transcript: | 0bp_to_ENST00000464117, NM_198149_5end |
| EntrezGene: | SHISA4 |
| HGNC: | 27139 |
| UniProt: | Q96DD7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@SHISA4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 6.20e-32 | 114 |
| neural plate | 3.00e-30 | 82 |
| presumptive neural plate | 3.00e-30 | 82 |
| neural tube | 8.31e-29 | 56 |
| neural rod | 8.31e-29 | 56 |
| future spinal cord | 8.31e-29 | 56 |
| neural keel | 8.31e-29 | 56 |
| structure with developmental contribution from neural crest | 8.76e-29 | 132 |
| central nervous system | 8.70e-28 | 81 |
| brain | 1.43e-27 | 68 |
Showing 1 to 10 of 65 entries
