FFCP PHASE2:Hg19::chrX:152770151..152770173,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:633 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:1044 |TSSclassifier=strong |...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=1044 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DQD6 | ||
|association_with_transcript=6bp_to_AK298756_5end | |association_with_transcript=6bp_to_AK298756_5end | ||
|cluster_id=chrX:152770151..152770173,+ | |cluster_id=chrX:152770151..152770173,+ | ||
Latest revision as of 23:43, 19 September 2015
| Short description: | p11@BGN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_BGN_5end |
| Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
| Association with transcript: | 6bp_to_AK298756_5end |
| EntrezGene: | BGN |
| HGNC: | 1044 |
| UniProt: | B4DQD6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@BGN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.02e-15 | 76 |
| extracellular matrix secreting cell | 1.06e-10 | 15 |
| vascular associated smooth muscle cell | 1.95e-09 | 32 |
| stromal cell | 4.60e-07 | 28 |
| skin fibroblast | 5.42e-07 | 23 |
| mesodermal cell | 7.52e-07 | 121 |
| muscle cell | 9.39e-07 | 55 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 1.29e-19 | 83 |
| vessel | 7.10e-15 | 68 |
| epithelial tube open at both ends | 1.12e-14 | 59 |
| blood vessel | 1.12e-14 | 59 |
| blood vasculature | 1.12e-14 | 59 |
| vascular cord | 1.12e-14 | 59 |
| cardiovascular system | 1.40e-14 | 109 |
| circulatory system | 1.68e-14 | 112 |
| artery | 1.99e-14 | 42 |
| arterial blood vessel | 1.99e-14 | 42 |
Showing 1 to 10 of 35 entries
