Personal tools

FFCP PHASE1:Hg19::chrX:144329020..144329026,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:494118
|EntrezGene=494118
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=HGNC:33174
|HGNC=33174
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q5VSR9
|UniProt=Q5VSR9
|association_with_transcript=-80bp_to_NM_001009614,uc004fcb.2_5end
|association_with_transcript=-80bp_to_NM_001009614,uc004fcb.2_5end
|cluster_id=chrX:144329020..144329026,+
|cluster_id=chrX:144329020..144329026,+

Latest revision as of 19:56, 19 September 2015

Short description:p1@SPANXN1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SPANXN1_5end
Coexpression cluster:C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular
Association with transcript: -80bp_to_NM_001009614, uc004fcb.2_5end
EntrezGene:SPANXN1
HGNC: 33174
UniProt: Q5VSR9
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data